Tigriopus californicus (tidepool copepod): 131878983
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Entry
131878983 CDS
T09700
Name
(RefSeq) dynein intermediate chain 2, ciliary-like isoform X1
KO
K10409
dynein axonemal intermediate chain 1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
131878983
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tcf03037
]
131878983
04812 Cytoskeleton proteins [BR:
tcf04812
]
131878983
Cilium and associated proteins [BR:
tcf03037
]
Motile cilia and associated proteins
Dynein arm
131878983
Cytoskeleton proteins [BR:
tcf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
131878983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_HPS5
WD40_WDHD1_1st
WDR55
Beta-prop_EIPR1
Beta-prop_IFT140_1st
EIF3I
Beta-prop_RSE1_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_LRRK2
Pep3_Vps18
Motif
Other DBs
NCBI-GeneID:
131878983
NCBI-ProteinID:
XP_059081145
LinkDB
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Position
4:complement(2861412..2870683)
Genome browser
AA seq
772 aa
AA seq
DB search
MPNLPLKSPGKTSFAKSALIRGKGSGTATPFGGVAGKKGGGGNLPAGGPGHEGEANGILE
GISSLHSWIKTQTMIRPTPKISRGKLNGTYEEDADEDVVITLTAKNPQAPKNVVRFDYTS
GEYINIKLSETMIDHLEIESTCFHRDSVEAKKQIQAGGGAMNASSFRHLAKGVVKRDRII
SLINTEGLDEDEHDEDLDEERTKRNQTAKRDQVARDAEKVKAVKPRRRDSDDEDGDGGDK
KLQNQFSFVERATQTMNNAMKSAAIQTEPPPRANFSDSVNQWIIFDAYTAYEKQKELQEE
QEKNKGKKEENVSAYSIKRILSDKKPDPNEDLNRNMLKAAKILERMVNQNTYNDIALDFK
YWEDASDEFRETEGTLLPLWKFNFEKARDMEITCLCWNPCYTDLFAASYGTYNFYEQDKP
EESYVCVFSLKNPSFPEYLCKAHCGVMCVDIHPRHPHMLAAGLADGSVAVYNLQVHSQDP
FYLSTANNGKHQDIVWQIKWAKDNLDGYLNFYSVSGDGRVTNWTIVKTALWHTDTMSIKF
SRHLENFSEELVRDNLREGGRCVNFNPTDETMFLVGTDEGVIYKCTTEYSSKYLETYPAH
NTSIYNIAWNQYVPSIFITCASEWMIKIWDHNSRKPLFMFDLNSQVGDVAWAPYSSTVFA
AVTIDGKVHVFDLHVDKYHPVCSQPIIPRKKARLNHVSFNLHHPILIVGDSKGTVHCVKL
SPNLRRQTKEVKTALANKEPKKALELEIKKLENLLAMVREPQDNKGRKEDEP
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgccgaatttaccgctgaaatcaccaggcaagacatccttcgccaaatccgctctaatt
aggggcaaaggcagtggcacagccacaccctttggaggtgtggcgggcaaaaaaggtggt
ggaggaaacttgccagccggtggtccgggacatgagggtgaagcgaatggaatattggaa
gggatctcgtcccttcactcatggatcaaaacacagaccatgatccgtcccacgcccaaa
atatcgcggggcaaattgaatggcacatacgaagaggatgctgatgaggatgtggtaatt
acgctcacagccaaaaatccgcaagccccgaaaaatgtggtcagattcgactacaccagc
ggcgagtacatcaacatcaagctctccgaaaccatgattgatcatctggagattgaaagc
acgtgctttcatcgagattccgtggaggccaagaagcaaattcaagctggaggcggagca
atgaacgcctcatcttttcgccatttggcaaagggcgtggtcaagagagatcggataatt
tccctgatcaatacagaaggtttggacgaggatgaacacgacgaggacttggacgaagaa
cggaccaagcggaatcaaactgcgaaacgagatcaggttgccagggacgctgaaaaggtc
aaagcggtgaaaccaaggagacgagattctgacgatgaggatggcgatggcggtgacaag
aagctacaaaatcagttctcgttcgtggagagagccacacaaaccatgaacaatgccatg
aagtcagcggcgatccaaactgaacctccgccaagagccaacttttcggattccgtcaat
caatggatcatttttgatgcttacacggcttatgaaaagcaaaaagaattgcaggaagaa
caggaaaagaacaaagggaagaaagaggagaatgtgagtgcctacagcatcaagaggatc
ctctcagataagaaacccgacccgaatgaggatctcaaccgtaatatgctaaaagccgct
aaaatcttagagcgaatggtcaatcagaatacctacaacgacatcgctttagattttaaa
tattgggaggatgcttctgacgaatttcgcgaaaccgaagggacacttctacccttgtgg
aagtttaatttcgaaaaggctagagatatggaaatcacttgcctttgttggaatccttgt
tacacggacctctttgcagcatcgtatggaacatataacttttacgagcaagacaaaccg
gaggagagttacgtatgcgtgttttctctgaagaacccatcttttccggaatacttgtgc
aaagcacattgtggtgtcatgtgcgtggatatccatcccaggcatccgcacatgttggct
gcgggtctggcagatggctctgtggctgtttataacttgcaggttcacagtcaggatcct
ttttacctatccactgctaataatgggaaacatcaagacatcgtatggcagatcaaatgg
gccaaggataatttggacggttacctgaacttctactcagtttccggagatggcagggtg
actaattggaccattgtcaaaactgctctctggcacactgacacaatgtccatcaaattc
tctcgacatcttgaaaacttctcggaggaactcgtcagggacaatctgagggagggtggt
cgttgcgtcaatttcaatcccacggatgagaccatgtttctagtgggaaccgatgaaggg
gtcatctacaaatgcaccacggagtacagttccaaatatttggagacctacccagctcat
aacacatcgatctacaacattgcttggaaccaatatgttccctccatctttatcacttgc
gcatctgaatggatgataaaaatttgggaccataattccaggaagcccttgtttatgttc
gacttgaattctcaagtgggagacgtggcttgggccccttattcgagtacggtattcgca
gctgtgacaattgatggtaaagtccacgtgtttgatttacatgtggacaaatatcacccg
gtgtgctcacaaccaatcataccgaggaaaaaggctcgcttaaaccacgtgtcattcaat
ctgcaccatccaatcttgattgttggcgacagcaagggaactgtccattgtgtgaagttg
tcccctaatctacgacgacagactaaagaggtgaaaaccgctctcgccaacaaagagccc
aagaaggcacttgagttggagatcaaaaagttggaaaaccttttggccatggtcagagaa
cctcaagataataaagggagaaaagaggacgaaccttaa
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