Tigriopus californicus (tidepool copepod): 131878391
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Entry
131878391 CDS
T09700
Name
(RefSeq) erlin-like
KO
K23341
erlin
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcf04121
]
131878391
Ubiquitin system [BR:
tcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
ERAD complex
131878391
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GFIT
Motif
Pfam:
Band_7
Motif
Other DBs
NCBI-GeneID:
131878391
NCBI-ProteinID:
XP_059080327
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Position
3:5385284..5391647
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AA seq
562 aa
AA seq
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MNDLSQEDKPNESRKPPQTVASQINPCCDLVTGGSRFKKDSPSSVVIRLTGECELLAFKR
SRYKPLVEGVCSTRNFVPRGQPLTIQENICQEKPPSGQKHLPLTSSGLPNLDNESVIRST
DEGIASASSTISLGLNTHSLEDSIPLKSTPRVNYSTSFEIGKTLAKSAKGHRSASGIQSH
PVYLVVSERGNPFERLHQAKGIRNVISQVQDVNDILKRLSNMGDEEDSSFSLGLDQFCTT
RKKLWTICSVVAAILAFIVSIVAGSIHKVHEGNVGIYFKHGALLDHFSLPGIHLKAPFVT
DVKEVSVRPETDTLPDFNTVTKDGIQNTFFEVQVISDVSMQQIVALIRKFGMNYKQALVF
DRIKEELRIFCANHTVDEVYNEKFLDIVQAVKTRTEEKIKRLGMDGIKILNLVIPKPDIP
PDIVSNYKAVKVQWTEQLVATQLQRTEQIRKETESMKAVADANRQKAVLEIELQKHVLMK
EGEKDVSLLDNEIVRKREESNADVEAYKKIKDAEGNAVLFTKEYVQLEMAKALSNNTKYY
FSGEQSVLGALLNRVLGKDTET
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacttgtcgcaagaagacaaacccaatgagtcaaggaaaccacctcaaactgtt
gcttctcaaatcaatccttgttgtgatcttgtcacaggcggctctcgtttcaaaaaggac
agtccatcaagtgtggtcatccggttgacgggagaatgcgagcttctggccttcaagaga
tctcgatataagccattggtggagggtgtttgctcaactcgaaactttgtgccacggggt
cagcctttaacgatccaagaaaatatctgtcaagaaaaaccaccatcaggtcaaaagcac
ttacccttgacgtcctctggtctcccgaacttggacaacgaaagtgtcattcgctccact
gacgagggtattgcatcggcttcatctactatttcattgggtctgaatactcactccttg
gaggattcaattccattaaaatcgacacctcgggtgaactattctacctcgttcgagatc
ggaaaaactttggcgaaatcagccaaaggacatcgtagtgctagtggtattcaatcccat
ccggtgtatttggttgtttcggagcgaggaaacccgtttgaaagattgcaccaggccaag
gggatcagaaacgtcatcagccaagtccaagacgtgaatgacattttgaagagactctca
aacatgggcgatgaagaggattcatcattttccttgggactagaccaattttgcaccaca
cgaaagaagctgtggacgatttgcagtgttgtggccgccatccttgcgttcatagtctcg
attgtggcgggttccattcacaaagtccatgaaggaaatgtggggatctactttaaacac
ggggctctcttggaccatttctctctccctggcattcatttgaaggcgccttttgtcacg
gatgttaaggaagtgagcgtgagacctgagacagacactttgccggatttcaacacggtc
acgaaagacggcattcaaaacacattctttgaagttcaggtcatttcagacgtgagcatg
caacaaatcgtggccctcatcagaaaatttggaatgaattacaagcaagctcttgtgttc
gatcgaatcaaagaggagctccggatattttgtgccaatcacaccgtggacgaggtgtac
aatgaaaagtttctggacattgtgcaggccgtcaagaccagaacggaagaaaaaatcaaa
aggctgggcatggacgggatcaagatcctgaacttggtcattcccaaacccgatatcccg
cccgatatcgtgagcaactacaaagccgtcaaggttcaatggactgagcaattggtcgcc
acgcagctacaaaggaccgagcagatccgaaaagaaaccgagtcaatgaaggccgtggcc
gatgccaaccgacaaaaggccgtcttggagatcgagctccagaagcatgtcctcatgaag
gaaggtgagaaggatgtcagtctcttggacaatgagatcgtcaggaagagggaggaaagc
aatgctgacgtggaggcatacaagaaaatcaaggatgcagaaggcaatgccgttctgttc
accaaagagtacgtccaattggaaatggccaaggccttgtctaataacaccaaatactac
ttctcgggcgagcagagtgtgttgggtgcactcctcaatcgggtcctaggcaaggacacc
gaaacgtga
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