Tigriopus californicus (tidepool copepod): 131878756
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Entry
131878756 CDS
T09700
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1-like
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00270
Cysteine and methionine metabolism
tcf01100
Metabolic pathways
Module
tcf_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
131878756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcf03000
]
131878756
03032 DNA replication proteins [BR:
tcf03032
]
131878756
03036 Chromosome and associated proteins [BR:
tcf03036
]
131878756
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
tcf02048
]
131878756
Enzymes [BR:
tcf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
131878756
Transcription factors [BR:
tcf03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
131878756
DNA replication proteins [BR:
tcf03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
131878756
Chromosome and associated proteins [BR:
tcf03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
131878756
Prokaryotic defense system [BR:
tcf02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
131878756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
BAH
DNMT1-RFD
Motif
Other DBs
NCBI-GeneID:
131878756
NCBI-ProteinID:
XP_059080850
LinkDB
All DBs
Position
4:complement(1470078..1473791)
Genome browser
AA seq
1266 aa
AA seq
DB search
MTPMELSDNDVVVDDSPSEEPIDIRISAKPGPKSKTRLLQPSAIPPGTSSQRAPCGRKPG
PKSRTRVQARASIPLSAAKKRIGPKSRTRGTESQTQSPVSARNCPECQRRLDQVQMASYC
HEAAVREAVALQDKSIAVEGSESDRPQAFLADFSVIDARGHVVSFFDGLVDRGKKLYMNG
LVKSVFSDPVSESIPSGVYVRQAGPIVQWWTTGFNKGENVVIGVSTDLADYHLQLPSSEY
ARIMQSLHERTILTKMVFEIADSAFETASDITYDELLVQMEADASKHGLDFFSEEHLLNN
ARFIVDHIGSFEEAGQDGEDEALRLIDSSCMAKLVRYSGQFDRLRDKKSEIKRSRKSKKR
VTTASKKLVVKRTFSKATTTPLIRHVFESVFKHQIAVDLMNQGTGPSATAGASINPPVKA
KKVKRSNVSLLGPVINLEGQIKFYEAVEVSGTRVQVGGFVSITPEFPDTPDFIGRIVYLF
EEGAEQIAHVRHFCRGQDTVLGMTSDPEELFLTDECEDVNINDLVEAVDVEYRHTPSDWA
QYSSSDIIEVACEDFWYRFKYQANFARFESIVEIEEKMPHDKPRFCLTCHVFDENLSKRT
PRVVNGALSIDGHHYEVGDACLIDPDALPMSHVEVKVKKTPYTSKEQQIKDPEKYPEFFR
FQFSKQGVRQSNDDNPDPFRIGIIEHINSNLPEVQIKIRKILRPEHTFQDPEEANHQDLH
YVIYSNEFSFIEAKSIRGKCFLCPKELLKMDPSEWFECGTNRFYFDRTYNSFEQVFEDLG
PDVIERFSNLKHAHESGALPQINRPLKTLDVFAGCGGLSVGLEQSGVSDPIWAIESSEAP
AIAFKLSNPNCTVFHEDCNAILKNVMDGHTHDNEGRMYPQRGQVELMSAGPPCQGFSRMN
IFSEREYSQFKNSLIATYLSYCDYYRPKYVILENVMNLAMFKKNLVLKLCFRALLMMGYQ
CTFGIMQAGHFGVPQTRRRCILLAAAPTEILPNYPAPRHVFAKSALGVNVDDKLFKANVP
YLGSAPYRTITVRDAIGDLPPIQNGDNILEKCYSQPPRSHFQRRMRKSEILQDHICRKMA
PLIEMRMSLVPQEPGSDWRDLPNIEIQLSDGTFTEKLKYLYRDYASPKGSRLRGVCKCNA
DKTVKCDGFSQQGQTIIPWCLPHTANRNGNWAGLYGRIHWDGHFPTTVTNPEPISKQGRV
LHPMQHRVVSVRECARSQGFPDDYQFYGTIMEKHRQIGNAVPPPLARAIGVEILLSIAKN
VQHCSN
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgacgcccatggagctctccgacaatgacgtcgtggtggacgacagcccatcagaggag
cccatagacatccgaatctccgccaaacccggtccaaaatccaaaacgcggctactccaa
cccagtgccattccccccggtacaagttcccaacgagccccttgcggtcgcaagcccgga
cctaaatcgaggacgcgggtccaggcccgggccagtattccactgagtgcggccaagaag
cgaatcggtcccaaatcccgcacacgaggcacggagagccaaactcaatcgccggtttcg
gctcgaaattgtccggaatgtcaacgtcgcctggaccaggttcaaatggcctcgtattgc
cacgaggctgcggtaagggaggccgtggccctccaggataaatcaatcgcggtggaaggt
tcggagagcgatcgtccacaggcattcttggcggatttttccgtcatcgatgcccgtggt
catgtggtgtcgttttttgatgggctagtggatcgaggcaagaagctgtatatgaacggt
ttggtcaaatcggtcttcagtgacccggtgtccgaatcgattccatcgggtgtgtatgtt
