Tigriopus californicus (tidepool copepod): 131878504
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Entry
131878504 CDS
T09700
Name
(RefSeq) uncharacterized protein LOC131878504 isoform X1
Organism
tcf
Tigriopus californicus (tidepool copepod)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWWP
SET
PHD-1st_NSD
AWS
PHD_NSD
PHDvar_NSD
DUF4729
PHD
Sina_ZnF
C5HCH
zf-HC5HC2H
zf-HC5HC2H_2
PHD_2
Prok-RING_1
zf-Di19
Motif
Other DBs
NCBI-GeneID:
131878504
NCBI-ProteinID:
XP_059080475
LinkDB
All DBs
Position
3:complement(3468016..3477434)
Genome browser
AA seq
2266 aa
AA seq
DB search
MEEDLTCRVEVLPSFNLQSRHRASRIRLSPLAPLSSTTSSTRSGAKTCLSPNPIHGGRGG
PRGRSRKVLVPGVNRRGRAARGGARRARGLIRGQRVTRQAGHLSPFSIYPRVRLAKADRD
QAERAILSVLTPNQVEKRSQNKAALSEDLERLKRGSKRRNAASVIFRPQVEAVHSFISDI
DSVSESDSADQDGSAEVIHYQARSFQAPISDSPESLIQWVEPKSVKVNLDTTTEWSFIFS
QNRQASFIEAFEHSPVEDPLLDSTASTISVVVDPEDNISFNNIQPRLFQDINMERSNGLA
KTLDPPNSCEKSKLDIVADPPSSPSCSVIEEKGESDDQSSLSQSTSIDAAAADEQPEKAG
ADPTTDSERVVLRENRVMIMEDQEDEEKKEKIISCSSSSSSSSAFSASPASPLNGQHEDI
AQERRAQEEEREEHEEDQQHQQRKERSTESEVLESESHQNSCESQTETDASLIQDEGLSI
ATCLLDEIIEHVPSLTSSAFNWSTTRNDVVMEDDGGEMDDEDSILLPTNAFIKEELESET
EEPSSCKVTKSGRRVIRPFTPDLNHSNRASPMQCPKREIRSATPEDLAEKMRQFEMTSPA
AFEEGCMLWARVGSTCFWPCAALSDPDIGIYTRISTKRNQLQREYHVQFYGRPVQRAWVL
NSYIMEYEGIEEFHQKTEMIRKKVRGTKHGPKVLRAYIPNGKTAKLGWEEAVEGAEKSLS
LSSQERVIQLKALSQELLLKGPRQRFQSGSSTLSGASRKRKRTISGTTVDSSVSEEESLA
KKPRFAQADRLIQAIPAETLEAHRRKLKTGFKLFHLANFDRIRAECEDNAETDKKLGKLW
ADAACLERRFYQEQASNLVHSEQVDDSRSSIQGEDDYVILDSEDEAFNDASSVSSSIRSA
KNVVCRQPPTLELIGQWKKENCCMICEEVENQQNDLVRCRGVCGNSFHLSCIQVQTSSKE
DWKCSECTSGVHACHICKSPAKQVSRCTSPGCGRFYHLECLRDSGMWPQTRVGDNKFVCP
VHMCHTCASTNPKEPFMKYSSRLLKCIRCPTAYHSGDFCVTAGTVQITSTQIVCPKHYTP
PANRKSGGSLHVNTNWCFLCSKGGSLICCEKCPASFHTECLQIKPPEGVFVCDSCEVGRM
PLYNEVVWVKLGNYRWWPATVLHPAKVPANIEKLPHETGEFPIQFCGSKEYFWINQGRCF
LYEDGDAEKIPSDSAKGLNAAYKRGLREAAEAFNVYTKEKEAREAANVDKARLSKSLKPP
MYTKIKANRPYGDCPVYTEDASDKTCDCDFEQESPCGPDSECINRYLMVECRPSSCPSKE
KCQNQRFTKRLYPKLTVGLTQGRGWALVVGEDVKKGDFIIEYVGELITQDEFQRRLQSSL
QRKAESNFYYMTMDNHRMIDAGPKGNMSRFMNHSCDPNCETQKWTVNGDTRVGLFAKENI
KSGSELTFNYQFEAVGEVKTKCLCGAKNCSGFIGEKPKDGKSVLTIDGRKKKKAKIKKPK
KVWEDLCFRCMDDGQLLMCDYKTCPKVYHLECLGREKMPREKWFCPWHHCVHCGKPAVNY
CMHCPNAYCKTHDMAVNAHEELGNICDEHEDDLDDLLAFYRSVGGVTKLVPHPNVTPEET
AADQVVTNGGKTPLTEIHSSNCSSASDENSSALIFPLIEPDEDTEKAERKSQTKRYLCKC
IEDGCEWEGKKSRFLDHLMKRHELPLDVSQAKVRQVLNGIVLQDYPDENGDSSLLSASYS
DSILAARLRKGKERLKICPDPACRLKMRASNIARHIKTRHPHLDESLANSAQYADMDDFQ
SDLDLTLNMSNQSRVSNGFDQSGPVAKTPGKERLKVCPVSGCNLNIRASNLVRHIKTKHP
