Tigriopus californicus (tidepool copepod): 131878301
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Entry
131878301 CDS
T09700
Name
(RefSeq) glycine--tRNA ligase-like isoform X1
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
131878301
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tcf01007
]
131878301
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcf03016
]
131878301
03029 Mitochondrial biogenesis [BR:
tcf03029
]
131878301
Enzymes [BR:
tcf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
131878301
Amino acid related enzymes [BR:
tcf01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
131878301
Transfer RNA biogenesis [BR:
tcf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
131878301
Mitochondrial biogenesis [BR:
tcf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
131878301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
WHEP-TRS
tRNA-synt_2b
Motif
Other DBs
NCBI-GeneID:
131878301
NCBI-ProteinID:
XP_059080219
LinkDB
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Position
3:complement(13516911..13521319)
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AA seq
873 aa
AA seq
DB search
MSMNTWARARAGPGLRLHFLIRGGHRGRLAPSDTTAVTARALSAFYHPRPHQREIGLGLT
FVSVRTTSSGSRGWGHKKFQPHQRASKVVSLREWLAMDPEVEALLAPLRALVKEQGDVVR
ELKTQKAPEMDVKKAVAELKVRKKTLEDKELELTPAEAFFDRAKMEDLLKRRFFYDQSFA
IYGGVSGQYDFGPMGCALKGNLLNLWRSFFVMEEQMLEVDCTMLTPEPVLKASGHVDKFA
DLMVKDLKNGECFRLDHLIKAQLEKVKSEKKATAEVKARCDDIIVKLDNMGAPEMSAIMK
EFSMKSPVTNNDLSEPMEFNLMFQTHIGPTGLMKGFLRPETAQGIFVNFKRLLEFNQGKL
PFAAAQIGNAFRNEISPRSGLLRVREFTMAEIEHFCDPQDKSHPKFDDIRGTEICLYSAA
NQMEGKSVYKTTIGEAVDSDSNHFQTLSTLDDLYYFNKYLLHRPYIRDFAPSQWDNILSQ
HVSFTYPTIPSAMSNVTRWHTHLASFDPQERQSWPGNPTQSLDEIVTELFGSQSRPKSTV
ANHTIGYFMARIQQFLLKIGIDPKRLRFRQHMGNEMAHYACDCWDAEILTSYGWVECVGC
ADRSAFDLNQHYKATGVKLCAEKPLPEPVMENVVELITNKSALGKTFKKEAKLLTTHLAN
LDTAAVESIESSLNSTGQHSVEIDGQTFTLTKDMIVEVKRFQKKVFVEEIIPSVIEPSFG
VGRIMYSLLEHSFRVRPDDEQRTYFSLPAWMAPIKCSVLPLSNNPDFIPLVKLLSKALTE
AEVSHKVDDSSGSIGKRYARTDEVAVPFGICVDFDSLKTPHTVTVRERDSTLQVRMPVDD
VPEVLRRMSQGKLLWDDVMKKYPKFEQQQSSQK
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgaatacgtgggccagagcgagagcgggaccgggattgagattgcacttcctc
atacgtggaggacaccgtggccggctcgcaccatcggacacgacagccgtaaccgcacgc
gccctatccgccttttaccaccctcgccctcatcagcgggagattggcttaggattgaca
ttcgtgagcgtgcgcacgacgagtagtggcagccggggctggggtcataagaagttccag
ccgcatcaacgggctagtaaagtcgttagcttacgggagtggctagccatggatccggag
gtggaagcgctcttggcgcccttgcgggccttggtcaaggagcagggcgatgtggtgcga
gaactcaagacccagaaggcccccgaaatggacgtcaagaaggccgtggccgagctcaag
gttcgcaagaagaccttggaggacaaagaactcgaactcactccggccgaggcatttttt
gaccgggccaagatggaagatttactaaagcgtcgcttcttctacgaccaatcgtttgcc
atctacgggggcgtgtccggtcagtacgatttcggccccatgggttgcgccctcaagggc
aatctgctcaatttgtggcgctcgtttttcgtcatggaagagcaaatgctggaagtggac
tgtaccatgctcacccctgagcccgttttgaaggcctcgggacacgtggacaagtttgcc
gacttgatggtcaaagacctgaagaatggcgaatgtttccgtctcgatcacttgatcaag
gcccaattggagaaggtcaagtccgagaagaaggccacggccgaagtcaaagctcgatgt
gacgatatcatcgtcaagttggacaacatgggcgctcctgagatgtcggccatcatgaaa
gagttcagcatgaaatctcccgtcaccaacaatgatctgtccgagcccatggagttcaat
ctcatgttccaaacgcatatcgggcccacgggcctcatgaagggcttcctcaggcccgag
acggcccaaggcatctttgtgaacttcaagcgccttttggagttcaatcagggcaaactg
ccgtttgcggctgcgcaaattggcaacgcatttcgaaacgagatctcgccgagatccgga
ttgctccgtgtgcgagagttcaccatggctgaaatcgagcatttctgcgatccccaggac
aagtctcatccgaaatttgacgacatccgtggtaccgagatctgcctgtactcggcagcc
aatcaaatggagggcaagtccgtttataaaaccaccatcggcgaggctgttgactcggat
tcaaaccatttccaaactctctctactcttgacgacctttactacttcaacaaatacctc
cttcatcggccatatatccgagattttgctccttcccaatgggacaacatcctttcccaa
cacgttagcttcacttatccaacgattcccagtgccatgtctaatgtgacccgatggcac
acccatttggccagctttgatccacaagaacgtcaatcctggccgggcaatccaacccaa
agcttggacgagatagtcacggagcttttcgggtctcaatctcgacccaagagcactgtg
gccaaccacaccattggttatttcatggccaggatccagcaattcctgctgaagattggg
atcgaccccaagcgactgcgcttccgccaacacatgggcaacgagatggcccattacgct
tgtgattgttgggacgccgagatattgacctcctacggttgggtcgagtgcgtgggatgt
gctgatcgttcagcctttgatctcaaccaacattacaaggccacaggggtcaagctttgt
gcggagaagcccttgcctgagccggttatggagaacgtggtcgagttgatcaccaataag
tcggccttgggcaagaccttcaagaaagaggccaaactgcttacgacccatttggccaat
ttggacactgccgccgtcgagtccatcgagtcgagtttgaatagcacaggtcagcacagc
gtggaaatcgatggccagacctttacccttaccaaagacatgatcgtggaggtgaaacgc
tttcaaaagaaggtcttcgtcgaggagatcattcccagtgtgatcgagccctctttcgga
gtgggacgcatcatgtactcgctcctggagcacagcttccgagttcgtccggatgatgag
caacgtacttatttctccctgcccgcctggatggcgcccatcaagtgctccgttttgccc
ctgtccaacaacccggacttcatcccgttggtaaagttgttgtccaaggccttgaccgag
gctgaagtctcgcataaggtggatgacagctctggatccattggcaagagatatgcccgg
accgacgaagtggccgttccattcgggatctgtgtggactttgacagtctcaaaacgccc
cacacggtcaccgtgagagagcgtgatagtacccttcaagtgaggatgccggtggacgac
gtgcctgaggtcttgcgacgcatgtcccaagggaaattgctttgggatgacgtgatgaaa
aaataccccaagttcgagcaacagcaaagctcccagaagtaa
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