Tigriopus californicus (tidepool copepod): 131877777
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Entry
131877777 CDS
T09700
Name
(RefSeq) crossover junction endonuclease MUS81-like
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03440
Homologous recombination
tcf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131877777
03460 Fanconi anemia pathway
131877777
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcf03400
]
131877777
DNA repair and recombination proteins [BR:
tcf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
131877777
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
EME1-MUS81_C
HHH_8
UBA_RNF216
Motif
Other DBs
NCBI-GeneID:
131877777
NCBI-ProteinID:
XP_059079542
LinkDB
All DBs
Position
3:complement(11102101..11106159)
Genome browser
AA seq
707 aa
AA seq
DB search
MAQIKKRRKIQISNPNPVFENALQYLIESNADDLVMVKKYEECLLSLKKYPLKLNNLSHC
KVLSGFDQTVIDAMQMQWITPKAAILSPIRSSVIPPKLQTTKTEYVLPISESKENDPDIE
LAKQISMENVSDEPPKLNFDEDESDPDLVLARQLSQEWNGVSTAMDLPPFKQQQEQQEED
RMLALKLNQDNYMNRSWSAPEVGLRRASSQFETELEGELTSKRVSGVIGGFRIPVINPNE
VEITPPPSLAKEISQAVPKSKTSLSARAKLFSQDPILRRGTDDGFDLDDGDDSIMAQIGQ
NTSISKPWVDPSKVERNFHSISDSDEDEPAILPPKPSRSKNPVKSAKAVKGEKRKCSKKK
TGVEFIPESSIPKWVMDLRSPQLIDTEEDIGQEDDHPSEFTLPSGEYEIVLIVDFAEVTG
GGGGKARGTSNKKATALKELTANGVSHETRKLHVGDFIWIAKEKVTVDPSRLSQREPREL
VLPYIVERKRMDDLKNSIIDGRYKEQKTRLRDCGLPYRWYLVEEFNKKMKYWANGANGQK
FNLQALEQAMASTSAVEGFNIKRTEDLKESVAFLTLTTRFLQDKYCHATLRSWTHQDLDL
NIVHDADHVLLSFKEFNDNSRKNKPLTVKDGFTRILCCQHGVTWPMASAIADEYSTLANL
MEVYANCQNSEERENLLAGLSFEGGKRLISAQVSKIISWLFSDEQLK
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaattaaaaaacggcgtaaaatccaaatttcgaatccgaatccggtttttgaa
aatgccttgcaatatttaattgaatcaaatgccgatgatttggtaatggtcaagaaatat
gaagaatgtttgttgtctttgaaaaaatatccgctgaaactgaataatttaagtcactgt
aaagttctgtctggtttcgatcaaacggttattgatgctatgcaaatgcaatggattaca
cccaaagcagcaatattgtcaccaataagatcatcagtgattcctcctaaactccagacg
acgaagacagaatacgttttaccaatcagcgaatccaaggaaaatgatccggacattgaa
ttggccaaacaaatatccatggagaatgtctctgatgaaccccccaaactcaatttcgat
gaggatgaatccgatccagatctagttttagcccgccaattgtctcaagaatggaatggc
gtttccaccgccatggatttgccaccattcaaacaacaacaagaacagcaagaagaggat
cggatgttggccttgaaattgaatcaggacaactacatgaatcgatcctggtcggctccc
gaagttggattacgaagagcttcgtctcaatttgaaacggagctcgaaggggaattgaca
tccaagcgagtatccggggtaattggtggctttcggatccctgtgatcaatccgaatgag
gtcgagatcacacctccgccatccttggccaaagaaatatcccaagctgtccccaagagc
aagacctcgctctctgctcgagcgaaattattttctcaggaccccattttgagacgcgga
actgatgatgggtttgacctcgatgatggagatgactcgattatggctcaaattggacag
aacacatctatttctaaaccgtgggtggatccttccaaagtggaaaggaactttcactca
atcagtgatagtgacgaggatgagcctgcaatcttgccaccaaagccatccagatccaaa
aacccggtcaaaagcgccaaagcggttaaaggcgagaaacggaagtgctccaaaaagaaa
actggggtagaattcatcccagaaagcagcatccccaaatgggtgatggatctaagatcc
ccgcaattaattgacactgaggaggatattggccaggaagatgatcacccatctgaattt
acccttccctccggagaatatgaaatcgtgttaattgtggactttgcggaggtcacgggt
gggggaggcggaaaagcccgtggaacatcgaacaaaaaggccacggctttgaaggagctc
acggccaacggagtgagtcacgagactcggaaattgcatgtcggggacttcatttggatt
gccaaggaaaaagtgaccgtggatccgtctcgtctaagtcagagagaaccccgggaactt
gtcttgccttatattgtggagcggaagcggatggacgatctcaagaattcaatcatcgat
gggcgttataaagaacagaagacgcgcttgcgggattgcggcctgccctatcgatggtat
ttggtggaagagtttaataagaagatgaaatattgggccaatggcgccaacgggcaaaag
ttcaacttgcaagctcttgaacaagccatggcctcaacatccgctgtcgaagggttcaac
atcaagcgaacggaagacctgaaagagtccgttgcttttctaactttgaccacccggttt
ctccaagataagtactgtcacgccaccttgcggagttggacccaccaagatttggatctc
aacattgtccatgatgccgatcacgtccttctctctttcaaggagttcaatgacaactcc
aggaaaaacaagcccctaaccgtcaaagatggattcacccgaatcctttgctgccaacat
ggcgtgacttggcctatggcttcggccattgccgatgaatattcaaccttggccaacttg
atggaagtctacgccaattgtcagaactcggaggagcgtgagaacctccttgccggttta
tcgtttgaaggcgggaaacgtttgataagtgctcaagtctccaagatcatttcgtggttg
ttcagcgatgaacaattgaaatag
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