Tigriopus californicus (tidepool copepod): 131877790
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Entry
131877790 CDS
T09700
Name
(RefSeq) tubulin polyglutamylase TTLL5-like
KO
K16602
tubulin polyglutamylase TTLL5 [EC:
6.3.2.61
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tcf03037
]
131877790
04812 Cytoskeleton proteins [BR:
tcf04812
]
131877790
Enzymes [BR:
tcf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.61 tubulin-glutamate ligase
131877790
Cilium and associated proteins [BR:
tcf03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
131877790
Cytoskeleton proteins [BR:
tcf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylases
131877790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTL
ATPgrasp_YheCD
ATPgrasp_ST
DUF1890
COG6_N
Motif
Other DBs
NCBI-GeneID:
131877790
NCBI-ProteinID:
XP_059079561
LinkDB
All DBs
Position
3:complement(10351291..10355611)
Genome browser
AA seq
1092 aa
AA seq
DB search
MEDISEIGDDSKKYLEVSSEISSSSDSDVDSKDGVLEILRKVSLDSGIQSSPNGSTSSID
EEDNHTKVSKNVEQIEALLKRINEENRKTKEVLSSIHNGTTPLLETTTNVMLSRTNVISL
GRKAKNDDLQVTKDLPIGTRSKAEEPYYYETSIEGKKIPIVPFNCMTLSTPPTQTLGQKH
RLSFKTVNAEAKLVSQICHAHGFHEVHSNNTDFNLMWTGVHPKPHSFKSLLPHQRVNHFP
RSYELTRKDRLYQNIERLQHAKGAKNFNFVPKTFMIPTEYSEFAATHHRMRGAWIVKPVA
SSRGRGIFIVNHPNQVPLDEPMVVAKYIDNPLLVNGHKWDLRLYVAVTSYDPLMIYLYEE
GLVRFATVRYDSTGKNLWNPCMHLCNYSINKYHSDYIKCDDPDQEDQGHKWSLSALLRHL
KANNIDTVQLMQTIEDVIIKSIISVEFPVNSACKMFIPHKRNCFELYGFDILIDSELKPW
LLEVNLSPSLNCDAPIDLKIKSAMMCDLLSLIGLPAVDPVLKRAQFNRKVNELTSNLAAN
DESKANKSGSSTANIKEPMAAASTRRSVSIETRRFAAIRLASSSISYSQELARMVRNARE
ENQRRGGWVRVFPTADTWQNYGSILEYSSQNNLILHEHLYPNAVKKAQRQSKRGPNPKSY
DFFRKRSQSMGPTRLDRDKSLNFTDLNFDKSINGRKSKKTSPIPPTEGSEPDSQTSPTPI
SLPSKPTPSELRVAQYEKPLMKGHKAKAVLVKTKKDPEKVAKKRSEKRQRSGVLKDKIIK
MIESGLQLSEYQSRKAFSVYLHCILQRLSDFDVDNGSDLGQIDLVLKFLQKAALSLREPY
FLKAPSIKLSGKDRAAIVAKELNEFLGHYRRETDLYTAFKEESGMIPRHTFEEFIAFAND
TDLEEVLTLQTKLYRCAHIFLGKCLPPVSGRKNSLLRTAYGISPDRNLRDRQCTMRINAR
ANPPMAPQFKLPPQQPLNCLNISTYEKSKLEELEEDTMYNNVRIGLMVKKSMLGFKRETV
DRCVLDLDNSSPSPADPRLTVLTEAFPTVNKTGSMKAEVNGKTENDHLLRVSSAPSELGE
NLLSCSEVDELL
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atggaggacatttctgagattggagatgactcgaaaaagtacctggaagtctcgtctgaa
atctcgtcttcgagtgacagtgatgtggattctaaagatggtgttctagagatcttgagg
aaagtctctttagattctgggattcaaagcagtcctaatggatctacctcttcaatcgat
gaggaagacaaccataccaaggtatcgaaaaatgtggaacaaattgaggctttactgaag
aggataaacgaagagaatcgaaagaccaaggaagtactgagctcgattcacaatggaaca
actcctcttctggagactacgaccaatgttatgttatcacggacaaacgtgatttccttg
ggacgaaaggccaaaaatgacgatcttcaagtgacaaaggatctccccattgggactcgg
tcaaaggcggaggaaccctattattacgaaacgtccattgaagggaaaaagatccccatt
gttccattcaactgtatgaccttatccactccgccaactcaaactttgggccaaaagcat
cgtctcagcttcaagacagtcaatgctgaagccaagttggtgtcccaaatttgccatgct
