Tigriopus californicus (tidepool copepod): 131878607
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Entry
131878607 CDS
T09700
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3-like
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcf04121
]
131878607
Enzymes [BR:
tcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131878607
Ubiquitin system [BR:
tcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131878607
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
Beta-prop_THOC3
zf-RING_2
WD40_CDC20-Fz
Beta-prop_EML_2
zf-rbx1
WD40
zf-C3HC4
WD40_Prp19
zf-RING_Vps41
Beta-prop_WDR3_1st
zf-C3HC4_3
WDR55
zf-RING_UBOX
zf-C3HC4_2
zf-RING_11
Beta-prop_WDR5
zf-C3HC4_4
zf-ANAPC11
EIF3I
zf-RING_5
WD40_WDHD1_1st
YfdX
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
zf-Nse
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
FYVE
Beta-prop_TEP1_C
zf_RING_Vps8
DUF1272
Beta-prop_HVO_0234
Motif
Other DBs
NCBI-GeneID:
131878607
NCBI-ProteinID:
XP_059080646
LinkDB
All DBs
Position
3:complement(8732264..8734892)
Genome browser
AA seq
546 aa
AA seq
DB search
MEGENPPKKPRLNEHEPSTSASKSAKADEEDSAQAQGCEEDDDSENCTICMEPWTNSGEH
RIASLKCGHFFGLACIERWLKSVNSHGCPNCNEKAQKRDIRVHFTLRLKAIDTSERDRAL
KDLAHAQGQLRQVQLDYKTLQVQNKLQSDEIEQLKRLCQANRSLTDSVGVSSLSSSLMVS
TKGGKPVGARALRYVKQLDIIRSILDDSGSRDRYCRLMAFNEVHAMLIVTQPSFTALAPG
FGIRRINMLDRKVGTFMALHKDSIRDMAFHPTRHDQLLSVSQDKSVRLTNVNSGQEIQRY
SCDSEVWSCAWDRDNPHQFFIGTRRSEIWLYDTRETALDPKMKLEFPAVERRPIISLAYV
QKDASSQFKMGGLLVMTLGSLWFFAQNPADANSYAPHRLKPSEPFWSMRFDNDLRLLLIS
TRPNPHSRHIVGSLTQIEVPESENQCSLIEMYNKKRGGSYTERSFLKACIFRDDQRAILV
YGRGSSGSDHKMVLEELGTEKILQEVRVPRPILDIAKFSVNGEHFVAALCECQVFIYQWM
ENTENS
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgagaatccacccaaaaagcctcgattgaacgagcacgagccttctacttcg
gcctccaagtccgcgaaggccgacgaagaagattcagcccaggctcaaggctgtgaagag
gacgacgatagcgagaattgtacgatttgcatggagccttggaccaattcgggcgaacat
cggattgcctcgctcaaatgcggccatttcttcggattggcttgcatcgagcgatggctg
aaaagcgtcaactcgcacggctgtcccaattgtaacgagaaggcccaaaaacgggatatt
cgggtgcatttcaccctccgcctcaaggccatcgacacgagtgaacgtgatcgggccctc
aaggatctggcccacgcccagggacaactcagacaagtccaattggactacaagactttg
caagtacaaaacaaattgcaatccgatgaaattgagcaactcaagcggttgtgtcaagcg
aaccgttctttgacagactcggtgggcgtctcttcgttgtcttcgtcgttgatggtgagc
accaaaggtggcaaaccggtcggagctcgggccttgcgctatgtaaagcaattggatatc
atccgttctattctcgacgattcgggctcccgtgatcgttattgtcgactgatggccttc
aatgaagtccacgctatgctcatcgtaacccaacccagttttacggccttggcaccggga
ttcggcatccgaagaatcaatatgttggaccggaaagtgggcacattcatggcgttgcac
aaggactcgattcgagacatggcctttcatcccacccgacatgaccagttgttatcagta
tcgcaagacaaatctgtccgcctcaccaacgtcaattctggccaagagatccaacgatac
tcttgcgatagtgaggtgtggagttgcgcttgggatcgagataatcctcatcagtttttc
attggaacgcgtcgaagcgagatctggctgtatgacacgcgtgaaactgcactggacccg
aagatgaaactcgaatttccggccgtggaacggaggcccattatttccttagcctatgtg
caaaaggacgcttccagtcagttcaaaatgggcggcctcctcgtcatgaccctaggttcg
ctctggttcttcgctcaaaacccggcagacgccaacagttatgcgcctcatcgtctaaaa
ccttccgagccgttttggtccatgcgctttgacaatgatctcagacttctactaatctcc
acccgacccaatccccattccagacacattgtgggctccctcactcaaatagaagtgcct
gaaagtgaaaatcagtgctcgttgatcgagatgtacaataaaaaacgaggtggctcctac
accgaaagatcgtttctcaaggcttgcattttccgggatgaccaaagagccatattagta
tatggtcgaggatcatctggctccgatcataagatggttttagaggaattgggcacagag
aagattttgcaagaagtacgggtcccaaggccaatcttagacattgccaaattttccgtc
aacggagagcactttgtggcagccttgtgcgaatgtcaagtgttcatttatcaatggatg
gaaaatacggagaatagttga
DBGET
integrated database retrieval system
