Tigriopus californicus (tidepool copepod): 131879145
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Entry
131879145 CDS
T09700
Name
(RefSeq) sodium channel protein 1 brain-like
KO
K04833
voltage-gated sodium channel type I alpha
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tcf04040
]
131879145
Ion channels [BR:
tcf04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
131879145
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
GPHH
Na_trans_assoc
Motif
Other DBs
NCBI-GeneID:
131879145
NCBI-ProteinID:
XP_059081365
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All DBs
Position
4:5427904..5497647
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AA seq
2576 aa
AA seq
DB search
MATVPDSDINTISVIARSAASDPRPSGSGTYRLPTIKNARSRNMNGNRAPPITTDSSKKG
EKDGSTGVMVDMKACNAFASAARSARAASALAKKPRIQNEVKSFTRESLEKINLRTSNLI
RDYGFLPKRSPNLQDGAQLPAKYEPFPAELLGKPVEELDQYVYEKSFCVVSRRFQKHYVQ
RFNATRSLFLFHPWNKLRTAAIYICTNQYFDYIVMLTILVNCIFLAMTHPIDEAEYIFLV
IYTFEMAIKCVARGFILNNYTYLRNPWNWLDFTVIFSGYLTSFIEMGNLAGLRTFRVLRA
LKTVSIMPSLKTIINALLNAVKQLAEVMTLTIFCLMVFALFALQVYMGQLRNKCVQDWSG
EDAGNWTEWILDPNHWHYNSRGPELCGNSSGARNCPHGYVCLPNVGGNPNFGYTSFDNLL
WSMLTTFQLITLDYWENVYNMIVATGGPIHVIFFTIVVFFGSFYLINLMLAVVAMSYEEE
AEANSAERAKEAEEAAANATRAPLEEECTIRTNPPAQAHKIRGAPGLGVSISEDMCGNCQ
KKASLEILPQSGSFDQDHLRFGNGLSDHELGGPHGSNGASCSGGGGNLGGRDSHPASSGV
LYPSLSSRKSDKPYVVIKAKQVGNEIRSVDLEQHHGNGDPTFLKYPARERARGHPRSSYD
VKLNLQVPLDPSLPNSPCSDDPRNLLSPPMLEQSQFDQSSLSNYSSAGESIRSSINDSGV
FNDDQSMAEDKLRLQMPFNNDKGEIINCGNVKRPSKIDIPFVVSIETTSDRNCPGCRKFC
LGYSFWLRFQNTLFVIVHDMLFDATVTLCIILNTAFLAAEHHGMSEDLKHILDIGNKVFT
SFFTLEAVLKLLALSKEYFASGWNIFDLVIVIGSLIDLSVESVNGISVLRGMRLMRVLKL
AQSWTTMKVLLSIIISTLGALGNLTFLLIIVIYIFAVLGMQLFGKTYTKENFYPDPVPRW
NFTDFFHSFMMIFRILCGEWVEPLWDCMRAEAKVGVAESCLAIFLPALVMGNFMVLNLFL
ALLLNSFNCEELKSRKEEVKGESGSIVASKLSKLKRKVIRRKPKSLEVASKKFTSNGSLL
SHNGLKAAYSEPDMGTRIKAVSGLVELGHSLEGQSKSLTFEEGLKDLDEKDEEASQDGQK
SSEPEPCCPEVCSRLFAWATCLDDTWIIHSWDRIRQVIHDIVDNPFFEWTILLLIFASSL
SLCFEDINLQDNAELMFILKIVNLVFAVLFTIEMFLKWIAFGLWRYFTSMWTCLDFVIVC
VSILSLAIEGSANLTALRSLRTLRALRPLRAISRWQGMKIVVNALMYAIPSIFNVLLVCL
VFWLIFSIMGVQFFGGKFHKCVDEFEERLPITVTNDMWECWEKNYTWVNSKINFDHVGHA
YLALFQVATFEGWMEVMADAVDAREVNQQPQWEASIYNYFYFIIFIVCGSFFTLNLFIGV
IIDNFNMLKKKYEGGVLEMFLTESQKNYYTAMKKLGRKKPQKVIRRPTNEIHAIFYDISL
SRRFEIAIFVLIFLNMVSMGIEHYNQSRVITFTLEICNALFTTIFSLEAIVKIIGLRFQY
FTAGWNIFDFVLVIASVIGIVMEDMMTDFPVSPTLLRVVRVFRIGRILRLIKAAKGIRKL
LFALMVSLPALFNIGALLALITFIYAIIGMTLFGHVKHNGALNDQVNFETFGRSMSLLFR
LVTSAGWNDVLEPLLVTPPDCEPNYKGLPNGNCGHPFVAIVYFVSFIIINFMIVINMYIA
IILENFNQAHQEEEIGIVEEDLEMFYTKWSKYDPHATQFINFNQMSDFIASLDSPLGIPK