catggctttcacgaagttcactccaacaacacagatttcaatctcatgtggaccggtgtt
cacccaaagccacattctttcaagtcgttgctccctcatcaacgagtgaaccattttcct
cgctcctacgaattgacacgaaaagaccgtctctatcaaaacattgaacggcttcaacat
gccaaaggagccaagaatttcaattttgttcctaagaccttcatgatcccgactgaatat
agcgaattcgctgccactcatcaccgcatgagaggggcttggatagtgaagcctgttgcg
tcctccaggggtagaggtatcttcattgtgaatcatcccaatcaagtccctttggacgag
cctatggttgtggccaagtacattgacaatcccctgcttgtcaatgggcacaaatgggat
ctccgattgtacgttgcggtgacgtcgtatgacccacttatgatttacctttacgaagaa
ggtctggtacgattcgctacagtgcgttatgattccacgggcaagaatttgtggaaccct
tgcatgcacttgtgtaactacagtatcaacaagtaccattcggactacatcaaatgtgat
gacccggatcaagaagatcaaggccacaaatggtctctgagcgctcttctccgtcacctg
aaggccaacaatatagatacggtccaattgatgcaaaccatcgaggatgtgatcatcaag
tcaatcatatccgtcgagttccctgtgaatagtgcttgcaagatgttcatccctcacaaa
cggaattgcttcgagttgtatgggttcgacattttaattgattcagagctgaagccttgg
cttttggaggtaaacctctcgccgtccctgaactgtgatgctcccattgacctcaagatc
aaatccgccatgatgtgcgaccttctcagtttaattggacttcctgccgtggatccagtc
ctgaaaagagcccaatttaaccgaaaagttaacgaactcacctcaaatttggcagcaaat
gacgaatcaaaagcaaataagtcgggctcttccactgccaatattaaggagccgatggca
gccgcttccactcgccgcagtgtctccatagaaaccaggagatttgcggccatccggttg
gcttcttcttcgatatcctattctcaagagctagctcgaatggttcgaaatgctcgtgag
gagaaccaaaggcgaggtggatgggttcgggtattcccaacagcagatacctggcagaat
tacggctccatcttggaatacagctcacaaaacaaccttattttgcatgaacatttgtat
ccaaacgctgtcaaaaaggctcagcgacaaagtaaacgtggccccaatccgaaaagttac
gacttcttcaggaaacggagtcagtccatgggccctacgagattggatcgggacaagtca
ttaaatttcaccgatctcaattttgacaagtcaatcaatggacgcaagtccaagaagacc
tcgcccatcccgccaaccgaaggctcggagcccgactcacaaacatcaccaacaccaatc
agtcttccgagtaagccgactccaagtgagcttcgagtggcacaatatgaaaaacccttg
atgaaaggacataaggccaaagctgttttggtgaagacgaaaaaagaccccgagaaggtg
gccaagaagcgatcggaaaagcgtcaaaggtcaggggtactgaaggacaagatcatcaaa
atgattgagagtggcctgcagttgagtgagtatcagtcccggaaggcgttctccgtgtat
ctgcattgtattctccagcgactctctgactttgacgtggataatggttctgaccttgga
caaatagacttggttctcaagttcttgcaaaaggctgcattgagtcttcgtgagccctac
ttccttaaggcccctagcatcaaacttagtggcaaagaccgagctgccatcgtggccaag
gaactgaacgagtttctaggtcattaccgacgagaaacggatctttacacggccttcaag
gaagagtctggtatgattccacgacacaccttcgaagagttcatagccttcgccaacgac
acagatctggaggaggttctcacattacaaaccaagctctatcgatgtgcccatatattc
ttggggaagtgtcttcccccagtttctggtcggaagaactcacttcttcggaccgcttac
gggatcagtccggatcgaaacctccgagatcgtcaatgtacgatgaggatcaatgcccgt
gccaatcctcccatggcaccgcaattcaagctcccacctcagcagcctttgaactgctta
aacatctccacctatgagaaatccaaattggaagaacttgaagaggacaccatgtacaac
aacgttcgcattggtctgatggtaaagaagtcgatgctgggcttcaagagggaaactgtg
gatcgatgcgtgctagatttggacaacagctccccgagcccagcagatccaaggttgaca
gtattaacagaagcgtttccgaccgtcaacaaaactggctcaatgaaagcggaagtgaat
gggaagactgagaacgaccaccttctgcgtgtttcttcggctccatctgaattaggagag
aacttattgtcgtgctccgaggtcgatgagctcctttaa
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