Tigriopus californicus (tidepool copepod): 131878526
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Entry
131878526 CDS
T09700
Name
(RefSeq) uncharacterized protein LOC131878526
KO
K11967
ankyrin repeat and IBR domain-containing protein 1 [EC:
2.3.2.31
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcf04121
]
131878526
Enzymes [BR:
tcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
131878526
Ubiquitin system [BR:
tcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
131878526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
Ank_2
Ank
IBR_1
Ank_5
Ank_4
IBR_2
Ank_3
UBA_ARI1
zf-C3HC4
zf-C3HC4_2
Rcat_RNF216
Ariadne
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
131878526
NCBI-ProteinID:
XP_059080503
LinkDB
All DBs
Position
3:complement(8389327..8396065)
Genome browser
AA seq
1623 aa
AA seq
DB search
MGSSSSKFKKYLQHGDEYAAMQVYQSSSDLRKALQPNFSYGDHHNHNTPLHYASRHGMKH
LIRTFINDLDGNPNKRNSLRQTSLHCVCDVKQQKSPSALERRAYSVILLLSWRGPFLSTG
ERERMDVNARDNGGNTALHYAAQSGLGKCVEYLVAHGADLFIENKEGLTACDLAMRENDH
RIAQFLESKMVFSGTPESASGESSGARASSFDGEEEVYCGLRAQDLQEAKDQLLVETADM
LHIPLFTAEALLRHSEWSRENLLEHWMRDPIQTCQLAGVQTPFSALRHSSLYQFEQISSE
YHDQTRQQDYSNKGRPAHASLKSIKGPTNKALHPTPKIHSENSFIVDEELAEEGLLCEIC
CDLMTPRPVDNDLSCGHRFCTRCWKNYLHNKIQEGNTQNILCPAYECEILVPNQVIECYV
SPQMARKFLKFDINAFVETKKDIKWCPFPSCQRAVNLPTTENEVSGIAANVQVSHAVDCG
GGHFFCWECGSEAHAPAACHLWKMWLNKCARVNPGELTLTSQDYQDAANCLWLITNSKPC
PNCQSPIQKNDGCNHIKCSKCKHDFCWVCLESWKKHSTATGGYFRCNRYTTTPRVDEGVD
KQVNRMGEKTKRLRELNRFVHYYTRYKNHENSRHMEEPLLHSARRKRELLESSLERNRKR
RGGTEDRQASRGILEDEQDNILSRNTKFYEDGVWELVKARLILAGSYAYGFYLSEDNNNG
QPQNQNRVAIFEFMQNELEEMTERLSEMIARPYLRTPRRTIIQTFHLCRRKRQEFLRACY
RGLVPPEPNSIEPLRVHHQANLAPSSLSGSHTNYSNHLRSREINSMVGLNIDRKRLVECI
TDDIYGSGPVWKRDDKQMTVGRHNCSKCRRPSCTTQMCISTSELHHHREKYGTNFMSLRR
EKPPNITSGTTGSFSLASNNCSTRSGPRVLGNRRHTEYVSSSTVQREGNLDLMMAVELSH
MQMNPNERGNGVPMRAMGPRPSKSDDNILSSSLGTNRLDVEQLSLSSSKEELRQINMAIE
LSLNSDSMPGRNEVWQEQVFVSPRRSEGLERVIKRSSRGKDTQGEQSDDNCSSHKEPKVK
VFPSEPRQKSITDSSNETVSSFLKSLTIKEAEIDTYSVSPQKKSRKDSCSRSLIQDHSSS
PSLNDQPPLAKRSGEIEDGRFKVGEFQVSSEKEGKSLEGSPHMKRSQSLGDMEDEAKPQS
ASSKDRNSYTQSKEVAATSDQDQYPGLVYVLSRKESKNLTSKKQSEDNSESIPTNTRVGP
AARKSNTAPRNEKPFVETATKPSTEDEPNRQIGEQPTPIVVASTLPPTPSQAQLPSSVNG
QQKRIRPRFVRQKSFEIDSDSTDVETSYHDNPILRKSKSAGQELTKEVKETDHFYNIPTK
DETSSSSTTKAKKPTKKPGLTIKIENSSFIEDSESELDALAKSPTFHISGVSISRSPASP
GMRSPKKGANIGYSDSPITNQLSGCSSPSLVDISNRYRSSSLVVPPPSSLFSMSPASPGS
KSLHLCNFSTSPRHHSRASPNTSKFLFPPHPMEPGNANPDPDPGERGPGETSFSSVLHIH
DSYLSSDDFHEALFLEKSPKAVKRKRKSKKSVTIGGTSSVGNSASSLVPEKAPSKENKSL
TAT
