Tigriopus californicus (tidepool copepod): 131878362
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Entry
131878362 CDS
T09700
Name
(RefSeq) cytoplasmic FMR1-interacting protein-like
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcf03019
]
131878362
Messenger RNA biogenesis [BR:
tcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
131878362
Factors involved in mRNA localization
Other mRNA localization factors
131878362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Motif
Other DBs
NCBI-GeneID:
131878362
NCBI-ProteinID:
XP_059080293
LinkDB
All DBs
Position
3:8238670..8248800
Genome browser
AA seq
1263 aa
AA seq
DB search
MAEKVTLADALSNVDVLDELPLPDEQPCIEAAPCSIVYQADFDTNFEDRQAFITGVAKYI
EEATVHSSLNEMLEEGHEHAVMLYTWRCCSRAIPQPKSNEQPNRVEIYEKTVEVLSPEVK
KLMNLMHFQRKAIERFCGEVKRLSHEEKRKDFVSEAYLLTLGKFINMFAVLDELKNMKSS
VKNDYATYRRAAQFLKVMADSQSLQESQNLSMFLATQGKIRDTLKDNLEKIRNYEDLFCD
VIQICLTMFDTKAYLTPSEKHMLVKVMGFCLFLIDSEQVNVNKLDQKRRLRFDKMDKIFH
DLEVVPLFGDMQIAPFNYVKKMKHYEPGKWPLSSQVNSNSAQANLMIHVPKMREDHLKFS
SELARYSNEVTTTYKETPRSDSENRTLSELAFRGLQLLSEWTSQVTELYSWKLLHPTDHH
QNNECPQTAEEYERATRYNYSSEEKFALIEIIAMIKGLQVLMARMETVFTDAIRRNIYQE
LQDFVQLQLREPLRKSIKNKKDLIRSIIVSVRECCADWIRGIEPNDDPALKGKRDPDGGY
DLKVPRRNVGPSSTQLYMVRTMLESLIADKSGGKRTLRKDIDGNILMKIDEFHKNSFNWN
YLLNFSKSLQDCCDLSQLWYREFYLEMTMGQRIQFPIDMSMPWILTDHILETNDSSYMEC
VLYPLDLYNDSAHYALTVFRKQYLYDEVEAEVNLCFDQFVYKLSDQIYIYYKHLAGTILL
DKRFRQECQTMGTNIPSPPPNRYVTLLRQRHVQLLGRSIDLNRLICQRINSYLQKSLDLA
ISRFEAGDLTGVVELENLLKVNKLAHKLLSEHLALDDFDAMVAEANHNVLAPYGRITLHV
FWELNIDFLPNYCFNGATNRFIKCREILFSNQTQREKTKPPVMAHHYVWGSKALNVANNT
IYSQYAGFVGMPHFRSMAKLLGYQGIAVVMEELLKIIKALIQGDILNFTKTLMSAMPKQC
KLPRYDYGSPGVLSYYQAILQDIVQYPDARTELFHIFREFGNAVIFCLMTEQALSQEEVM
DLLHAAPFQNILPRPFCKEGEKQESKQKRQEAKYVALQIVQNIDKMGNAKQAQIAKDGDL
LTRERLCCGLSIFEVILTRIKSYLDDPIWTGNPPENGVINIDECTEFHRLWSALQYAYCI
PVGENEFNIEQMFGEGLNWAGCVMIVLLNQQRRFECLDFCYHIFRVQKVDGKDENIKGIQ
LKRMVDRIRRFQVLNSQIFASLNKYMKTSCGETENMPVEHVRCFQPPIHQSLASSQSQYR
APN
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atggccgagaaggtgaccttggcggacgccttgtccaatgtggacgtattggacgagttg
ccgttgccggatgagcagccgtgcatcgaggccgcaccctgctccatcgtgtatcaggcg
gatttcgacaccaactttgaggaccggcaggccttcatcacgggcgtggccaaatacatc
gaagaggccacggttcactcatccttgaatgaaatgttggaagaaggtcatgagcacgcg
gttatgttatacacttggcggtgttgctctcgtgccattccgcaacccaaatccaatgaa
cagcccaatcgggtcgagatctacgagaagaccgtggaggtgctctcgcccgaggtcaaa
aagctcatgaatttgatgcactttcaacgaaaagccatcgaacgtttctgcggcgaggtc
aaacgactttcgcacgaggagaaacgcaaagatttcgtctcggaggcctatctgctcact
ctgggaaagttcattaatatgtttgctgtcttggacgagctcaagaacatgaagtcgtca
gtgaaaaacgactatgccacttaccgacgtgctgctcaatttctcaaagtgatggcggac
agtcagtcattgcaggagtcgcagaacttgtccatgttcttggccacccaaggcaagatc
cgtgatacgctcaaggataacttggagaagatccgtaactacgaggatctcttttgtgac
gtcattcaaatttgtttgaccatgttcgacactaaggcgtatttaacgccgtcggaaaag
cacatgcttgtcaaggtgatgggcttttgcctttttctcatcgactctgagcaagttaac
gtgaacaaattggatcaaaaaagaagactgagattcgacaaaatggacaaaattttccat
gatctcgaggtggtgcccctttttggcgacatgcaaatcgcaccatttaattatgtcaaa
