Tigriopus californicus (tidepool copepod): 131879024
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Entry
131879024 CDS
T09700
Name
(RefSeq) eukaryotic initiation factor 4A-I-like
KO
K03257
translation initiation factor 4A
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcf03019
]
131879024
03012 Translation factors [BR:
tcf03012
]
131879024
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tcf04147
]
131879024
Messenger RNA biogenesis [BR:
tcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
131879024
mRNA cycle factors
Stress granule specific factors
131879024
Translation factors [BR:
tcf03012
]
Eukaryotic type
Initiation factors
eIF-4
131879024
Exosome [BR:
tcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
131879024
Exosomal proteins of bladder cancer cells
131879024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Flavi_DEAD
UvrD-helicase
CMS1
Motif
Other DBs
NCBI-GeneID:
131879024
NCBI-ProteinID:
XP_059081199
LinkDB
All DBs
Position
4:complement(6456754..6461369)
Genome browser
AA seq
423 aa
AA seq
DB search
MSDTQERKTPTEEQWSSDRPTEDRQGGDYDGPAGMEAGGVIDSNWDEVCESFDEMNLREE
LLRGIYAYGFEKPSAIQQRAIVPCVKGLDVIAQAQSGTGKTATFSISILQQIDTSLAASQ
ALILAPTRELAQQIQKVVMALGDYMGAQCHACIGGTSVREDMRKLDVGQHIVVGTPGRVF
DMISRKNLRTEDIKMFVLDEADEMLSRGFKDQIYDVFRHLNSSIQVVLLSATMPAEVLEV
TTKFMREPIRILVKKEELTLEGIRQFYVSVDREDWKLDTLCDLYETLTITQAVIFCNTRR
KVDWLTDKMHDRDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSL
VINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTDEDRRTLHDIEKFYNTRIVEMPMNVA
DLI
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacacccaagaaagaaaaactcccaccgaggagcaatggtcgtccgaccgaccc
accgaggatcgtcaaggtggtgactatgacggacccgctggtatggaagcgggcggcgtc
atagattccaattgggacgaagtgtgcgagagcttcgatgagatgaacctccgcgaggag
ttgcttcgcggcatctacgcctatggtttcgagaagccctctgccatccagcagcgggct
attgtcccctgtgtcaagggattggacgtgattgctcaggcccaatccggaaccggcaag
actgccaccttttccatttcgatcttgcaacagatcgacacctctctggccgccagtcag
gcgctgatcctggctcctactcgggagttggctcagcaaatccaaaaagtggtcatggcc
ttgggtgactacatgggcgctcaatgccacgcctgcattggcggcacatccgttcgtgag
gatatgcgaaagctggatgtgggacagcacattgttgtcggcactcccggtcgtgtgttt
gatatgatctcgagaaagaaccttcgcactgaagacatcaagatgttcgtcctagatgag
gccgatgagatgttgtctcgtggtttcaaggatcaaatctatgacgtgtttcgtcacttg
aactcaagcatccaagtggtgttgctgtccgctacgatgcccgctgaggtgttggaggtg
accaccaagttcatgcgagagcccattcgaatccttgttaagaaagaggaactcaccctc
gagggtatccgtcaattctacgtgtctgtggaccgcgaggattggaaattggacaccttg
tgtgatctctacgaaacgctcaccatcacccaggccgtcattttctgcaacactcgcagg
aaggtggattggctcaccgacaagatgcacgatagggatttcaccgtctcggccatgcat
ggagacatggaccagaaggagcgtgatgtgatcatgcgagagttccgatccgggtcttct
cgtgtcctcatcacgacggatttgttggctcgtggtattgatgtgcagcaagtctccttg
gtcatcaattatgaccttcccacgaaccgagaaaactacattcacagaattggccgtggt
ggtcgtttcggccgtaagggagtggccatcaactttgtcaccgatgaagataggcgaacc
cttcatgatattgagaagttctacaacacccgcattgtggagatgcctatgaacgtggct
gacctgatctaa
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