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atggggagctcatcctccaaattcaagaagtacctgcagcatggggacgaatatgccgcc
atgcaagtttaccaaagttcgtcggacctacggaaggcccttcagcccaacttcagctac
ggggaccaccacaaccacaatacacccctccattatgcctcacgacatgggatgaaacat
ttgattcgaacttttatcaacgacttggatggtaatccgaacaaacgtaatagtctccgg
caaacctcgctgcattgcgtgtgcgatgtgaagcaacaaaaatcaccctcggccctggag
cggcgagcctatagtgtgatccttctgctcagttggcgaggaccgttcctttccacgggt
gaaagggagcgcatggatgtgaacgctcgggataacgggggaaacactgcccttcattat
gctgctcaatcggggttgggaaagtgtgtggagtatcttgtagcccatggcgctgattta
ttcattgagaacaaggaaggattgacggcatgtgatctggccatgagggaaaatgatcac
cgcattgcacaattcttggagtcaaagatggtgttcagtggtacccccgagtcggcctct
ggggaaagtagcggggcccgagcttcaagttttgatggcgaagaggaagtttattgcggt
ttacgagctcaagatctccaagaagccaaggaccaattgctagtggaaacggcagatatg
ttgcacattccactctttactgctgaagctctcctgagacattccgaatggtcacgggaa
aatttactagagcactggatgcgagatccgattcagacttgtcagcttgcgggcgtccag
acccccttctccgctttacgccactcatctctctatcagtttgagcaaatttcatccgaa
tatcatgaccaaaccagacagcaagactactcaaacaagggcagacctgcacatgccagt
ctcaagtcaatcaaagggcccactaataaagcgcttcatcccacacccaaaattcactcg
gagaatagcttcatcgtcgatgaggaactagccgaagaaggacttttgtgcgagatttgt
tgcgacctcatgactccacgacctgtggacaatgatctgagctgcgggcaccgcttttgc
actcgatgttggaagaattatcttcataataagatccaagagggcaacacccaaaacata
ctttgcccagcgtacgagtgtgagatattggtccccaaccaagtcatcgaatgttatgtc
agccctcaaatggccagaaagtttttaaagttcgacatcaacgctttcgttgaaacgaaa
aaggacatcaaatggtgccctttcccctcatgtcagagagcggtgaatcttcccaccacc
gaaaacgaggtgagcggaattgctgccaacgtccaagtttcccacgctgtggattgtgga
ggtggccatttcttctgttgggagtgcggctccgaagcccatgcccctgcggcttgtcat
ctgtggaagatgtggctcaacaagtgcgctcgtgtgaaccctggcgaactcacgttgacc
tcgcaagattaccaggacgcagctaattgcctttggcttatcacgaactccaagccatgt
ccaaactgccagtcgcctatacagaagaacgacggttgcaatcacattaagtgctcaaaa
tgcaagcatgacttctgttgggtgtgtctggagagctggaagaaacacagtactgccacc
ggtggctactttcgctgtaatcgttacacaaccacgccgagggtggatgagggagtggat
aagcaggtgaaccgaatgggcgagaagaccaagaggctccgcgaacttaaccgatttgtg
cactactatactcgttacaagaaccacgaaaattctcgacacatggaggagcctctcctt
cactcagcccgccgtaaacgagagctcttggagtcgtctcttgagagaaataggaagcga
cgaggtggaacagaggaccgtcaagccagcagagggatattggaggatgagcaagacaat
atattgtccaggaacaccaagttctatgaggatggtgtctgggagctagttaaggctagg
cttattttagctggtagttacgcttatggtttctatctctcggaggataacaacaatggc
caaccacagaatcagaatcgagtagctatttttgagttcatgcaaaatgagctggaagag
atgacagagcgtctctccgagatgatcgcccgaccctatctacgtacaccacgaagaacc
atcattcagacattccatctttgtaggagaaaacgtcaagagttcctccgagcgtgctac
agaggtcttgttccaccagagcccaattctattgagccattgcgtgtgcatcaccaagcc
aatctggcaccaagctcgctctctggcagtcatacaaactattccaatcatttgcggtcg
