Tigriopus californicus (tidepool copepod): 131878040
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Entry
131878040 CDS
T09700
Name
(RefSeq) protein mac-1-like
KO
K14571
ribosome biogenesis ATPase
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
131878040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcf03009
]
131878040
Ribosome biogenesis [BR:
tcf03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
131878040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Nucleolin_bd
AAA_lid_3
AAA_16
AAA_33
RuvB_N
TIP49
AAA_22
AAA_5
AAA_2
AAA_28
AAA_17
RNA_helicase
NPHP3_N
AAA_14
AAA_18
ABC_tran
Mg_chelatase
nSTAND3
Rad17
AAA_7
NB-ARC
IstB_IS21
TsaE
Sigma54_activ_2
DUF6538
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
131878040
NCBI-ProteinID:
XP_059079924
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All DBs
Position
3:complement(355129..359155)
Genome browser
AA seq
959 aa
AA seq
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MADFIPLVAAGSATWGAGSSTGKKKKRHRLSNATASPPSGTPVGRQAAPTPQEGGRPFRR
GPSGGGTGGSGGGSEAQKLKSRIRDFLEAHKNQPYIDIDGMATSLHTRYPEYARRKVRDF
HRQVENTFERLQSEAVATLSQPTPAPLRPEDSAPPTAPPDSMDVGVSMSATLNGLYKGVV
SAPPSPAPPRPVHDDITILDDEITVLDDDQLVMAASHSTARRKAGSSPLKRASAPTPARL
KTESNIEEEAVEGAGSKSTRKVRRKEEPLKIGISPRTLADVGGVDAIIQDILQMTRHLKC
PQFFRQLSVLPPRGCILHGPPGCGKSLVAEAISGELQIPMIRVSGTELVSGVSGESEAKI
RDVFEQAGRHAPCLLFIDGIDVIAKKRENAQRDMEMRIVSQLLSSMDELNRQDQVAAAAA
AATTTATTTANGSEPNQPPGDRGHVFVIGATSRLDTLDPALRIGERLEREIALGIPDEKA
RLHILTVMCQSFQLGDDFDLPLLARLTPGYVGSDLKGLIKAAASFAEDRHFKALAETYTS
LYNLTNEPQMDREQLFQWCNESEAAKARLPELKITFSDFQAALKVVQPSALREGFATVPN
VSFEDIGALDEIREELEMAVCAPVNDPEMIARLGMDGPSGVLLCGPPGCGKTLLAKAVAN
QAGINFISVKGPEIINMYVGESERAIRQVFQRARNSAPCVIFFDEIDSICPRRSGSDGGS
GSNRVVNQLLTEMDGVEGRQGVYVMGATNRVDMLDPAILRPGRLTNHFFVDLPVTAHFRF
KEYCQARKSGLLDGIKPEEITVASRHXADRTPGFSGADLGKLVLRAAHFRFKEYCQARKS
GLLDGIKPEEITVASRHFHMALSVVKPSVSGLEKKKYDQMKRKYGSVGEDFPEPSPVQPL
ADPQLLGDSVMDTTATPVTTKGMFNRESTHVIPTIVEPSRLNGTTGNEDSIRTHQPIPL
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggcggatttcattcctttagtcgccgccggttccgccacctggggggcggggtccagc
acgggcaagaaaaagaaacggcaccgattgtcgaatgccacggcctctccgcccagtggg
accccggtgggacgccaggccgcccccacgccccaagagggtgggcgacccttccgacgg
ggtccgagtgggggcggaaccggcggcagtgggggtgggagcgaagcccagaaactcaaa
agtcgcatccgagacttcttagaggcccataaaaatcagccttacatcgacatcgatggc
atggccacgtcgcttcacacgcgatatccggaatacgctcgccgaaaggtacgcgatttt
caccgccaagtcgaaaacactttcgaacgacttcagagcgaggccgtagccaccttgtcg
caaccgaccccggctccgctccgccccgaggactccgccccgcccactgccccgcccgac
