Tigriopus californicus (tidepool copepod): 131877716
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Entry
131877716 CDS
T09700
Name
(RefSeq) staphylococcal nuclease domain-containing protein 1-like
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
tcf
Tigriopus californicus (tidepool copepod)
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNase
TUDOR
DUF5870
Motif
Other DBs
NCBI-GeneID:
131877716
NCBI-ProteinID:
XP_059079457
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Position
3:complement(543949..548497)
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AA seq
924 aa
AA seq
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MSAAAEAGGNTADNNNAAPPKQFFSGICKQVLDGGTVIIRGQPRNGPPPERLLALAEIEA
PRLARRPGPNNAATEDEPFAWQAREFLRQMLVGKPLLGSVSYTVPSGREFGTVLVGSTDP
EKGENVALKLVAEGLARVRENSSDATLKEAQEAAKAAGKGVWSSDSSVGVRKITWDLETP
RQLVDQMGGKPVKAIIEHVRDGTTVRAFLLPDFYHITLMLSGVRAPSVRMGSDGKPDPTT
AEKYALEAHYFTESRLLQREIEIILESVNNKNFVGSIIHPNGNIAEALLREGFAKCVDWS
LQCVTGGPEKYRKAQADAKEKKLRLWKDFAGPTGPVISEKDKTFTGKVIEIVNGDAVMVK
RSKNDVKKIHLASIRPPRLGGPGEAGKTAERPKAPGGGPFRPLYDIPFMFEAREFLRKKL
IGQSVHVTIDYIQPANNDFPEKHCATVTIGGVNVAEALVTKGLATVVRYAADNDQRSSAY
DDLLAAEDKAIKSTKGMHDKKNIPTRRIADISGDVAKSKQFFPFLQRAGRMQCVVEFAAS
GSRFRVYIPRETCVITLLLSGVSCPRASRNMPGGQSSAGEPFGDEALAFVKEMALHREVD
IEVEAMDKGGNFIGWMHTEGKNVSVELVENGFASAHPTADRTNYGREIAAAEENAKRRRE
KIWANYNEEQEKAAAQAQLDLAQEDDEKKDDEDRKVHYIKVCVTEVTPEAKIYAQHVEEG
PKLEQLMKEIRNEFSSNPPLAGAYQPKKGDICAAKFVDDQWYRAKVEKVTPNDVSVLYMD
YGNRSTIAKTKVGSLPSSFNALTPFAKEYCVALAKLADDDEYRDLGLQAMREDFLDKTLN
LNVEYRVGGIPYVTLSEPSTNEDLVKNLVGEGLLLTEKKGGRKLAKLVNAYLEAMESAKK
KHLNIWEYGDITGDDAREFGVGNR
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgcggcggaagcaggcggcaacaccgcggataacaacaatgcggctccgccc
aagcaattcttctccgggatctgcaagcaggtattggatggtggcaccgtgatcatccgc
ggtcaaccccggaatggtccacccccggagcgactcttagctttggccgaaatcgaggca
cctcgtttggctcgccggcctggtcccaacaacgccgccactgaggacgagcctttcgct
tggcaggcccgcgagttcctccgtcagatgttggtgggcaagccgctattgggctcggtc
agctacaccgtgccctccgggcgtgagttcggtacggtcttagtgggctccaccgatccc
gagaagggcgagaacgtggccctcaagctggtggccgaaggattggcccgcgtgcgcgaa
aactcctcggatgccaccttgaaagaggctcaggaagcggccaaggcggccggcaagggt
gtgtggtcgagtgatagctcggtgggagtgcggaaaatcacctgggacctggaaaccccc
cggcagctggtggaccagatgggcggtaaaccagtgaaggccataatcgaacacgtgcgg
gacggcaccacagtgcgggcgttccttctacccgatttctatcacattacgctcatgttg
tccggcgtgcgagcacccagtgtgcgaatgggaagcgatggcaaacctgacccgactacg
gccgagaaatacgccctcgaggcccactatttcaccgagtcacggctccttcaacgcgag
atcgagatcatcttggaatcggtcaacaacaagaactttgtgggtagcatcatccatcct
aatggcaacattgccgaggccttgttgcgcgagggctttgccaaatgcgtggattggtcc
cttcaatgcgtgaccggcggtccggaaaagtaccgcaaagcccaagcggatgccaaagag
aagaaactccgtctttggaaagattttgccggacccacgggtcccgtgatcagcgaaaag
gacaagaccttcactggcaaggtcatcgaaatcgtcaacggcgatgccgtcatggtgaag
cgaagcaaaaacgacgtcaagaagattcatctggcctcgatacgcccacctagactaggc
ggcccgggcgaggctggcaagacggccgagcggcccaaggccccgggtggtggccctttc
cgacccctctatgacattcccttcatgtttgaggcccgagaattcctccgcaagaagttg
atcggtcaaagtgtccatgtgacgattgattacatccaacccgccaataacgatttccct
gaaaaacattgcgccacggtcaccattggaggtgtgaacgtcgccgaggctctggtgacc
aaaggtctggccacggtcgtgcgatatgccgctgacaacgatcagcgaagctcagcttac
gatgacctcctggccgccgaggataaggctatcaaatcgactaagggcatgcatgataag
aaaaacattcccacccgtcgaatcgctgacatttcaggtgacgtggccaagagcaaacaa
ttcttcccattcctccagcgagctggtcgcatgcaatgcgtggtcgaattcgcggcatct
ggatcgcggttccgcgtctacattccaagggaaacttgcgtcatcacgttgttgctctcc
ggcgtgagttgtcctcgcgcctcccgaaacatgcccggaggtcaatccagtgcgggcgag
ccatttggcgatgaagccttggcctttgtcaaagaaatggctcttcaccgtgaagtcgac
atcgaagtcgaagccatggacaaaggtggcaacttcattggatggatgcacacagaaggc
aaaaacgtatccgtcgaactggtcgagaacggattcgcctccgctcaccccacggctgat
cgcacgaactatggtcgcgaaatcgccgccgccgaagagaatgccaagcgccgtcgggag
aaaatctgggccaattacaatgaggaacaggagaaggccgccgctcaagcccaactcgat
ctggctcaggaggatgacgaaaagaaggatgacgaggaccggaaagtacattacatcaag
gtctgtgtcacggaagtaacgcccgaagccaagatctacgcccaacacgtggaagaggga
cccaaattggagcaactcatgaaggagatccgcaacgagttctcctccaacccacctctg
gccggagcctaccaacccaagaaaggtgatatttgtgcggccaagttcgtggatgaccaa
tggtaccgtgccaaagtagaaaaggttacacccaatgacgtgagcgtgctctacatggat
tacggcaaccgctccaccatcgccaaaacgaaagtgggcagtcttccgtcgtccttcaat
gccctcacgcccttcgccaaggaatactgcgttgccttggccaaattagccgatgatgat
gagtacagggacctaggtctacaagctatgagagaggacttcttggacaagacattgaac
ttgaacgtcgaatatcgcgtgggcggaatcccgtatgtgactctgtccgagcccagcacg
aatgaggatctagtgaagaacctggtgggcgagggcctcctcctcacggaaaagaagggc
ggacgcaaattggccaagttggtcaacgcctacctggaagctatggagagtgccaagaag
aagcatctcaacatctgggaatacggagacatcaccggagatgatgctcgagagtttggc
gtgggcaatcgttaa
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