EVDESISLKATYADQRPRTSFTPQQFVTPNTSALNLSEVSNDSTDKFGKERMFTCKYCGV
QMRASNLGRHIKARHEREDGSNPIYISPPETESGRRMQVRCPACNLILRPSNFNRHWARR
HPAQPLPDVRERRQMYIEADEAEIDDTDDGLQNGESGMGAISVEPVFYGEANVGGVPFEM
DDEEGSLEDITFDDDYDARNGPVKYSTPQMNAQSSQLNLSGSSSKHIPASMRELKYRCDT
CGYVSRFRQNLDRHCKKRTHYSEYLLRTSKNPHVYVQTPDQAIQDVPPSPAKLPPPPLSQ
RLDLVEDEDQMMMLTPQVCLEGGASEEEDDEELEEIEDDIQADPVVDNNDLEQEESQPTP
EEEQPSRPQPSPNKNDFCNFDLNGILGDSSSEDDDDGIINVDYKIL
NT seq
6801 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagacttgacttgtcgtgtcgaagtgctgccttctttcaatctccaaagtcga
catcgggcttctcgaattaggttgtcgcctctggcacctttatcgtccaccacctcctcg
acccgctccggtgccaagacatgcctgtcacccaatcccatccacggaggacgaggtgga
cctcgaggacgatcgcggaaggtgctcgtccccggggtcaataggcgaggtcgtgccgca
cgaggtggagcacgtcgagcccgaggcttgatccgaggtcaacgggtgacccgacaagcg
ggccacctatcccctttctccatctacccccgggtacgattggccaaggcggatcgagat
caggccgagcgagccattttgtctgttctcacacccaatcaagtggagaaacgctcgcag
aacaaggcggcgctcagcgaggacttggaacgcctcaaacgtggatccaagcgtcgaaac
gcggctagtgtcatctttcgaccgcaagtggaagccgtgcacagcttcattagtgatatt
gacagtgtcagtgagtcagacagtgcagaccaggacggctcagccgaagtgattcattac
caggctcgatcatttcaagcccccatatcggattcccccgagtcattgatccagtgggtg
gagcccaagtccgtgaaagtgaacttagacaccaccaccgagtggagctttattttcagt
caaaaccgtcaagcctccttcatcgaggccttcgagcacagtccagttgaggatccgtta
ttggattcgaccgcctccaccatatccgtcgtggttgaccctgaggataacatctcattt
aacaacatccaaccgcgcctctttcaagacattaacatggaacgatccaacggtctcgcc
aagaccctagacccccccaactcttgtgagaaatccaagctcgatatcgtagccgaccct
ccgtccagcccgagttgttccgtgatagaggagaaaggcgaatctgatgatcagtcgtct
ctcagtcagagtacctcgattgacgcggcagcagctgacgagcaacccgaaaaagctggg
gccgatccaacgacagattcggaacgggtcgtcctgcgcgaaaacagggtgatgatcatg
gaggaccaggaagacgaggaaaagaaggagaagatcatatcctgttcctcctcctcctcc
tcctcctccgccttctccgcctcccctgcctcccctctgaacggtcaacatgaagatata
gcgcaggaaaggagggcccaggaagaagaaagagaagagcatgaagaagaccaacaacat
caacaacgaaaggaaagaagcacagaatcggaagtcctcgagagcgaatcccatcaaaat
tcgtgtgagagtcaaacagagactgatgcgagtctgatccaagatgaaggactatcaata
gccacatgtttactcgatgaaataatagaacatgtgcccagcctcacctcctcggccttc
aattggtcaacaacccgaaatgatgtcgtaatggaagacgatggaggtgagatggacgat
gaagattccatacttcttccaacgaatgcattcatcaaagaggaattggaatcagaaacc
gaagagccctcctcctgcaaagtcaccaagagtggtcgtcgtgtgatcagaccattcaca
ccagacctgaatcattcgaatcgcgcgagtccgatgcaatgcccgaaacgcgagattcgg
tcggccacacccgaggacttggccgagaaaatgcgccaattcgaaatgacctctccggcc
gcgtttgaagaaggttgcatgctatgggcgagagtgggaagtacatgcttttggccttgt
gcagccttgagcgatcccgacattggaatctatacacgtattagcacgaagaggaaccaa
ttgcagagggagtatcacgttcagttctacgggagacctgttcaacgagcttgggttctc