agagaaatcaatagcatggtgggattgaacatcgatcgaaaaagattggtcgaatgcata
accgacgacatctatgggtctgggccagtgtggaaacgagatgacaaacaaatgaccgtg
gggcgacacaactgctcgaaatgtcggaggcccagttgcaccacacaaatgtgcatctca
acctccgagctccatcaccaccgcgagaagtatggaacaaatttcatgagcttgcgtaga
gaaaagccgcccaacatcacgagtgggaccactgggtcgttttctttagccagcaataat
tgcagcacgaggtcgggcccaagggttctaggaaatcgtcgccatactgaatatgtctcg
tcctcaacggttcaaagagagggaaatcttgatctaatgatggcagtcgagttatcccat
atgcaaatgaatccaaacgagcgaggaaatggtgtgccaatgagagccatgggacccagg
ccgagcaagtctgacgacaacattttatcctcctcgttggggaccaatcgattagacgtt
gaacaattatccctatcgtcttcgaaagaagaactgcgtcaaatcaatatggccattgaa
ctttcattgaactcggattccatgccagggcggaacgaggtgtggcaagagcaagttttc
gtctccccccgcagatcggagggtttggagagagtcataaaacggtcttctcgggggaaa
gacactcaaggggaacagtccgacgataattgcagctctcacaaagagcccaaagtcaaa
gtgtttccctcagaaccacgtcaaaagagtataacggactcttctaatgagaccgtcagc
tcgtttctgaagagcctcacaatcaaagaagcggagatagacacatattccgtatcgcct
caaaagaaaagtcgaaaagatagttgctctcgttctttgattcaagaccattcctcctct
ccgtctttgaatgaccagccacctttagccaagagatcaggggaaatcgaagatggtaga
ttcaaggtaggagagttccaggtcagttctgagaaagaggggaaaagcctagagggcagt
ccacatatgaaacggtcacaatccttaggggatatggaggacgaagctaagcctcaatct
gcttcttcaaaggatcgaaattcatatacccagtccaaagaggtcgctgccacgagtgat
caagaccaatatcctgggcttgtttatgtgttgtccaggaaggaaagtaaaaacctcact
tctaagaaacaaagtgaagacaattccgagtcaatacccactaataccagggtcgggcct
gctgctcgaaagtctaatactgcgccgaggaatgaaaaaccatttgtcgaaacggcaaca
aagcccagcactgaggatgagcccaacagacagattggtgaacaaccaacgcctattgtg
gttgcttctacgttgcctccaactccatcacaagcccagttaccaagttcggttaatgga
cagcaaaagcgaatccgaccgagatttgttcgtcaaaagtccttcgaaattgatagcgac
agcacggatgtggaaaccagctaccatgacaaccccatcctaagaaagtccaaaagcgca
ggccaagagcttacgaaagaagtcaaagaaacagaccacttctacaacatcccaactaaa
gatgagacatcatcgtcatcgaccacaaaggccaagaagccaacgaagaagcctggcctc
accatcaaaattgaaaacagctcattcattgaagattctgagagcgaattggatgccttg
gccaaatcgccgacttttcacatcagtggtgtttccatttcccggagtcctgccagtcca
gggatgcgctccccaaagaaaggggccaatataggctactcggattcgcctataaccaat
caattgagtggttgctcatcaccaagtctggtggatatctccaaccgatatcgttcatca
agtcttgttgtgccaccgccttcttctctgttttcaatgtcccccgccagtccaggttcc
aagtcccttcatctttgtaacttttccacgtcgcctcgtcatcacagccgagcttccccc
aacacctccaagtttctgtttccaccacaccccatggaacctggtaatgccaacccagat
cctgatcccggcgaaagagggccaggcgagacctcgttcagttctgtcctccatattcat
gacagctacttaagcagtgatgattttcacgaggctctcttcctagagaaatctcccaaa
gcggtgaagcggaaacgaaaatcgaagaagagtgtaaccattggtggaaccagtagtgtg
ggtaatagtgcttcgtctttggtccccgagaaggcaccgagcaaagagaacaagagcttg
acagctacgtag
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integrated database retrieval system
