Tigriopus californicus (tidepool copepod): 131878512
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Entry
131878512 CDS
T09700
Name
(RefSeq) uncharacterized protein LOC131878512
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04080
Neuroactive ligand-receptor interaction
tcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
131878512
04082 Neuroactive ligand signaling
131878512
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tcf04040
]
131878512
Ion channels [BR:
tcf04040
]
Ligand-gated channels
GABA-A
131878512
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
131878512
NCBI-ProteinID:
XP_059080486
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All DBs
Position
3:6333103..6348070
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AA seq
841 aa
AA seq
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MTFHYESSTSQSRLSPEHWFQMEREENYNIQHPERSGQHLRHQLRIRSSNVSRAFPPSNP
FHRGSHGPEQLQQQQPQVHLPKFIHITSNMIKMMMLSNENGTEAEGASSFRSRRVRRQED
DDAFSKNITKILEDLLKDYDKTERPSFRSGKATKVKINILVRSMGPISEEAMDYSMDCYF
RQYWRDERLSFTGVKKNAHSLSINQLSLNVKMLEKIWKPDTYFHNGLSSYIHTITRPNKL
LRISEHGDITYSMRLTIKAKCPMMLRSFPMDWQSCPLVIGSFAYTEDEVLYIWSNPQNAV
GYEGKLELSQFDIKHTSFRGLNYSRGHSSGRYSVLQVVIALQRHTGYFLIQIYLPCTLLV
IMSWVGFWLNREATSDRIGLGITTVLTLSTLSLESRTSLPKTHYATALDWFIICSFGYCV
ATLLEFAAVHYFTKVGSGEVFGFDEPSLAEVELLENEKFQTTQEDIEIVIEDHPLKQSGS
SSHMEMTHHPLSNHSEGEDDNWLDIENSSSDVWEPSPSTIPPPPPVMPEEIPTYYCPQHS
RPCLDQVPKLVTVMASQSSSSLTKQGRGFFGGRGLKKRLRWKRSRESDVTSPQFTQTPFY
LTNSVNPAFNVDRMNRQCESHVLGDNAQLDLCDSTLSEESRLQGLRYHSLESVDQLESLE
YGLPLPAIRYSSNHSCEQQPQSETLKLNPRPNGLLAQRGAPSSRSKKYMALSNSMSMPAM
AQADLAEDSTRVPPYRMAKNGVEPRRRCSQAIAQTQTIRRPRCWRQFIFCLLANENYRRE
RQKEAAKSGTTNSTSKIDSVARILFPVSFGLFNLAYWYSYFQAQAPFAWEDHPLKGNTLS
H
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgaccttccactatgaaagttccacctctcaatctcgactatcccccgagcactggttt
caaatggaacgcgaagaaaactacaacatccaacaccccgagcggtcaggccaacatttg
cgccaccaactccgaattcgatcctctaacgtttctcgagcgttcccgcctagtaatccc
tttcatcgtggatcccacgggccagagcagctccagcaacaacagccacaagtgcatctg
cccaaattcattcacatcacttcgaatatgattaagatgatgatgctgtccaacgagaat
ggcactgaggctgagggggcatcatcctttcgaagtcgacgagttcgacgtcaagaggac
gatgatgcattcagtaagaatatcaccaagatcctcgaggatttactcaaagactacgac
aaaactgaaagaccatcgtttcgctcaggcaaggccacaaaggtgaaaatcaatatcctc
gttcgaagcatgggtccaatatcggaggaggctatggactactcgatggattgctacttt
cgtcaatattggagagacgaacgactgagtttcacgggggtgaagaagaatgcccattcg
ctgtccattaatcaactcagtctcaatgtgaagatgttggagaaaatatggaagcccgat
acgtacttccacaatggtcttagttcctatatccacacgattacccgaccaaacaagctc
ctgcgaatttcggagcacggtgatataacgtactcgatgcgccttacaatcaaagccaaa
tgcccaatgatgttgaggagtttccccatggattggcaatcttgcccgttggttatcgga
agctttgcctacactgaagacgaagtgctttacatctggtcgaatcctcaaaacgccgtg
ggctacgaaggaaaacttgaactctctcaattcgatatcaagcacacgtctttcagagga
ttaaactattcgagaggacacagcagtggccggtattcggtgcttcaagtggtaatcgct
cttcaaagacacacgggctacttcttaatccagatctatttgccttgtacccttctggtc
atcatgtcttgggtggggttttggttgaaccgcgaggctacatccgatcgtattggatta
ggaattaccacggtgctgaccttgtcaacactgtccttagagagtcgaacaagtttgcca
aaaactcattacgccaccgccttggattggttcatcatctgcagctttggatattgcgtg
gccacgctcctggaatttgctgccgttcattacttcaccaaggttggaagtggcgaagtg
ttcggctttgatgagccatccttggcagaggtcgagttgctggaaaatgaaaagttccag
acaacccaagaggacatcgagattgtgatcgaggaccacccactcaaacaaagcgggtcg
tcttcccacatggaaatgactcatcacccactttcaaatcactccgagggagaggatgac
aattggttagacatagaaaactcatcctccgatgtgtgggagccttctccctcaaccatt
cctccccctcctcccgtgatgccagaagaaattccaacctattactgtcctcaacactca
cggccatgtctcgatcaagttcccaaattggtcaccgtgatggcgagccaatcttcaagt
tccttaaccaaacaggggcgaggatttttcggaggtcgaggcctcaagaagaggttaaga
tggaagcgatcccgggagagcgatgtcacatctcctcaatttacccagactcccttttac
ttgacaaactccgtaaacccagcctttaatgtggaccgcatgaaccgccaatgtgaatct
cacgtgttaggtgataacgcccagctggacctttgcgatagtactctgagtgaggagagc
cgacttcaaggattacgatatcactccttggaatcagttgatcagttagagagcctcgaa
tacggtttaccacttccagccatccggtattctagtaaccacagttgtgagcaacaaccc
caaagcgagaccttaaaactgaatccccgtcccaacggactcctggctcaacgaggagct
cccagtagtaggtccaagaagtacatggccttgtccaactcaatgtcgatgcccgccatg
gctcaagcggacttggcagaggattctacaagggtgccgccctaccgaatggccaagaac
ggggtcgagccgcgtcgacggtgctcgcaagccatcgcccaaacacaaactataagaagg
ccgaggtgctggaggcagttcatattttgtcttctggccaacgagaattatcggagagaa
cggcagaaggaagcagctaagtcgggcacgaccaattccacgtcgaagatcgattcagtg
gctcgaatactattccctgtgtcctttggtctcttcaatctagcttattggtacagctac
ttccaagctcaagcaccctttgcttgggaagatcacccactgaaaggcaacacattgagc
cattga
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