Tigriopus californicus (tidepool copepod): 131878562
Help
Entry
131878562 CDS
T09700
Name
(RefSeq) cytoplasmic dynein 2 intermediate chain 2-like
KO
K22868
WD repeat-containing protein 34
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tcf03037
]
131878562
Cilium and associated proteins [BR:
tcf03037
]
Primary cilia and associated proteins
Dynein and associated proteins
131878562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_RIG_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
131878562
NCBI-ProteinID:
XP_059080553
LinkDB
All DBs
Position
3:complement(8314988..8317881)
Genome browser
AA seq
511 aa
AA seq
DB search
MFSDRNAMNIVEFPSCWKKSRSVKDSECQSEAQKMVIVETQVTLREDAESQTEEQAKETK
VNEDQINLPSLVKFLVKVTPIMEEELAAAARSRAFDGYELATEKTDSEMRKLHVLVNGNQ
EDIRVSGLTWGPSGSVMAVSYEMETHMDWCDHLTQLCIWNINRRDFDPNKPYKIIPASSC
LTVVQFHPRDPAYVAAGGFTGEIYLWSVSREQDPLVANSSSMSGHREKITSLHWINATTT
AEGSLRHTQLLSAALDGKMILWNIDMNTQALTPSKRFWIPAEHIPRSLNAKIRARTELGI
TCLDLNKEDENIILLGTEAGAVFQGSLAAILPVQGPDKESDEGPEYLDPVSVSFQPHRGR
ILEVRCSPFARDLFFSLGSDREIRLWSLLQPHAPVAILHSEATIPLRAQWSPFRPAVLAL
TSSQGQLFLYDLRQSVSRAALSVKSSERSVALPSLSSLAFNAWTPGWIGAGDAHGGTHVW
KLPAPWSGTDQQTRDRLWITNLLTRLEDEEQ
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgttttcagaccgcaatgcaatgaatattgtcgagtttccgtcatgttggaaaaagtcg
agatccgtaaaagattcggaatgccaatccgaggctcaaaagatggttattgtggaaacg
caagtgactcttcgagaagatgccgaatctcaaaccgaagaacaggctaaggagaccaaa
gtaaacgaagaccaaattaacttgccctcattggtgaagttcctggtcaaagtaaccccc
attatggaggaggaattagccgccgctgctcgaagtcgtgcctttgacgggtatgagctg
gccactgagaaaaccgattcagagatgcggaaacttcacgtgctcgtcaacggcaatcaa
gaagatattcgtgtgagtggcttaacttggggtccctcgggatcggtgatggctgtgagt
tatgaaatggaaactcacatggattggtgcgaccacctgacgcagttatgcatttggaac
atcaaccgacgagatttcgatccgaacaagccgtacaaaatcataccggcctcatcctgt
ctaactgtggttcaatttcacccgagagatccagcatacgtggcagccggtggattcacg
ggcgaaatatatttgtggtccgtttctcgagaacaagatcccttggtggccaattcatcg
tccatgagtggtcatcgagagaaaatcaccagtcttcattggatcaatgccacaaccaca
gctgagggctccttgcgccacactcaattattgtccgcagccttggatgggaaaatgatt
ctctggaatatcgacatgaacacccaagctctgacaccttccaagcggttttggatcccg
gccgagcacattcctcgatcattgaatgcgaaaatcagagccagaacagagttagggatc
acatgtttggacctgaataaggaggacgagaacatcatactcctaggtactgaggccgga
gcggtctttcagggttcgctcgccgccattctgcccgttcagggaccggataaagagtcc
gatgagggtcctgaatatctcgatccagtcagtgtcagcttccaacctcatcgaggccga
atcttggaggtacgatgctccccatttgctcgggatctatttttttccttgggctcggat
cgagagattcgcttatggagtctcctccaaccccacgctcctgtggccatccttcactca
gaggccactatccccctacgggctcaatggtccccatttcgacccgccgtattagccttg
acatcgtcgcaaggccaacttttcctttacgacttaaggcaatccgtgtcacgtgcggcc
ttgagtgtcaaatcttcagagcggtcggtggctttaccgtcgctcagctctttggccttt
aacgcttggacaccaggttggattggggcgggtgacgcccatggcgggactcatgtgtgg
aagctcccggcgccctggagtggcacggaccaacaaacccgcgaccggctctggatcacc
aatcttctcactcggctcgaagatgaagaacaataa
DBGET
integrated database retrieval system