cgccaagcgggtccgattgtccaatggtggaccacggggttcaataagggcgaaaatgtg
gtcattggggtgagcacggatctggccgattatcacttgcaattacctagttcggaatat
gcccgaatcatgcagagcctacacgaacgtacgattttgaccaagatggtgttcgaaatc
gcggactcggcctttgaaacggccagtgatatcacttatgatgagttgttggtccagatg
gaggctgatgcttccaaacatggcttggatttcttttctgaagaacacctactgaacaat
gctcgcttcattgtggatcatatcggcagctttgaagaggcgggtcaagacggcgaagat
gaagcgctgcgcctaattgactccagttgcatggccaaacttgtacgatattcgggtcaa
tttgatcggctacgtgataagaaatccgaaatcaaacggagtcggaaatcgaagaaaagg
gttacaacagcgtccaagaaattggtcgtcaagcgcaccttctccaaagccaccactaca
cccttgattcgacacgtctttgagtccgtgttcaagcatcagatcgccgtggatctgatg
aatcaggggactggtccatcagccaccgctggtgcgtctattaatccaccggtcaaagcc
aagaaggtcaaacgctccaacgtgtctctattgggaccagtcatcaatcttgagggtcaa
atcaagttctacgaagctgtggaagtgtcaggaacccgggttcaggtgggcggttttgtc
agcatcacgcctgaatttcccgatactcctgatttcattggacggatcgtttatctgttc
gaggaaggtgcggaacaaatagctcatgtccggcatttctgccgcggtcaagacacagtg
ctgggcatgacctccgacccagaagaactctttctcaccgacgaatgcgaggatgtaaat
atcaatgacctggtagaggcggttgacgtcgaataccgacacactccatctgactgggcc
caatattccagtagtgacatcattgaggttgcatgtgaggatttttggtaccgtttcaag
taccaagcaaatttcgcccgttttgagtctattgttgaaatagaagaaaaaatgccacat
gacaaacctcgattttgtctcacgtgccatgtcttcgacgaaaacttgtcgaagagaacg
cctcgtgtggtaaatggggctttatcaatcgacggtcatcattatgaagttggagatgcg
tgtttgatcgaccctgacgctttgccaatgtctcatgtggaagtgaaagtcaagaagacg
ccatacacatccaaagagcaacaaatcaaagatccggaaaaatatcccgaattttttcga
ttccagttttcgaagcaaggtgttcgacaatctaatgacgataatcctgatccatttcga
atcggaatcattgaacatatcaattccaacctccccgaggtccaaatcaaaatcagaaag
atcctaagacctgaacacactttccaagaccctgaagaggccaaccaccaagacctgcac
tacgtcatatacagtaatgaattcagctttatagaagccaaatccatccgagggaagtgc
tttctgtgtccgaaagaattgctcaaaatggatccatctgaatggtttgaatgtgggacg
aataggttctattttgaccgaacctacaacagttttgaacaagttttcgaagacctaggc
ccagatgtgattgaaaggttttcgaaccttaagcatgcccatgaatctggcgctctacct
caaattaatcgaccattgaagactctagatgtattcgccggttgtggtggattgtccgtt
gggttggaacaaagcggcgtgagtgatccaatttgggcaattgagagtagtgaagctccc
gccattgccttcaagttgagtaatccaaactgtacggtgtttcatgaggattgtaatgcc
attctgaaaaacgtcatggatggacatacgcacgataatgaaggccgcatgtatccgcag
cgcggccaagtggaactcatgtcagctggtccaccatgtcaaggcttttcaaggatgaac
atcttctctgagcgtgagtacagtcaattcaagaacagtctcatcgccacatatctcagc
tactgtgactattaccggcccaagtacgtcatcttggaaaatgtgatgaacttggccatg
ttcaaaaagaacctagtgctgaaactctgcttcagagccttattgatgatgggctatcaa
tgcacctttggcattatgcaggccggacatttcggagtgccccaaactcggcgacggtgt
attctattagcagcagcgcccacggaaatcctacccaactatccggctccccgacacgtt
ttcgctaaatctgctttaggagtgaacgttgatgataagttattcaaggccaatgtgcct
tacttgggctcagctccataccgaactatcacagttcgagacgccataggcgatttgccc
cccattcagaatggagacaatattctggagaagtgctactcacagcccccgcggagtcat
ttccaaagacgtatgaggaagtcggaaatactccaagatcatatctgtcgcaagatggcc
ccgctcatcgagatgagaatgtcccttgttccgcaagaacccggctcggattggcgagac
ctccccaacattgaaatccaattgtcagacggaacgtttacggaaaagctcaaatatttg
tatcgggattatgcgagtcccaaaggctctcgattaagaggggtttgcaagtgcaatgcg
gacaaaaccgtcaaatgtgatggtttctcgcaacaaggtcaaaccattatcccttggtgc
ctacctcacacagccaacagaaatggaaattgggcggggctctatggtaggattcattgg
gacggtcatttccccaccactgtcactaaccccgagcccatttcgaagcaaggtcgggtc
cttcatcccatgcaacatcgtgtggtttccgtacgtgaatgtgctaggagtcagggcttt
ccggacgattaccagttctacgggaccattatggagaagcatcgtcaaattgggaacgct
gttccacctcctttggctagagcaatcggagtggaaatactcctgtcaattgccaagaac
gttcaacattgttcaaactaa
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