aaaatgaagcattacgagccgggcaagtggcctttgtcctctcaagtcaactccaactcg
gctcaggccaatctcatgatccacgtgcccaaaatgcgagaagatcacttgaagttttcc
tctgaattagcccgatactcgaatgaagtgaccaccacttacaaagaaacgcctagatct
gatagcgagaatcgaaccttgagtgagttagccttccggggactgcagttgctctctgag
tggaccagtcaagtgaccgagttgtattcgtggaagttactccatcccacagaccaccat
caaaacaacgaatgtccccaaactgccgaagaatacgagagagccacacgatacaactat
tcatccgaggagaaatttgccctaatcgagattattgccatgatcaaaggtcttcaggtg
ctgatggcccggatggagactgtcttcacagacgccattcgaaggaatatataccaggag
cttcaggatttcgttcagcttcaactgagagagccgctgagaaaatccattaagaataag
aaggatcttattcgaagcattattgtgtcagttcgtgagtgttgtgcggattggattcga
gggattgagccgaatgatgatccggccttgaagggaaaacgcgatccagatggtggctac
gatctcaaagtgccgcggcgaaatgttggtccaagctctactcaattgtatatggtgcga
acaatgttggagtcgttaattgctgacaagtccggaggaaagagaacgttgaggaaagat
attgatgggaacattctcatgaagattgacgagttccacaagaactcgttcaattggaat
tatttgctgaacttcagtaaaagcttacaagattgttgtgacttgtctcaactctggtat
cgagagttctacctcgaaatgaccatgggacaaagaattcagttccccatcgacatgtcc
atgccatggatcttaacagaccatatccttgaaactaatgactcatcatacatggagtgt
gtcttgtacccattggatctgtacaatgacagtgctcattatgccctcacggtgttcaga
aaacaatacctttacgatgaagtcgaagccgaagtcaacctttgtttcgatcagtttgtt
tacaaattgagcgaccagatttacatctattacaaacacttagctggtaccatcttgctg
gataagaggtttcgccaagaatgccaaaccatgggaacgaatatcccttcaccgcctccc
aatcgttacgtgactcttctgcgacaacgccacgtccaacttctgggtcgatctatcgat
ctcaatcggctcatttgtcagcgcatcaattcctaccttcagaagtcattggacttggct
atctccaggttcgaagcgggagatttaacaggtgtggtcgaacttgagaacttgctgaag
gtcaacaaactcgctcataaactgttgtctgagcatttggccctggatgattttgatgcc
atggtagccgaggctaatcacaatgtcttggcaccctatggaaggatcacgctgcatgtc
ttttgggaactgaacattgacttcttgccgaattattgcttcaacggagctactaatagg
tttattaaatgccgggaaatcctcttttccaatcagacccaacgtgaaaagacgaagcct
cctgtaatggctcatcattacgtatggggcagtaaggccttgaatgtggccaataataca
atttattcacaatacgctggctttgtgggtatgccccattttcgttcaatggccaaactc
ttgggttatcaagggattgctgtggtcatggaggagcttttgaaaatcatcaaggccttg
atccaaggagatatactcaacttcaccaagactcttatgagtgctatgcccaagcaatgc
aaacttccccgttacgattatggatcgcccggggttctgagctactatcaagccatcctt
caagacattgtgcaatatcccgatgcccgaactgaactatttcacatcttccgcgaattc
ggcaacgcagtcattttctgcctcatgaccgaacaagccttgtctcaagaagaagtcatg
gaccttttgcacgcggcacccttccaaaatattctgccaagacccttttgcaaagagggc
gaaaaacaagaatccaagcaaaaacgtcaagaagccaagtacgtcgccctgcagattgtt
caaaacattgacaagatgggcaatgccaagcaggctcaaatcgccaaggacggagattta
ctcactcgggaacgactttgttgcggtttgtccatttttgaggtgattctcacccggatc
aagtcctatttggatgatccgatttggacaggcaatcccccggaaaatggcgttatcaat
attgatgaatgcacggagttccaccgcttatggtcggctttgcaatacgcgtattgcatt
ccagtgggagagaatgagttcaacattgaacaaatgtttggagagggtttgaattgggcc
ggatgtgtgatgatcgttttgttgaatcaacaacgacgtttcgagtgtcttgacttttgt
tatcacatcttccgagtccaaaaagtcgatggcaaagatgagaacatcaaaggcattcaa
ttaaagcgaatggtggatcgaatccgtcgtttccaggtgttaaactcgcagatctttgcc
tcgttgaacaaatacatgaagaccagttgtggtgagaccgagaacatgcccgtagaacac
gttcgatgcttccagccacctattcatcagtcattggcctccagtcaaagtcaatatagg
gcacccaattaa
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