Tigriopus californicus (tidepool copepod): 131878370
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Entry
131878370 CDS
T09700
Name
(RefSeq) NACHT and WD repeat domain-containing protein 2-like
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tcf04990
]
131878370
Domain-containing proteins not elsewhere classified [BR:
tcf04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
131878370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_NWD2_C
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WHD_NWD1
WD40_Prp19
AAA_16
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
DUF4062
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
WD40
WDR55
NACHT
AAA_25
WD40_CDC20-Fz
APAF1_C
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ATPase_2
AAA_22
Beta-prop_WDR41
Motif
Other DBs
NCBI-GeneID:
131878370
NCBI-ProteinID:
XP_059080305
LinkDB
All DBs
Position
1:complement(899082..904781)
Genome browser
AA seq
1665 aa
AA seq
DB search
MDEKTVDRIFAGCLEDLPPVSSKIVRIFTSSTFTDMLMERNTLMEYVYPKIKEYCREKHG
LEFQVVDMRWGVRDEMTNEHMTTELCMTELTNCQRLSMGPNFIYFGGQKYGYRPIPTYII
SSELAMLREVLVTMGNDVSLLDKWYRTDYNSVPPESILQPIDTYLVHFLNKRVPKLQARD
SGIWWGTLYKMQLMLRKASHTLYVNGKMTHEQCHNYHMAVTEREVINGCLSVSSVKDHII
IYTRIINNINLQNLKRASAFIDINDRKVDQEAVKLLAHYRDELLPQKMKENNGIYKRYNV
EWIGREGLATETHEEYLNDFINNFYKNVIKLVDRAMRKEDTSAQGKIITEILQHLHACKN
SVKVFYGRVEELEHLKTYITGVSKQPFVLHGAGGSGKTAMLSMTACKSVNEWLSPAKPLL
IVRYLGTTPDSSSLAPLLTSICQQLSYTFMLPFEDIPDDLVPLTAHMKELLNQATEEQPL
LICLDSVDQLIGSQDGNKMSWLPTKLPKHCKIIVSVTREENNPLLCQDYELLTKMIEEKQ
NFLEVRALGEDLAWKVIKLWMEAAGRDLNNYQWRVVANAVAKCSLPIFCKLVFAEICRWK
SYSKPQDTYLAHSVMDSIFLLFEKVETKHGWFLVSHALAYVTAAKSGVSETELEDLISLD
DKVLDDIYQYHLPPVRRIPPLLWTRVRSDLPGYLSDSEADGVSVINWYHRQFKDAAKIRY
FTTDVETIYFHSMMSDFFLGKWGGGTPKPFKFTEIQKHRFGLKSKDSEADRQIPAMPLVF
YTKDGKISRYNLRKFGELPYHLVRCRQFEDLYSNVLFNYQWLYAKMSACPLQAVLSDFED
ACSHVDDKDAKREIMLVADSLRLGGAILGQYPDMLAPQLVGRLLSEMKSNKNISNLLRQC
DEEGLLQNALVPTYHCMHTPGGPLKYSLEGHQFAVFGFKLTSDFRYIVSVSNKFITWDVS
TSDLARQVHPGVEGLMMDLEISPDNRFVAAYTNNNQTILLNNLISEFIIIDNPLSKEKND
AVQGLCLLDTNVIVYGQFGWVIFDMTGKELQNKQIFRDSPILKMIMVSLENFSILYWSGE
EGNLEMIVETYKAGKLGAPMTFYSGIALNQEQSKIWLCDDEDCLVLSEFTWKNNGWSKGR
EFPGNKHPLLMIELSMDEIFVIGTFMTGFHLWRTKDENEFTILKLPSGIRNISTKMNKSN
SCVLSSGHVYAVAGIRKELYIWSMHNGQLVKCLDAHFARIIDIQPLTIGSWNSVITSSID
RTVKVWNMNYIFEQVHHIDRHELQIDSVSLCTRLGIAVTVTRNCIGIWDLLTGKLRSKLA
DSALGAIVTQALVTANGDFIIAAESGFVLFWNVEKKVVTFKEEQKDILQVMFYEDELKCM
VVSKVGVVPDLKARAVSRTFPEGEKNFEFDFPYKQYKSIILTSDAQFFIAYGFEKTKEML
FVYHAETGDFLHKILVKYPNFKEVAMIVALPDKPGHVALVDLDKGNIMDVKNKKYVRSIP
QWGGRCSKDGRYGLYAPSRGGLDMLDLRHGTVVKTLIPKIAEGIFNVICKFNETNEYILY
YHSGRKTLRIFRVADGVMIANYRVPSDLSSLESTTDGNSVVLGMVDGNLTVLTIADPKKA
