Tigriopus californicus (tidepool copepod): 131878059
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Entry
131878059 CDS
T09700
Name
(RefSeq) protein Red-like
KO
K13109
IK cytokine
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcf03041
]
131878059
Spliceosome [BR:
tcf03041
]
Complex B
Other components
Complex B specific factors
131878059
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GFIT
Motif
Pfam:
RED_N
RED_C
Lsm_interact
Motif
Other DBs
NCBI-GeneID:
131878059
NCBI-ProteinID:
XP_059079943
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All DBs
Position
3:9239526..9245397
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AA seq
608 aa
AA seq
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MPEHEFLAPGSELHGSGHRHEPASQRMTNEDFRKLMMTPRGGSGSTSSVGATPTLGSGMM
ATPVRGGGAAGAAPRPAQKVSSNNEKAENRKKKKSYYAKLKKEEDDQLALLAAKYRDRAK
ERREGGVGVGGVVGSEEGAAGLEGAMAPVNDEIASSTSGYRAVGPDFKSSFDAAEARRQK
IHESKFLGGDMEHTHLVKGLDFALLQKVRSEIANRETEGPVKVEPVEDVEEEKKEEAAIG
KLAHPEDELQSQCRTAMGKNIVRSLFNPNYPKSNELFFPGRMAYVMDLEEDFGESDIPTT
TIRSKADVEGTVANQTTLSTNDIVINKLTQILSYLRAGKSNKKKKKDKLIQMDKEELKEM
RAQQAASAANLPIYDDVGDYVADTRKRKDHRDDRHRDRDRRDRDRGGRDRRDRERERGRD
RDRDRPEDRGGRERDGKRNYFEKDPNEEEETENFKGGLTHQDKDYIRKLGERERDKSKRK
VDAAKGGVGLETNYDGYAECYPGLEEMNDAIDDSDDEADYSKMDLGNKKGPVGRWDFDTA
EEYAEYKSKQEALPKAAFQYGVKMTEGRKTRGKVGPKNEKAKLDREWNQISALIDKRKTS
GPKKPRLE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacacgagttcttggcgccgggttctgagctccacgggagtggtcatcgtcat
gagcccgcctctcaacgcatgaccaatgaagatttcaggaagcttatgatgacaccccgg
ggtgggagtggcagcacatcgtccgtgggtgccacgcccaccttgggctcgggcatgatg
gccaccccggtgcggggtggaggagccgcgggggccgcccctcgtccggctcaaaaagtg
tcttccaataatgagaaagccgaaaatcgcaagaagaagaaatcctattacgccaagtta
aaaaaggaagaggacgaccaattggccttgttagcggctaagtatagagaccgagctaaa
gagcgacgggagggaggcgtgggagtgggcggggtagtggggtcagaggaaggggccgcg
ggactggaaggggctatggctccggttaacgatgaaatcgcctcgtcgaccagtgggtat
cgggcggtgggaccggattttaagagctcgttcgatgcggctgaagcccgacgacaaaag
attcacgaatccaaattcttgggtggtgacatggaacatactcatttggtgaaaggtttg
gatttcgctttgttgcaaaaggtccgtagcgagattgccaatcgagaaaccgaaggtcca
gttaaagttgaacccgtagaagatgtggaagaagagaagaaagaagaggcggccattggt
aaattggcccatcctgaggatgagctccaaagtcagtgtcgtacggccatgggcaagaat
attgtcaggtccttgttcaatccgaattaccccaagagcaacgagttattcttcccgggt
cgaatggcgtacgtcatggatttggaggaagattttggggagagcgatattcctaccaca
actattcggagtaaggctgatgttgaaggcacggtggctaatcaaaccacactctccacc
aacgatatcgtcatcaacaagttaactcagattctgtcctatttgagagctggaaagtcg
aacaagaagaaaaagaaagacaaactcatccaaatggataaagaagaactcaaagagatg
cgagcccaacaggccgcttctgccgctaatttgcctatttatgacgatgtcggtgattat
gtggcagacacccgaaaacggaaagatcatagagacgatcgtcatcgagatcgagatcgt
cgtgatcgggaccgtggaggccgagatcgacgcgaccgtgagcgagagagaggtcgagat
cgagaccgggatcgtcccgaagatcgaggaggccgagagcgcgacggcaaacgaaactac
ttcgaaaaagaccccaacgaagaggaggagaccgaaaacttcaaaggtggattgacccat
caggacaaagattacatccgaaaattaggcgaacgagaacgtgacaaaagcaagcggaaa
gtggatgccgccaaaggcggcgttggtttggaaaccaactacgatggttatgccgagtgt
tatccgggtttggaggagatgaatgatgctatcgatgacagtgacgatgaggccgactac
tcaaaaatggacctaggcaacaaaaaagggcccgtggggcgatgggactttgacacggcc
gaggaatacgccgagtacaagtccaagcaagaggctttgcctaaagccgctttccaatat
ggcgtgaaaatgactgaaggtcgaaaaacgcgtggcaaagtcggtcccaagaatgagaag
gccaaattggaccgggagtggaaccaaatctctgccctcatcgacaagcgaaaaacctca
ggcccgaaaaagcctcgactcgaataa
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