Tigriopus californicus (tidepool copepod): 131878229
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Entry
131878229 CDS
T09700
Name
(RefSeq) eukaryotic translation initiation factor 5B-like
KO
K03243
translation initiation factor 5B
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
tcf03012
]
131878229
Translation factors [BR:
tcf03012
]
Eukaryotic type
Initiation factors
eIF-5
131878229
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
MMR_HSR1
GTP_EFTU_D2
ATP_bind_1
Roc
Ras
AAA_22
Motif
Other DBs
NCBI-GeneID:
131878229
NCBI-ProteinID:
XP_059080129
LinkDB
All DBs
Position
3:7967151..>7970208
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AA seq
1160 aa
AA seq
DB search
MGKKPKKPVSVSSEEELSGMSSSEEEQVVTKKKAPAPQKKSNPKMDDTESDSEGEAKKVE
VKKSAFALLMDDDDDNDSESEASASDSDDPPEPIEKKKPAPVKSAKAEPAAPAKGGKKGK
KKRAKNDDDEEDLDQLLEELKLEYQGQKPADGGKEEASDAQPSATQAKSKKAAKKSAQAN
AEDDDDDEDDDDDEGDEGGTVKTAAQKRKEKKERQKQKLAAQKANQAKQKAKTQKPQGET
EVKKVEKIDDVKKPVVEVKKSNDSSKVAEDLPDGDAKAAELPENEPEDEGGKKKKKKGEK
EDPKKKGKKPGKGTLAAMQEALKKVQEEEERLRREEEEKIRLEEEAERERLEKKKLEQEK
KEAKKLREREKREQLRKEGKLLTAKQKAEKARAEAMLEAMREHGFEVPKIGEKKAARPGT
RIRVKKEKTPAHDASKETTPDSETKPDMPATDPLEPEKKEDPVEEVADSWEETAEALDNW
EEALIEDDKEEEGPKKATKETSPASTSKKGDGSEDDAEDDDDENDNEDDDEESEDEEEDQ
NEAEKRRERAMIRIKKRQEDNEENRTVDELRAPVVCVLGHVDTGKTKILDKLRRTHVQDG
EAGGITQQIGATNVPIEVIKEQCKMVKNFNSNLKLPGLLIIDTPGHESFSNLRDRGSSLC
DIAILVVDIMHNLEPQTIESINLLKKKKTPFVIALNKIDRLYEWKPNRHKDVQEVIESQQ
QNTKLEFQKRSQEVIIAIAEQGLNAALYYDNPDPKTYISMVPTSAHSGDGMGNLMGLLVQ
LSQTMLAKRLAFSEELQATVLEVKAIPGLGTTIDIVLVNGSLKEGQTMILAGTDGPIVTP
IKALLTPAKMQDLRVKNTYIEHKEIRAAQGVKISAKELEKAIAGLNLLVAYHPDEVDICR
QEMAKRLQSALNSIKLSERGVFVQASTLGSLEALLEFLRSSKIPYAGVKIGPVVKRDVMK
ASVMLEHEEKYTVILAFDVKIERDAQEMADSMKVRIFQADIIYHLFDRFTEYQEELKRQK
REEFKHQAVFPCKIRVLPNFVFNSRDPIVCGVIIEAGVVRQGTPLCVPTKEFLDIGLVTS
IESNHKEVETARKGEEVCIKIEPIPGESPKMFGRHFDETDFLVSKISRQSIDVCKQYFRD
DLVKTDWQLMVELKKTFEIL
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaaaacccaagaagccggtctcagtatcttccgaggaggaactgagcggcatg
agttcgtcggaagaagagcaggtcgtgaccaagaaaaaggctccggctccccagaagaaa
tccaatcctaagatggacgacacggagtccgattccgaaggcgaagccaagaaagtcgag
gtcaagaagtcagcctttgccttactcatggacgatgacgacgacaacgacagtgagagt
gaggccagtgcgagtgatagcgacgatccccccgaacccattgaaaagaagaaaccagcc
cccgtcaagtcggctaaagcggaacccgccgctccggccaaaggtggcaaaaaaggcaaa
aagaagagggccaaaaacgacgacgacgaagaggacctggatcagttgctcgaagaactg
aagctcgaatatcaaggtcaaaagcccgctgatggtggtaaagaagaggccagtgatgct
caaccctcggccactcaagccaagagtaagaaggctgccaagaagtcagctcaggccaat
gcggaggacgacgacgatgatgaagatgatgacgacgacgaaggggacgaaggcggaacg
gtaaaaaccgcggcccaaaagcggaaagaaaagaaagagcggcaaaagcaaaagctggcg
gctcaaaaggctaatcaagccaagcaaaaggccaagacccaaaagcctcaaggcgaaacc
gaggttaagaaagtggaaaagatcgacgatgtcaagaaaccagttgtggaagttaagaag
tccaacgattcctcaaaggtagctgaagatctcccagacggtgatgccaaggccgccgag
