Tigriopus californicus (tidepool copepod): 131878839
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Entry
131878839 CDS
T09700
Name
(RefSeq) neuronal synaptobrevin-like
KO
K13504
vesicle-associated membrane protein 2
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
131878839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131878839
Membrane trafficking [BR:
tcf04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
131878839
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
131878839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
MCU
Fzo_mitofusin
EMC3_TMCO1
GET2
Phage_Mu_Gam
Motif
Other DBs
NCBI-GeneID:
131878839
NCBI-ProteinID:
XP_059080957
LinkDB
All DBs
Position
1:8800372..8801597
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AA seq
161 aa
AA seq
DB search
MSDKQPPTSQPTPSADGGRPLGPDGKPLPGPQQMQQVMAQRRMAQQQAQVDEVCGIMKDN
LEKVLERDSKLNELDERADALQDGASQFEKQAGKLKNKFWLQNLKSMIMMGAVGLILLLL
VYWKFFASDPAPNYYYPPPPPPPPPGQSQGHSAADAGGASE
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataagcaaccacccacgtcacaacccactccatctgctgatgggggtaggccc
ttgggtcctgatgggaagccattgccggggcctcagcagatgcagcaggttatggcacaa
cggcgcatggcccaacagcaggctcaagtggatgaagtgtgtgggattatgaaggataac
ctggaaaaggtcttagagagagactccaaactgaatgagcttgacgagagagccgatgct
ttacaggatggagcctcccaattcgagaagcaagctggcaaactgaagaataaattctgg
ctccaaaatttaaagtccatgatcatgatgggagccgtgggattgattcttttgctcctg
gtttactggaagttctttgcgtctgacccagctcccaactactattaccccccacctcca
ccgccccctcctccaggccaatcacagggacacagtgccgctgatgctgggggtgcttcg
gaataa
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