HIKDYLKQLPSRNQDKEETKDIGRKTPQQGRTPAVKRKEVGTSEE
NT seq
4998 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaaaacggtggacagaatatttgctggttgtctagaggacttacctccggtg
agttccaagattgtgcgcatcttcacgagttctacgtttacagacatgttgatggaacgt
aacactctcatggaatacgtgtaccccaaaatcaaggagtattgcagagaaaaacatggg
ttggaattccaggtggtggacatgagatggggcgtgagagatgagatgacaaatgaacac
atgaccaccgagctctgcatgactgaacttaccaattgtcagcgattgtccatgggaccg
aattttatttactttggaggacaaaaatacggatatcgacccatacccacttacatcata
agcagcgagctcgccatgttaagagaggtcctcgtgaccatgggaaatgatgtcagcctt
ttggacaaatggtatcgcacagactacaattctgttcccccagagtcaattcttcaaccc
attgatacatatttggtacatttcttgaacaaacgggttccaaaattgcaagccagagat
tcggggatctggtggggaaccctgtacaagatgcagctcatgctccggaaagcttctcac
acactctatgtgaacggcaagatgactcatgagcaatgccataattaccacatggccgtc
actgagagagaggttatcaatggatgcctcagcgtgtccagcgtcaaggatcatatcatt
atctacacaagaatcataaacaatatcaatcttcagaatctaaagcgggcgtctgctttc
atcgacatcaatgacaggaaagttgatcaagaggcagtaaaacttttagctcactatagg
gatgaactcttgccccagaaaatgaaggagaataatggaatctataaacggtacaacgtg
gaatggattgggcgagaaggattagccaccgagacccacgaagaatacctgaacgacttc
atcaacaacttttacaagaatgtaatcaagctagtagaccgagccatgcgcaaggaggac
acttcagcccaggggaaaatcatcactgagatcctccaacatcttcatgcctgcaagaac
tctgtaaaggtcttctatggccgagtggaagaattggaacatctcaagacctacattacc
ggcgtgtcgaaacaaccctttgtacttcacggagctggcggttcaggcaaaactgccatg
ttgtccatgaccgcgtgtaagagtgtcaacgaatggttgagcccggccaaaccactcttg
attgtcagatatttggggaccacgccagattcaagctccctggccccgttattaacatcc
atatgtcagcagttgtcttatacattcatgcttccctttgaggatattcccgatgaccta
gttccattaacagcacacatgaaagagctccttaatcaggctaccgaggagcaacctttg
ttgatttgtttggattccgtcgatcaactcattgggtcgcaagatggaaacaagatgtct
tggctcccaacaaagctacccaaacattgcaagattattgtctctgtcactcgagaagaa
aacaacccacttctttgtcaagactatgagcttctaactaaaatgatagaggagaagcag
aactttttggaagtcagggcattgggcgaggatctagcttggaaggtgatcaagttgtgg
atggaggctgcaggcagggatttgaacaactaccaatggcgagtagtggcgaacgctgtg
gctaaatgctccttgccaatcttttgcaagctcgtttttgctgagatatgtcggtggaag
agttactctaagcctcaggacacgtatctggcacacagcgttatggacagtattttctta
ctctttgagaaagtcgaaacaaagcatggatggtttctagtatcacatgcattggcttat
gtcacagccgccaaaagtggcgtgtccgaaacagagttggaagatctgatctctttggac
gacaaagttttggacgacatctatcaataccatttaccgcctgtgcggagaattccgccc
ctgctttggacccgggtccggagcgacttgccaggttatctttcagacagcgaggctgac
ggcgtgagtgtcatcaattggtaccacaggcaattcaaagatgctgctaaaatccgatac
tttaccactgacgtggagactatctacttccattccatgatgtcagacttctttcttggc
aaatggggtggtggtactcccaaaccgttcaagtttacggagattcagaagcataggttt
ggcctcaagagtaaggacagcgaggcagatcgacaaatccctgccatgcctctggtgttt
tacaccaaggacgggaagatctcgagatacaacttgagaaaatttggagagctcccttac
catttggtgagatgccgacaattcgaggacttgtactccaatgtcttgttcaactaccaa