tccatggacgtgggtgtctccatgtcggccacgctcaatggactgtataaaggcgtggtc
agcgctccccccagcccggcccccccgcgacccgtccacgacgacatcaccatcttggac
gacgaaatcaccgtgctcgatgacgatcagctcgtcatggccgccagccatagcacggct
cgccggaaagccggatcgtcacccctcaaacgcgcgtccgcccccacgccagcccgtttg
aaaactgaatccaatatcgaggaagaggccgttgaaggcgccgggtccaagagtacccgt
aaagtcagacgcaaggaggagccattgaagatcggcatctcgcctcgcacgctagccgat
gtaggcggagtggacgcgatcattcaggacatcttacaaatgacccgccatttgaagtgt
ccccagttctttcgacaactctcggtcctgcctccacgcggttgtattttacacggtccg
ccgggttgcggcaaaagtttagtggctgaggctatttccggcgagctccagattcccatg
atccgggtgagtggcacggaactggtgagtggcgtgagcggcgaatctgaggctaagatt
cgggacgtatttgagcaggccggtcgccatgcgccttgcttgctcttcatcgatgggatc
gacgtgattgccaaaaaacgcgagaatgctcaacgagatatggagatgcggattgtgtct
caattgttgagctccatggacgagttgaaccgacaggatcaagtggccgccgccgccgcc
gctgccaccaccactgccaccactactgccaatggaagtgaaccgaatcagccacctggt
gatcgaggccatgtgttcgtcattggagccaccagtcgattggatacattagacccggct
ttgaggatcggcgagcgactcgaaagggagattgcgttgggcattccggatgaaaaggct
cgactacatatcttgactgtcatgtgccaatcgttccaactgggcgacgattttgatctg
cccttgttagcgcgattgaccccgggttatgtgggctccgatctgaagggactgatcaaa
gccgccgctagttttgccgaggatcgccatttcaaggccttggctgagacctacacatcc
ttgtacaatttgacaaacgaaccccagatggatcgtgagcaactgttccaatggtgcaac
gagagcgaggctgccaaagcccgcctacccgagctcaagatcacgttctcggatttccaa
gcagccttgaaagtcgttcaaccctcggcgcttcgtgaaggcttcgctaccgtgcccaat
gtcagtttcgaagacattggcgccctggatgagatacgagaggagctcgagatggccgtc
tgtgcgccagtcaatgaccctgagatgattgcccgactaggcatggatggcccatccggg
gtcttgctttgtggtccaccgggttgcgggaaaactctacttgctaaagccgtggccaac
caagccggcattaatttcatctccgtcaaaggccccgaaatcatcaatatgtatgtaggc
gagagcgagcgggccattcgtcaagtgtttcaacgggcgcgcaattccgcgccctgtgtc
atcttcttcgacgagatcgactcgatctgtccccggcgaagcggatctgatggcgggagc
ggctcaaaccgtgtggttaatcagctgctcacggaaatggacggcgtggaaggacgtcaa
ggcgtgtacgtcatgggcgctacgaatcgcgtggacatgctcgacccggccattctacga
ccgggtcgtctcaccaatcatttcttcgtggacctgccggtaacggcgcatttcagattc
aaggagtattgccaagcccggaaaagcggactactcgatggcataaaacccgaagaaatc
accgtggcctccagacacntggccgaccgcacgcccggttttagtggcgccgatctaggc
aaacttgttctgcgagcggcgcatttcagattcaaggagtattgccaagcccggaaaagc
ggactactcgatggcataaaacccgaagaaatcaccgtggcctccagacactttcacatg
gccctgtccgttgtgaaaccttccgtgtcaggtttggagaagaaaaagtacgatcaaatg
aaacgcaaatacggctctgtgggtgaggattttccggagccaagtcctgtccaacctttg
gccgaccctcagcttttgggtgatagcgtcatggacaccactgccactcctgttacgacc
aaggggatgttcaatcgcgaatctacccatgtgataccgactatcgtcgagccatctcga
ttgaacggaacgacggggaatgaagattccatacgaacccatcaacccattccactctga
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