aattcgtacatcatggaatatgaggggatcgaagagttccaccaaaagactgaaatgatc
aggaagaaagtccgcggaaccaagcacggacccaaagtgcttcgagcctatattcccaat
ggaaagactgccaaattgggctgggaggaagctgttgaaggtgccgaaaagtcgctgagt
ttatcctcgcaagagcgagtaatccaactgaaggccctctctcaagagctccttcttaag
ggtccacgccaacgctttcaaagtggaagttccaccctctccggcgcttccaggaagcga
aaacgcaccatcagtggaaccacggttgatagcagcgtgagcgaagaggagtcgttggcc
aagaagccccgatttgcccaagctgatcggcttattcaagccattcccgccgaaaccctc
gaggcacatcggcgaaagctcaagacgggattcaagctatttcatttggccaattttgat
cggatccgggcagagtgcgaggataatgccgagaccgacaagaagctgggcaagctctgg
gctgatgcggcgtgcttagagcgtcgtttctaccaagagcaagcctccaacctcgtgcat
agtgaacaagtggatgacagtcgatcctcgatccagggtgaagacgactatgtgattttg
gactctgaggacgaggctttcaacgatgcctcgtccgtgagcagtagcatcaggtcagcc
aagaatgtcgtgtgtcgacaacccccaaccctagagttgattggccaatggaagaaagag
aattgctgcatgatctgcgaagaggtcgagaaccaacagaacgatctggtgcgatgtcgc
ggggtatgtgggaattcttttcacttgagctgcattcaagtgcaaacctcgagcaaagag
gactggaaatgctcggagtgcacgtcgggggttcatgcttgtcatatctgcaagtctccc
gctaaacaggtcagtcgctgcacttcgcctggctgcggccgattctaccatttggagtgc
cttcgtgattccgggatgtggcctcagacgcgcgttggcgacaacaagttcgtctgcccg
gttcatatgtgccatacatgtgcctcgaccaatcccaaagagccattcatgaagtactcc
tctcgactgttgaagtgcattcgttgtccgacggcctatcattctggagatttctgcgtg
actgcgggcacggttcaaatcacgagcacgcagatcgtgtgcccgaagcattacacgccg
ccggccaaccgtaaatccggaggatcacttcacgtgaacaccaattggtgctttttatgt
tcaaagggaggctctctcatttgctgcgagaaatgtccggcgagcttccacacggaatgc
ttgcaaatcaaaccgccagagggcgtgtttgtctgtgatagttgcgaagtgggacgtatg
cctttgtacaacgaggtcgtgtgggtgaaactaggaaattatcgttggtggccagccact
gtattgcatcccgccaaggtcccggccaatattgagaagcttccccacgaaacgggcgaa
ttccccatccagttctgcggctcgaaggaatatttttggatcaatcaagggcgctgtttc
ctctatgaggatggggacgcagaaaagatcccgtccgatagtgccaagggtctgaatgcg
gcctacaaaagaggcttacgcgaagctgccgaagcgttcaatgtctacactaaagagaaa
gaggctcgcgaagctgccaatgtggacaaagcccgcctttccaagagtctcaaaccaccc
atgtacaccaaaatcaaggccaatcgcccttacggcgattgtcccgtatacaccgaagac
gcctccgacaagacctgtgattgtgattttgaacaagaatctccgtgtggccccgatagt
gagtgcatcaaccgatacctcatggtggaatgccgtccctcctcgtgtccatccaaagag
aaatgtcaaaaccagagattcaccaaacgtctctacccaaagttaaccgtgggcctcact
caaggccgtggttgggccttggtggtgggagaggacgttaaaaagggtgacttcatcatt
gaatacgtaggtgagctcatcacgcaagacgaatttcaacgccgcctacagagcagtctt
caacgaaaagcggagagtaacttctactacatgaccatggacaaccatcggatgattgac
gcaggccccaagggcaatatgtccaggtttatgaaccattcgtgtgacccgaattgcgaa
acacaaaaatggacggtcaatggtgacacgagggtgggcttattcgcgaaggagaacatc
aaatcgggctctgagctcactttcaactaccaattcgaggccgtgggtgaagtcaaaacc
aaatgcttgtgcggtgctaagaattgctccggcttcataggcgagaaaccgaaggacggt
