Tigriopus californicus (tidepool copepod): 131878546
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Entry
131878546 CDS
T09700
Name
(RefSeq) rab GTPase-activating protein 1-like
KO
K20284
Rab GTPase-activating protein 1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131878546
Membrane trafficking [BR:
tcf04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
131878546
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3694
Motif
Other DBs
NCBI-GeneID:
131878546
NCBI-ProteinID:
XP_059080537
LinkDB
All DBs
Position
1:complement(4988576..4992720)
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AA seq
1098 aa
AA seq
DB search
MEPVETVADRGEVNDDNKTSSSSPSSADFEMLPHTAQPAQPHTDPPAGDTDPHLDLQGGN
REDLARTLSDCLQSSPEEEAANAVPAVPAVQSMVNESLHEEEEEEDGPDGENATIFHRIY
YLGAEAIEHPKDEAMIQDHMMEINRGRDAVSVRLSVPRTSDGRVSLRRETPEELMFRLPV
NRIIYFARGTAESRCFALTSIKLDRDGVAFEPRTFQIHVFRCAVAEAVDKVFVSFAQTFK
RASPQPARLLPPENFEEGEPFLFEVSLEIREKEEGKSTYEIVPRQKGFFKLRTDVEKRVV
LNVRQISRNHCHLVIERCFGMLVSPGRNVRHADMQLLERVTMTNATLVAPSDGGQSSTSG
AANCAGQIITGTWDPSEASFAMLNQETSADRSPVYMTIAADLVIAQVAEPVRFVMETKAR
IFPTSERYWYFSKKSVVKQFQIRLKRSKEPQGEKIFDLCGIDVSEEIDRVRGGSITSQIA
SLTASTLGSFRNQYGLVTVDEPISPPCEEDEDSDGEEPLLSGFGEVSKDCSGTELELWSQ
VLQEWATDNPLQFPKQLPRLVKRGIPEALRGEVWQRMTGASAHVEQTVESYRLLTTQESP
DEKVILRDIHRTFPAHEFFKEAGGIGQEALYRIAKAYSIYDSEIGYCQGQSFLIASLLLQ
MPEEQAFGVLIQVMHRLGLRDMFRENFEQLQLRLYQLDRLIEANFPDLWQHFADNGIESH
MYASQWFLTIFTAKFPLFLVFRVLDVFLLFGFDSIFQVALGILKVSKKDMLFQDFEGLMK
YFRVNIPKRYRSEENAKHLMEVAKGIKIKRLNKYEGEWLHIKAAERAREDPVIRLERENK
KLLNDNLRLDTENDNLARQLVNSKIEMRKEIDNIEDEKDLFEKEASSAKTLLQENAEENK
RLHQQVFSLKELLKREVAKSDAELATKANVIADYKLITSQLSEKLEKLLNQAKENTRKSQ
NSSSTTEICDSSTSSNSSSHNNPVDNDSGNLQDLDQANERVRELELELAQTKLALVETEC
RLQDVSHHMNALTMSTSSGHPESGSGSHASGSFRSTWFSKTLSSIKETTTHAAASSKDAI
RKSNSIDVLKSGGDFQSH
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgttgaaacggtggccgatcggggtgaagtcaacgacgataacaaaacctct
tcctcctcgccctcttcggccgatttcgaaatgttgccgcatacggctcagcccgcacag
ccgcacacagacccgcctgcgggtgatacggatccgcatttggacttgcagggtgggaat
cgcgaagatctggcccgaaccctttcagattgcctgcagtcctcgccggaggaagaggcg
gctaatgcggttcctgctgtgcctgcggttcagagcatggtaaatgagagtttgcacgaa
gaggaagaagaggaggacggtccagatggcgaaaatgccaccatttttcatcggatttac
tatttgggcgcggaggccattgagcatcccaaagatgaggccatgattcaagatcacatg
atggagattaaccgtggccgtgatgcggtgtcggtgcggctcagcgtgccgcgcacctct
gacggtcgggtgagtctacgaagggagacgcctgaagagctcatgttccgcctaccggtc
aaccgcattatctactttgcccgtggcacggccgaatcgcggtgcttcgctctgacttcc
atcaaattggatcgtgatggggtggccttcgagccccgcacttttcaaatccatgtattt
cgttgcgcggtggctgaggccgtggacaaggtctttgtgtcctttgctcagacctttaaa
cgggcttcgccgcagccggcccgtctcctgccacccgagaactttgaagaaggtgaaccc
