Tigriopus californicus (tidepool copepod): 131878532
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Entry
131878532 CDS
T09700
Name
(RefSeq) paired box protein Pax-6-like
KO
K08031
paired box protein 6
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcf03000
]
131878532
Transcription factors [BR:
tcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
131878532
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
HTH_32
HTH_23
Homeobox_KN
HTH_Tnp_IS1
DUF6115
HTH_28
Motif
Other DBs
NCBI-GeneID:
131878532
NCBI-ProteinID:
XP_059080511
LinkDB
All DBs
Position
3:8432862..8461693
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AA seq
573 aa
AA seq
DB search
MKDFRYQQYPASLRTDSVTGHSGVNQLGGVYVNGRPLPDSTRQKIIELAHSGARPCDISR
ILQVSNGCVSKILGRYYETGTIKPRAIGGSKPRVATSNVVQRISEYKRECPSIFAWEIRD
RLLSDGICNNDNVPSVSSINRVLRNLASAKEQNVQHHLSSAAADSVYDKLRMFNGQAAAS
WAWYGANPTSHLGLASPTAAPSPHHNPSGGVGGGGGGGVSALGGGGGTHPGLISPHQFGR
DSSEEKKPGSGGFSEFGSDSGVNEATSDGNSDHNSSADEDSQLRLRLKRKLQRNRTSFST
EQIEQLEKEFERTHYPDVFARERLAEKIGLPEARIQVWFSNRRAKWRREEKLRNQKRDPN
APPSHNSTTGAVVSGGNSVGTALSSDGGLNNNNNNGGNGATSHNGTESNVLNGPSNGGVG
GSGTGSDSPLTPGPTPPTSSVTAAAMASRLPFQSSFNSMYPSIPQPIGSMADSYCPSSFS
SSLSSMSAQTCLQQQRDAAAYSYSMFHHDPLSLSYGRSCGAAQTNPHMANYGSSLSGGPH
GSSQGVLSPGLSVPLQVPGQTPDLTSNYWPRIQ
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatttccgctatcaacaatacccagcatctctcagaacagattccgttacaggt
catagcggagtgaatcaactgggaggagtctacgtgaatggccggcctctgcctgattca
actcgacagaagatcatcgagttggctcattccggggccagaccatgtgatatttctagg
atcctgcaagtgtccaatggctgtgtgtccaagatattgggaaggtattacgagacaggg
accatcaaacctcgcgcaataggtggctccaagcctcgagtggccacgtccaatgtagtg
caaagaatctccgaatacaagcgggaatgtccgtcgattttcgcgtgggaaatccgagac
cgactcttgtccgatggaatctgcaataacgacaacgtgcccagtgtctcttcaatcaac
cgcgtgcttcggaatttggcctcggccaaggaacaaaacgtccagcaccacctcagttcg
gcagcagctgacagcgtttacgacaagctaaggatgttcaatggtcaggcggcggccagt
tgggcgtggtatggggccaatcccacttcacatctgggtctggcctcgccgacggctgca
ccttcacctcatcataatccaagcggtggcgttggcggcggtggaggtggtggagtatct
gcccttggagggggtggcggcactcacccgggtcttatatcgcctcaccaatttggaaga
gactcctcagaagagaagaagcctggctcaggtggtttcagcgagtttggcagtgatagt
ggagtgaacgaggccacctcggacgggaattcggatcacaactcctcggcggatgaagat
tcacaactaagactccgactgaaacgaaaacttcaacgaaatcgaacctcgttctccacc
gaacaaatcgaacaactagaaaaagagttcgaacgcactcactatcccgacgtgtttgct
agggaacgtctagcagagaagattggtctgccagaagccaggatacaagtctggttctcc
aaccgaagagccaagtggcggcgagaggagaagctccgcaaccagaaacgtgatcccaac
gctcccccgtcgcataattcgacgacgggagcggtcgtcagtggcggcaattctgtcggc
acagcgctctcgagcgatggcggcctaaacaacaataataataatggtggtaacggcgcc
acatcccacaatggaacagagagcaatgttttaaatggaccctccaatgggggtgtgggc
ggaagtggcacaggatccgattcacctctcacacctggtcccacacccccgacttcatcg
gtgactgctgctgccatggcatccaggcttccgttccaatcgagcttcaactcgatgtat
ccatcgatacctcaaccaattggaagcatggccgactcgtactgtcccagtagcttcagc
agcagcttgtcgagtatgtcagcccagacgtgtcttcaacaacagagagatgccgcagcc
tattcatactcaatgttccatcatgatccactctcactgtcgtacggacggtcttgtgga
gcggctcagaccaacccgcacatggccaattacgggtcatctctgtcaggtgggcctcat
ggctcttctcaaggagtactctcaccgggattgtcggtcccacttcaagttccagggcaa
acgcccgacttgacctcaaactattggccccgaattcaatga
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