Tigriopus californicus (tidepool copepod): 131878893
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Entry
131878893 CDS
T09700
Name
(RefSeq) general transcription factor IIF subunit 1-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131878893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcf03021
]
131878893
Transcription machinery [BR:
tcf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
131878893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
131878893
NCBI-ProteinID:
XP_059081020
LinkDB
All DBs
Position
4:complement(6866168..6867848)
Genome browser
AA seq
498 aa
AA seq
DB search
MAEQVQEFNIRMPTKNKRKKYQILKFNASLKIDPAKWTQLRMVRENNKKEYRGFGEEMPK
EGAGSEFGREQREEARRKKYGINAKKYNPDDQPWLMRIGSKKEGKQYKGLREGGVSENAA
YYVFTHSQDGSFEAHPVHEWYNFTPRVTYKTLNAEEAEEKFAERGKILNHFAVMVNRKLR
PGQTEADEDIEDEGGKKGKKGAAGKKDLKISDMDDWVDSDGALDSDSEKEKEKSDDEDGN
KKKARSKDSKKKNKKKEEADSEGFEDSDDGDGEGREVDYMSDESSASEEELQEQANTKGV
DQDEGLSKMLDSDESDTDDENKDKDKDKEENEDENGEKPKKKKKKKAAKDGDGSNGEGDS
DDEKTKKGKGSKGNSRSTTPAPDPDSKESEGKNSRADKRKALVDSMLDPRGDTSKKSRMD
TFGSSQSSLGNVDASIEEDVRRYLARKQMTTTELLKKFKTKKTGLSKEELMQQLVEALRK
INPQKKKVKGVMYLFLKS
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacaagttcaagagtttaatattcgcatgccgaccaagaacaaaaggaagaaa
taccaaatcctcaaattcaacgcctccttgaaaatcgacccagcaaaatggactcagctg
cgaatggttcgagaaaataacaagaaagaatatcgcggtttcggcgaggaaatgcccaag
gaaggggcaggctcagaatttggtcgagaacaacgagaagaggcccgtcgtaagaagtat
ggcatcaacgccaagaagtacaaccctgacgaccaaccctggctcatgagaatcggaagc
aagaaagagggcaaacaatacaaagggttacgcgaaggaggcgtgtctgaaaacgcggct
tactacgtatttacgcactcccaagatggctctttcgaagctcatcccgttcacgagtgg
tacaatttcacacccagagtcacgtacaagacgttgaacgccgaagaagccgaagaaaag
tttgccgaacgcgggaaaattctcaatcatttcgctgtgatggtcaatcgcaagctccga
ccaggccaaaccgaggccgatgaggatatcgaggatgaaggaggaaagaagggcaagaaa
ggggcagccggtaagaaggacttgaagatttccgacatggacgattgggtcgattctgat
ggggctttggattccgattcggagaaagagaaggagaaaagcgacgacgaagacgggaac
aaaaagaaagccaggagcaaggactcgaagaagaagaacaagaagaaggaggaggccgac
tctgaaggcttcgaagatagcgatgatggggacggggaagggcgcgaggtggactacatg
tcagatgagagctcggcgagtgaagaggaactccaagagcaagccaatacgaaaggggta
gaccaagatgaaggcttgtccaaaatgttggattcggacgaatcggacacggatgacgag
aataaggataaagacaaagacaaggaggaaaacgaggacgaaaatggcgagaagcccaag
aaaaagaagaaaaagaaggctgccaaagacggcgacggttccaatggagagggcgattct
gatgatgagaaaaccaagaaaggcaaggggagcaaaggcaactcgcgttccaccacgcct
gcgcccgatcccgacagcaaggaatcggaaggcaaaaactctcgagccgataaacgcaaa
gctctggtggactcaatgctcgaccctcgtggagacacgtccaagaagtcccgaatggac
acttttggctcctcgcagagttccttgggcaacgtggatgcgtccatcgaagaggacgtg
cgtcgttatttggctcgcaaacagatgaccaccacggagctgttgaaaaagttcaagacc
aaaaagaccggtctgtccaaagaggaactcatgcagcaactcgtggaggccctccggaaa
atcaacccgcaaaagaagaaggtcaaaggtgtcatgtatctctttttgaaaagctag
DBGET
integrated database retrieval system
