KEGG   Tigriopus californicus (tidepool copepod): 131878558
Entry
131878558         CDS       T09700                                 
Name
(RefSeq) elongator complex protein 2-like
  KO
K11374  elongator complex protein 2
Organism
tcf  Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:tcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tcf03016]
    131878558
Transfer RNA biogenesis [BR:tcf03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    131878558
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 EIF3I WD40_Gbeta Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_2nd NBCH_WD40 Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N Beta-prop_WDR41 WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_HPS5 Tricorn_2nd Beta-prop_IFT140_2nd Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 131878558
NCBI-ProteinID: XP_059080548
LinkDB
Position
3:<10519342..10521850
AA seq 780 aa
MKLEQIYVAAGCNRFLKCLSWRKDLLLYGSCNSVVLVKKLSKSDDFEVLKSFVAHSDDVR
CVSWMTDDIFVSTSSDSTAIVWKRLADFSFVPWKILKGHASSVTACSGYQHESTLWIATA
SGDSSVKMWKIDLNMMKEDGEETSCQTIDLKSGFALEVKFHVLDGNVPLLVVARDNSKLQ
VYGRDPKGKVESNDLTLIHNLSGHDNWIVSLDLIQVQDDYLLASGSQDSFIRVWRLSPRT
EAQAKMVQKSVKDSKDEEIKMKEEIVGMKCFSETKETKYFAIILETVLAGHEDKVQSVQW
RPRFEDQSLTLLSCSMDKTVIVWTSSPDLGEIWEQSARFGEVGGNTLGFMGCQYDDNAEQ
ILGYSFTGSFHYWANVNAEWKPFKTIGGHFGPVEDLDWERNGRYLVSTSLDQTTRLHAPY
RVSNTSEAVSWHELARPQVHGYDLTCITMLPNHRFASGAEEKIVRTFETTRTFLANLRSI
SKETIQENENMVPRMALVPSLGLSNKGVNADENEGDSNSITYDVFETPPTEETLYQQTLW
PEVYKLYGHGYEIFCLASNAQGTLIASACKASKAEHAEVILWSVDSWEIAQRLSGHDLTV
TQMAFSPNDQYLLTVSRDRTWCLFGKSGETYTKIQRSKDKAVHQRLIWSCSWSEDSKFFA
TCSRDKKLAMWKLEEDKEVRVSLGCREVQSLQDSITAVAFAPNLEGGQKYVVACGLENGS
IMLISFDPKADKEWNVVKHLGPNDAHHKTVKRLKFARHGDSIILASCSADHSVKLFKLIM
NT seq 2343 nt   +upstreamnt  +downstreamnt
atgaaattggaacagatttacgtggcagccggatgcaaccggttcttgaagtgcttgtct
tggcgcaaggatctcttactctacggatcttgtaactctgtcgtgctagtgaagaaattg
tccaaatcggatgattttgaggttctcaaatcgttcgtggctcattctgacgacgttcga
tgtgtgtcttggatgacggacgatatattcgtgtccacatcctcagattccacagcaatt
gtttggaagcgactggctgatttctcttttgtaccatggaagatcttaaagggtcatgcc
tcttcggtcactgcctgctctggatatcaacatgaatccaccctatggatcgctacagcc
tcgggagactcgtcggtgaagatgtggaagattgatctaaacatgatgaaggaagacgga
gaggagacgtcctgtcaaactattgatctgaaaagcgggtttgctttggaagtgaagttt
cacgttcttgatggaaacgttccactattagtcgtagctcgagataattccaagctccag
gtatatggacgagatcccaaaggcaaagtggagtcaaacgacctcaccctgattcacaat
ctgtctggtcatgacaactggatcgtcagcctggatctgatacaagtccaagacgattac
ctgttggcgtcgggaagtcaggactcgtttattcgggtttggagactctcgcccagaaca
gaggctcaagcgaaaatggtgcaaaagtctgtaaaagactcgaaggatgaagagatcaaa
atgaaggaagaaatcgtgggtatgaaatgcttctcggaaactaaggaaaccaaatatttt
gccatcatccttgaaacagtcctggcaggccatgaagataaggtgcaaagtgtccaatgg
cgcccaagatttgaagatcaatcactgaccttgctttcttgctcaatggataaaactgtc
atcgtctggacgtcaagtcctgatttgggagagatttgggaacagtctgcaaggtttgga
gaagtgggaggaaataccctgggtttcatgggatgccaatacgacgacaacgcagagcaa
atccttggatatagtttcacgggctcatttcactactgggccaatgttaacgctgagtgg
aaaccattcaaaacaataggtggacattttgggcccgtggaagatcttgattgggagcgc
aacggaaggtatctcgtttcgactagcttggatcagaccacgaggttacatgctccatat
agagtgtcaaatacaagtgaagctgtgtcttggcatgaactggctcgtcctcaagtgcat
ggttacgatttgacatgcatcaccatgttgcccaatcaccgattcgcctctggtgcagag
gaaaaaatcgtccgtactttcgaaactactcggactttcctggctaatctaagatccatc
tccaaagagactattcaggaaaacgagaacatggtgccacgaatggcgttggtgccatct
ctcggtctctcaaacaagggcgttaatgctgacgaaaacgaaggcgattcaaattcaata
acttacgacgtgttcgaaaccccacccactgaagagactctctaccaacaaactctatgg
ccggaggtttataagctctatgggcatggctacgagatcttctgtctggccagtaatgcc
caagggaccttgatagcctcggcctgtaaggctagtaaagctgagcacgcggaggtcatc
ttgtggtcggttgactcatgggaaatcgctcaacgattgtccggtcatgacctcacggtg
acgcaaatggcgttttcacccaacgaccaatatcttctcacggtttccagagaccggact
tggtgtctgtttgggaagtctggagagacgtataccaaaattcaacgatccaaggacaaa
gctgtccatcaaagactaatttggtcatgcagttggtcagaagattcgaaattttttgcc
acgtgttcccgagacaaaaagttggcaatgtggaaactcgaagaagataaggaagtaaga
gtctcgttagggtgtagagaagttcagtctctccaagattccatcactgctgtggctttt
gcgccaaatctggaggggggccaaaaatatgtcgtggcttgtggactggagaatggaagt
atcatgctgatctcatttgatccaaaagctgataaagaatggaacgttgtgaagcatttg
ggaccgaatgatgctcatcataaaaccgtgaagaggcttaaatttgcccgacatggtgac
tccatcatcttagcctcatgcagcgctgatcactcggtgaaactgtttaagctgattatg
taa

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