PNTLALVSFDLPIAKGDKIHCLDVLHSLTKHTLGFVDDGSEDFGKLASQMDDKFKKQFPT
RKELEIVSSTREWKKLDNAARILQRMFKEIRRARITGEKVNIHTQTRLVKKPPPQGGGEN
AARTLYQESDIDWKTHSLPSLGRLSGDNTLESSGDDYAIRRSVRRTRRNNNKKDQALRSQ
SMVVTDEDDLNDETEETHGSEEMDRFSGYSDQYQQSSSARRSIQRDRQPVPDTYQSQHWA
PHQAQPHSHGAIEPTQESLIILQSFAEEPPPELAQNPRQSRTSLEEYSEPAPPPSGDELS
THLENQRYKHRRNPSTGSYHFPPRLPHPSDDRPQARQRYSYSDYQQLDLELQHGSFGMSH
HVRHHRELPTTPLQPSALFQNMQPNSPNPGIVGPIVTAKTAGPSIVQYDPGYLCEPAHLR
SGAQDSGYHGSVREYPQTKVPYLQEQGYYGDESQKHSFLGYDEPDPVPYGEGPCRGKASI
DPHAHQLHHHPKLHKGGRPRRKDSLQMDFEEGYIDGHPHKQPYPCGASSQIYHPGQPADF
QGELIPKRGRHRKDESSGKSPKASTKELQGSPKRSPKKKKSLEKERDVGTKRKTNKVQHY
VEPEQELKYVISEAEYQKSMLLPQDGGDCGARTTQLSENLDPPRRSADRKGHAKGKGTSP
KISSEERRRHKTPPSFVDQDYLPRSQRSRHHPGASHRQESERPSRSRNHPEDPGHHGGRS
GGRHDPHRQTIRRQAQVALDMQSSDISDAFDDDGLFHFEEQQNMGYMEDKSDCKRK
NT seq
7731 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccgttccagattccgacatcaataccatcagtgtaattgctcgctctgcggct
agtgatcctcgaccgtcaggctcaggcacctatcgtttacctaccatcaaaaacgcacgt
tcccgaaacatgaacggcaatcgagccccaccaatcaccactgactcttccaaaaaaggg
gagaaggacggatccacgggagttatggtcgacatgaaggcttgcaatgcgtttgcatcg
gctgcccgtagtgcgcgagccgcctcggctttggcgaagaagcctcgaatccaaaatgag
gtgaagtcctttacccgtgaatctctcgagaagatcaatcttcggacgagcaatctcatt
cgtgactacgggtttcttcctaagagaagtcctaatctccaagatggagcacagttgccg
gctaaatatgagcctttcccagctgagcttttgggtaaaccggtggaagagctggatcag
tatgtctatgagaagagcttctgtgttgtctccaggaggtttcaaaagcactacgttcag
cgattcaatgccactcgctcactgtttttattccacccatggaacaagcttcgaactgcc
gccatctacatttgcaccaaccaatatttcgactacattgtgatgcttacaattctagta
aattgtattttcttggctatgactcaccccattgacgaagcagaatatatatttctggtc
atctacaccttcgaaatggccatcaagtgtgtggcccgaggattcatcctgaacaattac
acttatcttcgaaacccctggaactggttggacttcactgtgatcttctctggatacctc
acctctttcatcgaaatgggcaatttggccggactgagaaccttccgcgtccttcgagcc
ctcaaaacagtctctatcatgccaagtttgaagaccatcatcaatgcgctcctgaacgct
gtcaagcagctggccgaggtcatgacgttgaccatattctgtttgatggttttcgcactc
ttcgccctccaagtctacatgggtcaactccgaaacaaatgtgttcaagactggagcggg
gaagacgcaggcaattggacagaatggatcttggacccgaatcattggcattataatagc
cgaggtcctgaactctgtggtaattcaagtggggcgaggaactgtccccatggctacgtg
tgtcttccaaacgtggggggaaaccctaattttggctatacgagctttgataatctactc
tggtctatgctcacaactttccaactcatcacattggattactgggaaaatgtctataac
atgattgtggccaccggtggacccatccatgtgatcttttttaccattgttgtgttcttt
ggctctttctacctcatcaatctgatgctggctgtcgtggcaatgagctacgaagaggaa
gcagaggccaatagtgctgaacgtgccaaagaagctgaggaggctgctgccaacgccact
cgtgctccactcgaagaagaatgcacaattcggacgaatccgcctgcacaagctcacaaa
atccggggtgccccgggcttaggcgtaagcatatccgaggatatgtgcggcaactgccag
aagaaggccagtttagagatcctacctcaatcaggaagctttgaccaagaccaccttcgc
