Tigriopus californicus (tidepool copepod): 131877715
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Entry
131877715 CDS
T09700
Name
(RefSeq) WASH complex subunit 5-like
KO
K18464
WASH complex subunit strumpellin
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
131877715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131877715
Membrane trafficking [BR:
tcf04131
]
Protein recycling
Others
WASH complex
131877715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Strumpellin
Complex1_49kDa
KH_PARP14_8
Motif
Other DBs
NCBI-GeneID:
131877715
NCBI-ProteinID:
XP_059079456
LinkDB
All DBs
Position
3:523423..528303
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AA seq
1173 aa
AA seq
DB search
MGLSSGMDFLADNNACGRILLRLVSRAHSTLAELLRLKEAAPTLYRNPTKAEQAKYGELI
AWDFHYFKSSEVLEHRISQNESLQLLDMDLKETYGDLLARFYRLFQSIQRYTVDLKQFLE
DLEDGAYIQQSVETVFQDPDGKQLLCESLYVLGAMLLLVDQHLEGHFRERILVAHYRYSG
QDQGQPSHVDEICQLLRSTGYSIHGKRPAHYPETLFSRVALPTQFVQMVLGRLRSDDLYH
QFQSYPLPEHRSAALAEQAAMLYVCLYFEGGGTAAVLKTESAAMREIVDKFFADNWIITY
YMGHEVNLVEAWEPYKAAKAALANTLQPSKVKELSLKSTVQIQKVMGVLRGYLKEGCLTE
DNVLEQIPKILNLIRESNVALKWRMLHTLELSQYEQQIKKCRQLRDQVLSESKHEPFQVF
QLLLYVAEFEQKFKDIYRKIWNSRESIWNTLKTEVNERLSDLALIYGGDQSTVSRRMIQK
NEKLQKWFLEQQAQVQSLALEQPLTSGRLAVQLAEAINEAMELEQLASSLQVKQSLMEIK
TRLHRLIRIAGIKEDVMIVTQIVGDISYGWRIVEQFTPFMQDGVKKDPGLVKRLRATFLK
LASALEGPVLRISQARSGDLLSVSQYYSSELVSYVRRVLQIIPESMFHLLDQIIRLQTHE
IKEVPTRLDKNKIKEFAQLAQRFQVAELTHSISVFTEGILAMKSTLVGVIKVDPKQLLED
GIRKEIVRQVSKTLHQTLMFNPKAKTCELTVKLKALKTSMSGFRRSFEYIQDYVRISGLK
IWQEELSRIILFHVEQETNVFLTQKVLPGNSVYQNKSIPIPTPPPTTNPDCQTFMGRLAN
EIILLTNPRTTVYSNALCSWYDLKTKDEVCSMGLFSLLEEAVGTIGLAGLDRLLGLKIVT
CLQNMIRYTEKTVFRDKSLIEMLENLGNSLNPTENVVAQPMKFYGYFLGRTYSLLGPVVD
ALLTLGQLQLLRQKIAYQLSLSSHFDSKILFSSLQALNQSLVSNMKVKCDREGFTKTKAL
ESPLLYELNSFLNWSGLHDPNGQIYLTTKAAPKMSELAALVFLTGLGRSKFCPNTGHLIP
KKLGDPLDGHMFVLGAQCWLQQFSDSVGTLTMAYLAQYARSFADVQSRANETLGPEVTTT
ILFLERLAAVRSQVRSAVNENLPEPLIHMIPKN
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgagttccggaatggatttcttggccgacaacaatgcttgcggtcgtatcttg
ttgcgattggtgagtcgcgctcattccaccctcgccgagttgctcaggctcaaggaagcc
gcgcccaccctttaccgaaatccgaccaaagcggagcaagccaaatatggcgagttgatt
gcgtgggatttccactatttcaagtcctccgaggtcctggagcatcggattagccagaat
gagtcgttgcaattgttggacatggacctcaaggagacgtatggcgatctcctggctcgc
ttttatcgtctcttccagagtatccaacgctacaccgtggatctcaagcagtttctcgag
gatctcgaggacggagcctacatccaacagagtgtcgagaccgtcttccaagacccggat
ggcaagcaattgttgtgcgagtctttgtacgtgttgggagccatgttgctcttggtggat
cagcatttggaaggccatttccgagaacggatcttggtggcgcactatcgctactcgggt
caagatcagggccaacctagtcatgtggatgaaatctgtcaactcctccgctcgacgggt
tattccattcacgggaagagacccgcccattacccggaaacgttattcagtcgcgtggca
ctcccaacccaattcgtgcaaatggttctgggccgtttgcgctcagatgacctgtaccac
caattccaatcctacccattacctgaacatcgatcggcggctttggcggaacaagccgct
atgctctatgtgtgtctctatttcgaaggaggtgggactgcggcggtcctcaagacggag