aagagtgtcctcaccatagacggaaggaagaagaagaaagccaagatcaagaagcccaag
aaagtctgggaggatctctgtttccgttgcatggatgatggtcagctcctgatgtgcgac
tacaagacctgtcccaaggtctaccatctggaatgtctaggccgagagaagatgccgaga
gaaaagtggttctgcccttggcatcattgcgttcattgtggaaaaccggccgtgaattac
tgtatgcattgtcccaatgcttattgtaaaacccacgacatggcagtgaacgcccatgaa
gagcttgggaatatctgcgatgagcacgaggacgacctggacgatctcttggcgttctat
cgaagtgttggaggggtgaccaaactcgttccacatccgaatgtgacacctgaggaaaca
gctgcagaccaagtggtgaccaacggtggaaaaacacctctgacggagatccactcctcg
aattgctcatcagcctccgatgagaattcgtcggctttgatcttccctttgattgaacct
gatgaagataccgaaaaggccgagcggaaatcgcaaaccaagcgatatctttgcaagtgc
atcgaggacgggtgcgaatgggagggcaagaaaagccgatttcttgatcatcttatgaaa
cgtcatgagctcccattggacgtcagtcaagccaaagttcgtcaagttctcaatggaata
gtcctgcaagattatccggacgaaaacggagattcgtcgttattatcggccagttattcg
gattccattctggccgcgcgattacggaaaggcaaagagcgcttgaagatttgtccggat
ccagcttgtcgactgaagatgcgggcctccaacatcgcacgtcacattaagacccgtcat
ccccatcttgatgaatcgctcgctaattcggcgcaatacgccgacatggacgacttccaa
tccgatctcgacttgaccttgaatatgtcgaatcaatctagagtgtccaatggtttcgat
cagagtgggccagtcgccaagaccccgggcaaagagcgtttgaaagtctgtcctgtgtcc
ggttgcaacttgaacatccgggcttcgaatctggtccgacacatcaagaccaaacacccc
gaagtggacgagagcatctcactgaaggccacctatgccgaccaacgaccccgaacatcg
ttcacgccacagcaatttgtcacccccaatacgagtgctttaaacctatcggaagtgtcc
aatgactcaactgacaaattcgggaaagagcgaatgttcacctgcaaatactgcggggtt
caaatgcgagcctccaatctcggccgacacatcaaggctcgtcatgagcgagaggatggc
tcgaacccgatctacatctcgccgccggaaaccgaatctggtcgtcgaatgcaggtccgt
tgtccagcttgcaacctcattctgcgtccctcgaacttcaaccgccattgggctcgccga
cacccggcccagcccttgcccgacgtgcgagaacgacgtcaaatgtacatcgaggccgat
gaagccgagatcgatgacacggatgatggccttcaaaatggtgaaagcggcatgggtgcc
atcagtgttgagcccgtgttttacggcgaggccaatgtcggtggtgtgccattcgagatg
gacgacgaggagggctccttggaggacatcaccttcgacgatgactatgatgcccgtaat
ggtccggtcaaatattccacacctcagatgaacgcccagagcagtcagctcaacttgtcc
ggatccagttccaagcacatcccagccagtatgcgggagctcaaataccgctgcgacacg
tgcggttacgtgtcgcgtttccgacagaatctagatcggcattgcaagaaacgaacccat
tactctgaataccttcttcgcacgagcaaaaacccgcacgtctacgttcaaactccggat
caagccattcaagatgtgcctcccagtccggctaaattgccaccccctcctctttcgcaa
cgattagacctggtggaagatgaagaccaaatgatgatgttgacccctcaggtttgctta
gagggaggggcctccgaggaagaggacgacgaggaactggaggagattgaggacgatatt
caagcggatcccgtggtcgataacaatgacctggagcaagaggagagtcaaccaactccc
gaggaggaacagccctcaagaccacagccctcgccgaataagaacgatttttgcaatttc
gacttgaatgggatcctgggggattcgtcaagtgaggacgatgacgatggcattattaat
gttgactacaagatcctctga
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integrated database retrieval system