cttccagaaaatgagcccgaagatgagggtggtaagaaaaagaaaaagaagggcgagaaa
gaggaccccaagaagaagggcaagaagcctggcaaaggtacactggcggccatgcaagag
gccttgaaaaaggtccaggaagaagaagaacgattgcggcgggaagaagaagaaaaaatc
cgcctcgaagaagaggctgaacgggaaagattggagaagaagaagctggaacaagagaag
aaagaggccaagaagttacgagaacgagagaaacgcgagcaacttcggaaagagggaaaa
cttttgacggccaagcaaaaagccgaaaaggccagagcggaagctatgctggaagccatg
agagagcatggcttcgaagtgcccaagattggggagaaaaaggccgctagacctggaacc
cgaatccgagttaagaaggaaaaaacaccagcccacgatgccagcaaagagaccacgcca
gattccgagaccaaacccgatatgcctgcaacagacccattggaaccggaaaagaaagaa
gatcccgttgaggaggtggccgattcgtgggaggagacggccgaagcgctcgataattgg
gaagaagctctcatcgaagacgacaaagaagaagaaggaccgaaaaaggccactaaagag
acttcacccgcttctacctctaaaaagggcgacggttctgaggatgatgccgaagacgac
gatgatgaaaacgataacgaggacgacgatgaggagagtgaggatgaagaagaggatcag
aacgaagccgaaaaacgacgagagcgagccatgattcggatcaagaagcgacaagaagac
aacgaggagaatcgcaccgtcgatgagctccgtgccccagtggtttgtgttctgggtcac
gtggacacgggcaagacgaaaatcttggacaagctcaggagaactcacgttcaagatggc
gaagcgggaggaatcacccaacagatcggtgccaccaacgttcccattgaagtcattaag
gagcaatgcaaaatggtcaaaaatttcaacagtaatttgaaactacccggcctattaatc
attgacacacctgggcacgagtctttctccaatctccgagatcgaggctcgtccctttgt
gatattgccatcttagttgtggatatcatgcacaatttggaaccgcagaccatcgaatcc
ataaatcttctcaagaagaaaaagacacctttcgtgatcgccttgaataaaatcgaccga
ctctacgaatggaaacccaaccgacacaaggatgtccaagaagtgatcgaaagccaacaa
cagaacaccaagctcgagtttcagaaaagatcccaagaagtcataatcgccattgcagag
caaggattgaacgctgccttgtattatgataaccctgacccgaaaacgtacatctccatg
gttcccacgtcggctcattctggtgatggaatgggcaatctcatgggtctgttggtccaa
ctgtcgcaaaccatgctggccaagcgcttggcattctccgaagagctacaggccaccgtt
cttgaggtgaaggccattcctggcttgggaaccacaattgacatcgttttggtcaatgga
agtctaaaagaaggtcagaccatgatcctagccggtacggatggtcccatcgtaaccccg
atcaaggctctgctcacccctgccaaaatgcaagacttgagggtcaagaacacttatatc
gaacacaaagagattcgagcggctcaaggtgtgaaaatctcggctaaagaattggagaaa
gccattgccggattgaatctgttggtggcctatcatcccgatgaagtcgacatatgtcgt
caggaaatggccaaacgactccaaagtgcattgaattcgatcaaattgagcgagagaggc
gtgtttgtccaagcttccactttgggctccctcgaggctctccttgagttcttgcgttct
tcgaaaattccgtacgccggggtgaaaataggacccgttgttaagcgagatgtcatgaag
gcgtccgtgatgcttgaacacgaagagaaatacaccgtgatcttggcctttgacgtgaaa
attgagcgagacgctcaagagatggccgattccatgaaagtcaggatctttcaggcagac
attatttaccatttgttcgatcgctttaccgaatatcaagaggagctcaaacggcaaaag
cgagaagagtttaagcatcaagccgtgttcccttgtaaaattcgagtccttcccaatttt
gtcttcaattctcgggacccaatcgtgtgtggcgtcatcatcgaagctggggtggttcgc
caaggaactcccctctgtgttccaacgaaagagtttctggacattggtttggtcaccagt
atcgagtccaatcataaagaggtcgaaaccgctcggaaaggcgaagaagtgtgcataaaa
atcgagcccattcccggcgagtctcccaaaatgttcggtcggcatttcgacgaaaccgat
ttcctcgtgagcaagataagccgacagtctattgatgtttgtaaacaatatttccgtgac
gacctcgtcaagactgattggcaactcatggtggaattgaagaagacatttgaaattttg
tga
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