tcggcggccatgcgagaaatcgtggacaagttctttgctgacaattggataatcacctac
tatatggggcatgaagtgaacttggtcgaggcctgggagccttataaggccgccaaagcc
gctttggctaatacgctgcagccgagtaaagtcaaggaattaagtctgaagagtactgtt
caaatccagaaagtgatgggagttttgcggggttatctgaaggaaggttgcctgaccgaa
gataatgtcttggagcagatccccaagattctcaatctgatccgagagagtaatgtggcc
ttgaagtggcggatgttgcataccttggaattgtcacaatatgagcaacaaatcaaaaag
tgccgtcagctcagagaccaagtgttgtccgaatccaagcacgaaccattccaagtgttc
caattgctcttgtacgtggctgagtttgagcaaaaattcaaggatatctacaggaagatc
tggaacagccgggagtccatttggaataccctcaaaaccgaggttaatgagcgtctctcg
gatttggccctcatctacggcggagaccaaagcactgtcagtcggcgaatgatccaaaag
aacgagaaacttcaaaaatggttcctagagcagcaagctcaagttcaaagcctagcttta
gaacagcctctgacatcaggtcgattggcggttcaactagcggaggccatcaatgaagcc
atggagttggagcaactggcctcaagtctacaagtgaagcagagcttaatggaaatcaag
actcgattgcatcggctgatccgaattgctggaatcaaagaggacgttatgatcgttacc
caaatcgtaggcgacatcagttacggatggcgaatcgttgaacaattcacccccttcatg
caagacggagtgaaaaaagaccccggtttagtgaaacggttgcgtgcaacctttttaaag
ttggcatcagctttggagggcccggtccttcggattagtcaagccagaagtggagatttg
ttgtctgtatcgcaatattactcgtcggaattggtttcttatgttcgccgagtgcttcaa
atcattcccgagtccatgtttcatctcctcgaccaaatcatccgacttcaaacccacgag
atcaaagaggtgccaacacgactggacaagaataagatcaaggaatttgctcaattggct
cagcgattccaggtagctgaactaacacattcaatatcagtgtttactgaaggaatcctg
gccatgaagtccactttagtgggagtcatcaaggtcgatccgaaacagcttttggaggac
gggatccgtaaagaaatagttcgacaggtgtccaaaacattgcaccaaactctcatgttt
aaccccaaagccaagacatgcgaattgactgttaaattgaaggccttgaaaacgagcatg
tcgggatttcgtagatcgtttgagtatattcaggattatgtccgaatatccggtttgaag
atctggcaagaagaactcagtcggatcattctttttcacgtggaacaggaaaccaatgtt
ttcctgacccaaaaagtccttcccgggaacagtgtgtaccaaaacaaatccattcctatt
ccaactcctccacccacaacaaatccagattgccaaactttcatgggacgattggccaat
gagatcattcttctaaccaatccaagaacaacggtgtatagtaacgccctttgctcttgg
tacgacttgaaaaccaaagatgaggtgtgttccatgggactgttctcgctcctggaagaa
gctgtgggcacgattggtttggcgggactggatcgattactggggctaaagatcgtcacg
tgtttgcagaatatgattcgatacacggagaaaaccgtatttcgggataagtctttgatt
gagatgctagagaatctgggcaacagtcttaatccaacggagaacgtagtagctcaaccc
atgaagttttatggctatttccttggcagaacctatagccttctgggacccgttgtggat
gccttgctgacattgggccaattgcaattattgcgacaaaagatcgcataccaattgtct
ttgtcgtctcattttgattcgaaaatccttttctcttcccttcaagccttgaaccagtct
ttggtatcgaacatgaaggttaaatgcgacagggagggtttcacgaaaaccaaagcattg
gagagtcccttactttatgaactgaactcgttcctgaattggtcaggtctgcatgatccc
aatgggcagatttacttgacaacaaaggcggctcccaaaatgtcggaattggcagcattg
gttttcctgaccgggttgggtcgatctaaattttgccctaatacaggtcatttgattccc
aaaaagttaggggatcccttagatggacacatgttcgtccttggagcccaatgttggctc
caacaattttccgactcggttggtaccctgactatggcttacttggcacaatatgctcga
tccttcgcagacgtgcaaagccgagctaatgagaccctggggcctgaggtaacgactacc
atcctgttcctggaacgtctcgctgcggtcagatctcaagtgcggtcagcagtgaatgaa
aacttacccgagcctctgattcatatgattcccaaaaactga
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