ttcttatttgaggtcagtttggagattcgtgagaaagaggaaggcaagagcacttacgaa
attgtaccgcggcaaaaaggcttcttcaagctccggacagatgtcgagaagagagtggtc
ttaaatgtacggcagatttcgcgcaatcattgtcatttggtcattgaacgttgtttcggc
atgttggtcagtcctgggcggaatgtgcggcacgcggacatgcaattgttggaacgcgtt
accatgaccaatgccacgctggtcgcccctagcgacggcggtcagagctccacgagtggt
gccgccaattgtgccggacagatcatcaccgggacttgggatccgagcgaggcctcgttt
gctatgttgaaccaagaaacctcggccgaccggtccccggtgtacatgacaattgcagcc
gatctggttatcgcgcaagtggcggaacccgttagatttgtcatggagacgaaggcccga
atctttcccacgtccgagagatattggtacttttccaaaaagagcgtcgtgaagcaattc
cagatccgactcaaacgatccaaggaaccgcaaggcgagaagatttttgatctgtgcggc
atagatgtcagtgaggagattgatcgggttcgtggtgggagtatcacatctcagatagcc
agcttgacggcatcgactcttgggtcgtttcggaaccaatatggtcttgtgacggtggat
gaaccaatatctcccccctgtgaggaggacgaagattccgatggcgaggagcccctactc
tccggattcggcgaggtcagcaaggactgcagtggcaccgagttggagctgtggagccaa
gtcctccaagagtgggccactgacaatcctttgcagttccccaaacagttgccacgcttg
gtcaaaaggggcattccggaggcactccgaggggaggtgtggcaacggatgaccggggct
agtgcccatgtcgagcaaaccgttgaaagctatcgccttttaaccacacaagagtccccg
gacgaaaaagtcattcttcgtgatattcatcgcacgtttcccgctcatgagttcttcaaa
gaagcgggaggcatcggccaagaggctctttatcgcattgccaaggcttattccatctac
gattccgagatcggatactgtcagggtcaaagcttcctcatcgcctcgctcttgcttcaa
atgccggaagagcaagcttttggagttctaatacaagtcatgcatcgtctgggtctccgg
gatatgtttcgggaaaatttcgaacagcttcaattgcgcctgtatcaattggaccgactc
atcgaggcgaactttcccgatctatggcaacactttgccgacaacgggatcgaatcccac
atgtacgcctcccaatggtttctgaccatctttacggccaaattccctttgtttctcgtg
ttccgtgtgctggacgtgttcctgcttttcgggttcgattccatcttccaagtggctctg
ggcatcttgaaagtgtccaaaaaggatatgcttttccaagatttcgagggcttgatgaag
tatttccgtgtgaatatcccaaaacgttatcggagtgaggaaaacgccaaacatctgatg
gaagtggccaaggggatcaaaatcaaacgcttgaacaaatatgaaggggaatggctgcac
atcaaagcggctgaacgggcacgagaagatcccgtaattcgcttagagcgcgagaataag
aagcttctcaatgacaatctccgattagacaccgagaacgacaacctggcccgtcaattg
gtgaactcgaaaatcgagatgcgcaaggagatcgacaacattgaggatgagaaagatctc
tttgagaaggaggcctccagcgccaagacattattacaggagaacgctgaggagaacaag
cgacttcatcagcaagtattctctctcaaggaattgttaaaacgagaggtggccaaatcc
gatgccgaattggccaccaaagccaatgtcatcgccgactataagctcatcacttctcag
ttgagcgagaaattggagaaattactaaatcaagccaaagaaaacaccaggaagagtcag
aattcatcttccaccacggagatatgtgatagtagcaccagtagtaatagcagtagccac
aacaaccctgtggacaatgacagtggcaatctacaggatctggaccaagccaacgagcgg
gttcgcgagctagagttggagttggctcagaccaaattggctttggtggaaaccgaatgc
cgcctacaagatgtctctcaccacatgaacgccctgaccatgagcacttccagtgggcat
cccgaatccggcagtggctcccacgcctcgggctcgtttcgaagcacgtggttctccaaa
accctgagttcgatcaaggaaactaccacccacgctgcggcctcatccaaagatgccatt
cggaagagcaattcgattgatgtactcaaaagtggtggagacttccaatcgcactga
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