Tigriopus californicus (tidepool copepod): 131878530
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Entry
131878530 CDS
T09700
Name
(RefSeq) uncharacterized protein LOC131878530
KO
K16912
ribosomal biogenesis protein LAS1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcf03009
]
131878530
Ribosome biogenesis [BR:
tcf03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
131878530
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Las1
Motif
Other DBs
NCBI-GeneID:
131878530
NCBI-ProteinID:
XP_059080509
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All DBs
Position
3:8420876..8424213
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AA seq
623 aa
AA seq
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MKVRDLKVKDKDWSRHPAHESLQITPWISDHEWMSVAESLLSLKSAHWSWALRVIQRWSK
AVERLPMGVEMTLYVVPILLELDQSPKSEAAQSVLTLSMGGALNRVLNVLSQWADRRLGL
THYHDMARVLGLPVWIVDLRHETTHGQMPNPSQLLQGLQCTMKWTLRNYWRPEYDHLSQV
IEKKDDIRHSREYQKLHKLLDCYGYLRLYVLWGTTNLGQLRDQTELYEHVTELWEHFQFH
KLGPKRQRAALSIDEIGVKDAVMRIEDELVEVLSSADEFNRDFVADALVTSLIEDELLFP
SNEMMETLKEHEDEDELRVLPKNLEMQWWDVLKLLTQYDHITLLVERLLVHGCSKDISPK
HAILAQAWIRLICSESSTDAPSAKNSEKSSKKRKKQKKLPTPTQVTTTQFTLLDKEDVQS
NPKFNEIVDNCLLEPTPFILGVMKCLLRLQTPRLSTLTENKVIQLMKIHLGQSLSNTNVP
VDYEIQDLTSLLPSDNSLGDACSTGSSDSKSGNRVWKKAGSKVNWASIPLGLIPGQKLSV
LTQEIISDRPSKNEPDTSSINLGADDDHVSEVRTLDWNQILQRSQTVSTSSNNLSTDSQD
QIEESDENVPAFNRNPKRKVPLK
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcagagacctgaaagtcaaagacaaggattggtctcgccatcctgcccacgaa
agtttgcaaatcacgccgtggatttctgaccacgaatggatgagtgtggccgaatccctg
ctatccctcaaatccgcccattggtcttgggccctgcgcgtgattcaacgatggtccaag
gccgtggaacgtttacccatgggggtggaaatgacactctacgtggtgcccatcttactg
gaactcgatcaaagtcccaagtccgaggccgctcaatctgtgttgaccttgtccatgggt
ggagccctgaatcgagttctcaatgttctatctcagtgggccgaccgacgtctcggtctg
acgcactatcacgatatggctcgcgttttgggcttgcccgtctggatcgtggaccttcgt
catgagacgacccatggacagatgcccaatcccagccaattgctccaaggtcttcagtgc
accatgaagtggaccctacgcaactattggcgacccgagtacgatcatctgtctcaggtt
atcgagaagaaggatgatattcgacactcgcgtgaatatcaaaagctgcacaagcttttg
gattgctatggatacttgcggctctacgttctatggggaaccactaatttgggtcaactt
cgagatcagaccgaattgtacgagcacgtcaccgagttgtgggaacactttcagttccac
aagttaggccctaagcggcaacgggcggctctaagtattgatgagatcggcgtaaaggac
gccgtgatgagaatcgaggatgaattggtcgaagtgctttcatcggccgacgagttcaat
cgagattttgtggctgatgccttggtcactagtctcatagaggatgagcttcttttccct
tctaatgaaatgatggaaacgttgaaagaacatgaggacgaggatgaattgcgtgtccta
cccaagaacttggaaatgcaatggtgggatgttttaaagcttctgacccaatatgatcat
atcactttgttggtggaacgcttgctggtacatggctgctcaaaagacatttcgcctaaa
catgcaatattggctcaagcttggattcgattgatatgctcagaaagttctaccgacgct
ccatctgccaagaatagtgaaaaatcaagcaaaaagaggaagaaacagaagaaattgccc
actccaacgcaagtcaccaccacacaatttactctccttgataaagaagatgttcaatcg
aatcccaagtttaacgaaattgtggacaactgtctcctggaaccgacaccattcattttg
ggcgtaatgaaatgcctccttcgtcttcaaactccgagactttcaactttgaccgagaac
aaagtgatccaactaatgaaaatccacttaggacaatctctaagcaatacgaacgttcct
gttgattatgagatccaggatctcacctcgttattaccaagtgataatagcttaggcgat
gcttgttccacgggctcgtcggattctaagagtgggaacagggtttggaaaaaggcgggc
agtaaagtgaattgggcctcaattcccttgggtttgataccaggacaaaaattgtccgtt
ttgacgcaagaaatcatctcagatcgtccatccaaaaatgaacctgacactagttcaatc
aacttaggagccgatgacgaccatgtctctgaggttcgaacattggattggaaccaaata
cttcaacgttctcagacggtttccacttcctccaacaacttgagcaccgattcgcaggac
cagatcgaggaatcagatgagaatgtcccagcctttaacagaaatcccaaacggaaggtt
ccattgaaatag
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