Tigriopus californicus (tidepool copepod): 131879038
Help
Entry
131879038 CDS
T09700
Name
(RefSeq) transcription factor Sox-21-A-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcf03000
]
131879038
Transcription factors [BR:
tcf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
131879038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
131879038
NCBI-ProteinID:
XP_059081211
LinkDB
All DBs
Position
4:6723873..6725083
Genome browser
AA seq
231 aa
AA seq
DB search
MSQPNTSDHQQHPKTVVVGSLEGPSNERIKRPMNAFMVWSRIQRRKISLENPKLHNSEIS
KHLGFEWKFLTEDKKRPFIDEAKRLRAQHLKDHPNYKYKPRRRPKVSFHPSNVEPRISQS
QLRVLNPSTSFTARSTSISEPKLRFTMTFPNLEPKCGADTTVSSLPSYPHQTSLGITYHG
TSALMQSLGPNSGPSTTPSLPDFSYFYDRPPGDLFPSQMGFLQGQVCRGQI
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgagccaacccaacacttcagatcatcagcaacatcccaaaaccgtggttgtcggttct
ctagaaggtccttccaatgagcgcatcaaaagacccatgaatgccttcatggtttggtct
agaatccaaaggaggaaaatatctttggagaaccccaagctacacaactccgaaatctcc
aaacatctaggttttgagtggaagtttttgaccgaggacaaaaagcggccttttatagat
gaggccaaacgactgcgtgcacaacatttgaaagatcaccccaattacaaatacaagcct
cgtcgccgtcccaaggtctcttttcatccttccaatgttgagcctcgaataagtcaatcc
caattgagggtcctgaaccccagcacaagcttcacggccagatcaacgtccatttcggag
cctaaactccgtttcacgatgacctttccgaatctagaacccaagtgtggagccgataca
acggtttcatccctgcccagttacccccatcaaacatcattggggatcacatatcacggc
acctcggccttgatgcaatcgttaggcccgaattcaggcccctcaacaacaccttcgttg
ccggacttttcttatttttacgaccgacccccgggggacctttttccatcacaaatgggc
tttcttcaaggacaagtttgccgtggacagatttag
DBGET
integrated database retrieval system
