Tigriopus californicus (tidepool copepod): 131878294
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Entry
131878294 CDS
T09700
Name
(RefSeq) PHD finger protein 1-like
KO
K11486
PHD finger protein 19
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
131878294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcf03000
]
131878294
03036 Chromosome and associated proteins [BR:
tcf03036
]
131878294
Transcription factors [BR:
tcf03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
131878294
Chromosome and associated proteins [BR:
tcf03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
131878294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mtf2_C
PHD
PHDvar_NSD
PHD_4
C1_1
PHD_NSD
PHD_ash2p_like
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
131878294
NCBI-ProteinID:
XP_059080211
LinkDB
All DBs
Position
3:complement(7102784..7107459)
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AA seq
671 aa
AA seq
DB search
MPASCSKPQMSRPAEFVKPALDPMVSGSTGHGLSWSRLLRNWRRRPWSEGQDVLLSGPDD
GLLYFGIVVETDEDTLQCLVRFGDGTERWSPFYHLRRLGEPEEVIDLTLADETEDCPDEE
DTLGPPKLVPQVLPATLSSSPLPAPPPDHDEANDLLPLKKPRLRPKNRPAPWPAHVLDAR
KALPYDFDRLKWDQNHARNDDQRYCYCGESGDWYRRMFQCAECRQWFHQECLRKSSPPVL
LGDGFFEFECALCTGKPEEILERLDVSWAEALHLVLFNLTLANSKRYHDLDTAIIPLFRR
KWKCLQGPGLCLKPGRIEHSFLHNVLRGHKARFKCGSEIKKRSTFWGLRKVLPPAVPNKL
GGDGPFVNFKLNLEGLPRGKASKRHWAPQRSKAPTTRYPTPGERGRVVCPSSTIQRKRGR
PARQTVETMDPDSDDTSSTTRGTLDSFIPPPKDFKGPNHPFRDLELESFNSARNKLGTNN
EEDGTSVPTSSTHSSPSSLEPLEMYKSKRSHPHRNGNIGLLETIDNCVATNSATSSLSFP
LAGLNGLGSNGNELARSLFAPQPALSNCLSVEGRSTASGPKFLTDLKLSLNSYFGAETRI
TKGERFNVNARRLTLDGDIQYLIEWEHPHPMSPTLESRHNSSSLANSDHQQSKFVSSNLR
ETLLQQQSAES
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcatcgtgtagcaagcctcaaatgagccggcccgctgagttcgtgaagcccgcc
ttggatccgatggtgtcgggctcgactggccatggtctgagttggtctcgtttgttgcgg
aattggcgtcgccgtccctggtccgaaggtcaagatgtgctcttgtccgggccagacgac
gggttgctatactttggcatcgtggttgagaccgatgaggacaccctccaatgtttggta
cgttttggagatggaacagaacgttggagtccgttttaccatttgcgacggctgggggaa
cccgaagaagtaatcgatctaactctagccgatgaaactgaggactgtccagacgaagag
gacacgctaggaccaccgaaactcgtgccacaagtcttaccagccaccttatcttcttct
ccactgcccgctccaccaccagatcacgatgaagcaaatgatctcttgcctttgaagaag
cctcgtttgcgtcccaaaaacaggccggctccttggcccgcccacgtgcttgacgcccgt
aaggccttaccctacgattttgaccgcctaaagtgggatcaaaatcacgctcggaacgac
gatcagcgttactgttattgcggcgagtccggagattggtatcgccgaatgtttcagtgc
gcggagtgtcgtcagtggtttcaccaagagtgtctacgtaaatcatcaccacccgttttg
ttgggcgatggtttttttgaattcgagtgcgccttatgtaccggtaaacccgaagaaatc
ctcgagcgccttgatgtgagctgggctgaagcactacacttggtcttgttcaatttgaca
ctggctaatagtaagcgatatcacgatttggacacggccatcattccactgtttcgacgt
aaatggaaatgcttgcaagggccaggattgtgcctcaaacccggtcgtattgaacattct
tttctacataatgtgctgaggggacacaaggcccgatttaaatgtggatcagaaattaag
aaacgctcgacattctggggtcttcgcaaagtgttaccaccggcagttcccaacaaattg
ggaggtgatggtcccttcgtcaactttaagctcaacctcgaagggttgcccaggggtaag
gcttctaaacgtcattgggccccgcaaaggtcaaaagcacccacgacacgataccccacc
ccaggagaaaggggcagggttgtttgtccctcatccaccattcagcgtaaacgtgggcgt
cccgcccgtcaaactgtcgaaacaatggaccccgatagcgatgacacgtcttccactacc
cgaggcaccttggattcattcatacccccgcccaaagactttaaagggcccaaccatcca
tttcgagacctcgaacttgaatcgttcaattcggctcgaaataagttagggactaataat
gaggaggatgggacttcagtgcccacctcttccacccattcttccccttcgagcttagag
cctttggaaatgtacaaatccaagcgatcccatccgcatcgtaatggtaacatcggtctt
ctggagacgattgataactgtgtggctactaactcggccacttcttcgctttctttccca
ttggccggcctaaatgggttgggaagcaatggcaacgaattagctcgaagtctgtttgcg
cctcagcccgccttgtcgaactgtttgtcagtggagggccgtagtactgcctccgggccc
aaattcctaaccgatctcaaattatccctcaatagctatttcggcgccgaaactcgcatt
accaaaggagagagattcaacgtgaatgctcgaagactgaccctggacggagatatccaa
tacctgatagaatgggaacatcctcatcccatgtctccgaccttagagtcccgccataac
tcgtcgtcattagccaatagtgaccaccagcagagtaaattcgtatcctccaacttgagg
gaaacacttctccaacaacagtcagcggagagttaa
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