Tigriopus californicus (tidepool copepod): 131879139
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Entry
131879139 CDS
T09700
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-3-like
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04080
Neuroactive ligand-receptor interaction
tcf04082
Neuroactive ligand signaling
tcf04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
131879139
04082 Neuroactive ligand signaling
131879139
04519 Cadherin signaling
131879139
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tcf04040
]
131879139
Ion channels [BR:
tcf04040
]
Ligand-gated channels
GABA-A
131879139
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
TisB_toxin
Motif
Other DBs
NCBI-GeneID:
131879139
NCBI-ProteinID:
XP_059081357
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Position
4:5575222..5576648
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AA seq
389 aa
AA seq
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MELMARSCPNRHVLFVIKLMSLIWPTSSSCELELEEFSVPENYSANRVPSVESNTPLVTN
VSFMIKQVQAVSDFSTSFTVDLQLSIRWKDPILSTFPCNGSFDLKVLHDIWTPETYFYGL
KKAEKLTMIDSTPEAISISGEYFWWWLDLRVEMHCSMNFEHYPLDSQRCVVRLGSVRHDA
KKQIYQGSTQQLHLFFQKSLQYSIQFEDLREDEKYFSDAYNSNYSVSGFVLNLKRRRLPV
FINMYFPTSLLTMMTWISFFIPAKQVPGRISLVMTIFLMLVNIANSSGVRGPSATTFTAM
DIWLLICKLMVSTTILEYAFLLKLHWNLDGRECKEQTKAEKVNSATNMPMSRVQLDRRCQ
QIDFISFLVCVITYSLACLIYTLYFTIFS
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggaattaatggctaggagctgcccaaaccgtcacgttctattcgtcatcaaactgatg
tctttaatctggcccacatcctcttcctgtgagcttgaattagaggagtttagcgtgcct
gaaaactattcagctaatcgggtaccttcggtggaatcaaacaccccgttagtgaccaac
gttagtttcatgatcaagcaagtccaagctgtaagcgatttttctaccagtttcactgtg
gatcttcaactgagtatccgttggaaggatccgattctgtcgacctttccctgcaatggg
tcctttgatctaaaggttttgcacgatatttggactcctgagacgtatttttatggactg
aagaaagctgaaaaactgaccatgattgacagcactccggaggcgatctcgatatcggga
gaatatttctggtggtggttggatttgcgggttgaaatgcattgctccatgaactttgag
cattaccctttggatagccaacgatgcgtggttcgcttgggatctgtccgccatgatgct
aaaaagcaaatatatcaaggttccacccagcaactccatctgttcttccaaaagagcctt
caatactcaatccagttcgaagacctaagagaagatgaaaaatattttagcgacgcctac
aatagtaattattccgtgtctggatttgttttgaacctcaagcggcgtcgacttcccgta
ttcatcaatatgtacttcccaacatcgcttttgactatgatgacttggatcagttttttc
attcccgccaagcaagttccggggagaattagtttggttatgaccatattcttgatgttg
gtcaacatagcaaactcctcaggggtgagaggccccagtgccacgacttttacagccatg
gacatctggcttttgatttgcaaactgatggtgtccactaccattttggaatatgctttc
ctcctcaaacttcattggaatctagatggaagagagtgcaaggaacaaaccaaggctgaa
aaagtaaactctgcgacaaacatgccaatgtcccgagtgcaattggatcgtcgatgtcaa
caaattgatttcatcagctttttggtttgcgtcatcacgtattcccttgcttgtctaatt
tataccttatattttacgattttttcttga
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