Tigriopus californicus (tidepool copepod): 131878739
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Entry
131878739 CDS
T09700
Name
(RefSeq) septin-1-like
KO
K16943
septin 4
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131878739
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tcf03037
]
131878739
04812 Cytoskeleton proteins [BR:
tcf04812
]
131878739
Membrane trafficking [BR:
tcf04131
]
Exocytosis
Calcium ion-dependent exocytosis
Septins
131878739
Cilium and associated proteins [BR:
tcf03037
]
Motile cilia and associated proteins
Sperm associated proteins
131878739
Cytoskeleton proteins [BR:
tcf04812
]
Eukaryotic cytoskeleton proteins
Septins
Septins
Group 2
131878739
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Septin
MMR_HSR1
RsgA_GTPase
GTP_EFTU
AIG1
VapE-like_dom
Ras
Roc
ABC_tran
AAA_7
AAA_16
AAA_22
AAA_29
FtsK_SpoIIIE
NACHT
Motif
Other DBs
NCBI-GeneID:
131878739
NCBI-ProteinID:
XP_059080831
LinkDB
All DBs
Position
4:complement(9458013..9463731)
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AA seq
381 aa
AA seq
DB search
MEQDNFIGFANIADQVHRKSVKRGFEFTLMIVGESGLGKSTLVNSLFLSDLYSDRKIPSV
QDRVKRTTEIQKTTMEIEEKGVKLRLTVVDTPGFGDGLEGNGSWKVCVKYVDDQFAAYFD
GESGLNRKNIVDTRVHCCLYFIPPYGHGLRQIDLEFLKRLQYKVNLIPVIAKADCLTKSE
MKKLKDRINQEIEENDIEIYQFPDCDSDEDEDFKSHDQMLKSSIPFAIIGGTNTLEIGGK
RMRGRQMPWGFVEMDNPEHSDFALLRRFLIQTHMQDLKDVTHDVHYENYRVQCLSEMAGL
QKAPSTSTSSNSSTSQQLAHIAASHSGGSTERSTHLRKNSALHKSQEELEQETEKLLAEK
DEEIKKMHAMIQQMQAKLQSN
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagacaatttcattggttttgccaatattgccgaccaggttcacagaaaatcc
gtgaaacgcgggttcgaattcaccctcatgattgtgggcgaaagtggcttgggcaaatcg
acgttggtgaattccttgttcctctcagacctgtattcggatcgtaagattccttccgtt
caagatcgggtcaagcggaccacggagatccagaaaaccaccatggaaatcgaggagaaa
ggcgtgaagcttcggctgacggtcgtggacacgcccggatttggggatggtctggagggt
aatgggagctggaaggtgtgcgtgaagtatgtggacgaccaattcgctgcgtactttgat
ggtgaaagtggactcaaccgcaagaacattgtggatacccgcgtgcattgttgtctctac
ttcattcctccatatggtcacggtttacggcaaattgacttggaatttctcaagcgatta
caatacaaagtcaacctcatacccgttatcgccaaggctgattgtctcaccaagagcgaa
atgaagaagttaaaggaccggatcaatcaagagattgaggagaatgacattgagatatac
caattcccagactgtgattcagacgaggacgaggacttcaaatctcatgaccagatgctc
aaatccagtatcccgttcgccattattggtggaacgaacactttagagattggtgggaag
agaatgcggggtcgtcaaatgccctggggatttgtggaaatggacaatccagagcattcg
gattttgctctgcttcggaggttcctgatccagacacacatgcaggatctcaaagatgtc
acacacgatgtacactacgaaaattatagggttcaatgcttgagtgagatggcagggttg
caaaaagctccatctacttccacatcctccaactctagtacaagtcaacagcttgctcac
atagcagcaagccattcgggtggatcgacggaacgttccacgcatttacggaaaaattcc
gcccttcacaagtcccaagaggaactggagcaagaaactgagaagcttctggccgagaag
gacgaagaaatcaagaagatgcacgcaatgatccagcagatgcaagccaagcttcaatcc
aactga
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