tggctgtacgccaagatgtcagcctgtccactgcaagccgttcttagtgattttgaggat
gcctgcagtcacgttgacgacaaggatgctaaacgagaaataatgcttgtggccgactcg
ttacgtttaggtggcgccattctaggccaatatccggatatgttagcgccgcaactcgtc
gggcgactactctccgaaatgaaatcaaacaaaaatatcagcaacctcttacggcagtgt
gacgaagagggattgctccaaaatgccttggtcccaacataccattgcatgcatactcca
ggcggacctttgaagtattctctcgaaggccaccaatttgcagtatttgggttcaaattg
acgtctgactttcgttacattgtcagtgtttccaataaattcatcacttgggatgtttca
acaagtgacttggccagacaagtccatccgggagttgaagggctgatgatggatcttgag
atcagccctgataatcggtttgttgccgcttacaccaacaataaccagacgattttgctg
aacaacctcatttccgagttcatcatcatcgataacccgttgtccaaggagaaaaatgat
gctgtccaaggcctttgtcttttggataccaatgtcattgtgtacgggcaatttggttgg
gtgatttttgatatgacgggaaaggagctgcaaaataagcaaatctttcgcgactctccc
attctgaagatgataatggtttccttggagaatttctcgatcctgtattggtccggcgaa
gagggaaatctggagatgattgtcgaaacctataaagccgggaaattgggagctccaatg
actttttactccggcattgccttgaaccaagagcaaagcaaaatatggctttgcgatgac
gaggactgtctcgtgctctccgaattcacttggaagaacaatggctggagcaagggtaga
gagttcccggggaacaagcatcctttgctcatgattgagctctccatggacgagattttt
gtcatagggactttcatgaccggatttcatctgtggcgaaccaaagacgagaacgagttc
acaattctgaaactgccatctgggatccggaatatctccaccaaaatgaacaagtcaaac
tcttgtgtgctatcgtctggtcatgtctacgctgtggctgggataagaaaggaattgtac
atttggagtatgcacaatggtcagctggtcaagtgcttggatgctcattttgctcggatc
atcgatattcaacctttaaccattggctcttggaactctgtcatcacatcgtccattgat
cgcaccgtcaaggtgtggaacatgaactatatcttcgaacaggttcaccacattgacagg
cacgagctccaaatcgactcggtaagcctttgcacacggttaggcattgcagttactgtc
actcgaaactgcatcgggatttgggaccttctcacaggtaaactacgatccaaattagcg
gactctgctcttggtgccattgtcacacaggccttggtaacggcaaatggcgacttcatc
attgccgccgaatcaggatttgtcttattctggaatgtcgagaagaaagtggtaaccttt
aaggaggagcaaaaagatatccttcaagtcatgttctacgaggatgagcttaagtgcatg
gttgtatcaaaagttggagtcgttccagatttgaaggccagggctgtatctaggaccttc
cctgagggcgaaaagaactttgagtttgatttcccctataagcagtacaagagcattatc
ctcacatcagacgcccagtttttcatcgcctacggttttgagaagaccaaagagatgctt
tttgtataccacgccgaaactggcgatttcctgcacaagatcttggtcaagtatcccaat
tttaaagaagtcgccatgattgtggcgctaccagataaacctggtcacgtggctttggtc
gatttggataaaggcaacatcatggacgtgaagaacaaaaaatacgtccgatccatccct
caatggggagggcgatgctccaaagatggtcgttacggcctttacgcgccctctcggggt
ggactggacatgcttgatttacgccatggaacggttgttaagaccctcatccccaagatc
gccgagggcatattcaacgttatttgcaagtttaacgagaccaatgagtacatcctctac
tatcacagtggaagaaagacattgcggatctttcgcgtggctgatggcgtgatgatcgcc
aattatcgggtgccatctgacctgagttccctggagagcaccacagatggtaacagtgtg
gttctggggatggtggatggtaatctgactgtgctcaccattgccgatcctaagaaagcc
cacataaaagattatttaaaacaactcccttcacggaatcaagacaaagaagagaccaag
gatattggaagaaagacacctcaacaaggcagaaccccagccgtcaaacgaaaagaagtc
ggaacaagtgaggagtaa
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