tttggtaatgggttgagcgatcatgagcttggcggcccccacggttctaatggggccagc
tgctccggtggtggagggaatttaggagggcgggacagccatccggcgagtagcggcgtc
ttgtacccatccctgagcagccggaaatctgacaagccttacgttgtgataaaggccaaa
caagtgggcaatgaaattcgatcggtggacttggaacaacaccatgggaacggagatcca
acttttctcaagtacccagcacgtgaaagggctcgaggtcatccacgatccagttacgat
gtgaaactcaatttgcaagtgcctctagacccctcattgcccaactcgccctgtagcgac
gatcccaggaatcttctctcccctccaatgctggagcagtcccaatttgatcaatcaagt
ctgtccaattattcatcagccggtgaatccatccgttcttccataaatgactctggtgtg
ttcaacgatgatcaaagtatggccgaggacaagttacgacttcagatgcctttcaacaac
gacaaaggtgaaatcatcaattgtgggaatgtcaaacgaccgagtaagattgacattcca
ttcgttgtctccatagaaaccacaagtgaccgcaattgtccgggttgtcgtaaattttgc
ctcggctacagcttttggttgcgcttccaaaacaccctgtttgtgatagtccatgacatg
ttgtttgatgccaccgtaacgctttgtatcattctgaacacggctttcttggcagccgaa
catcatggcatgagcgaggacctcaagcatattctcgatataggaaacaaggtttttacc
tccttctttaccctcgaggctgtcctgaagcttctggccctcagcaaggaatactttgcc
tccggatggaacattttcgatctagtcatcgtcataggcagtctcattgacttatctgtc
gagagtgtcaacggaatctcggtgcttcggggcatgagattgatgagggtcctcaaactg
gctcaatcttggaccaccatgaaagtgcttttaagtatcatcatatcaacacttggagca
ttgggcaaccttacctttcttctcatcatagtcatctatatatttgccgttttgggcatg
caactcttcggaaagacctacaccaaagaaaatttctatcccgatccagtcccaagatgg
aatttcacggattttttccactctttcatgatgattttccgaatactctgtggagaatgg
gtcgaacccttatgggactgtatgagggctgaagccaaagtgggcgtagccgagtcgtgc
ttggccatttttcttcctgctcttgtgatgggcaacttcatggttttgaatctattcttg
gctcttttgctcaacagcttcaactgcgaggagctcaaatcccggaaagaggaagtcaag
ggtgagagcggctccatcgtggccagcaagctcagtaagttgaaacgaaaggtcatccga
cggaagcccaaatcgctggaagtggcctccaagaagttcacctccaatgggtccctgtta
tctcacaacggcctcaaggcggcctactccgaacctgacatgggcacacggatcaaagcc
gtgtctggcctcgttgaacttggacattccctcgaaggccaaagcaaaagtctgaccttc
gaagaggggctcaaggaccttgacgaaaaggacgaggaggcctctcaggacggtcagaaa
tcctccgaacctgaaccgtgttgtcccgaagtctgttccaggctatttgcttgggccacc
tgcttggacgacacttggatcatacactcttgggatcggatccgtcaagtgattcacgac
attgtggacaatccattctttgaatggaccattctcctgctcattttcgcctcgagctta
tcgctgtgtttcgaggacatcaacttgcaagacaatgccgagctgatgtttatcctcaag
attgtgaacctcgtcttcgcagttctattcacaattgagatgtttctcaaatggatcgca
ttcggcctttggcgttatttcacgagcatgtggacctgtctcgattttgtgatagtgtgt
gtttcaatcctgagcttggccatagaaggtagtgccaacttgactgctctacgttccctc
agaactcttcgagccttgaggcctttacgcgccatatccagatggcagggaatgaagatc
gttgtgaatgcactcatgtatgccatcccgtccatcttcaacgtcttactggtttgcctc
gtgttttggttgatcttttccattatgggggttcagttcttcggcgggaagttccataaa
tgcgtggatgagtttgaggagcgcctgcccatcactgtcaccaatgacatgtgggaatgt
tgggagaagaattacacctgggtcaattccaagatcaactttgatcacgtagggcatgcc
tacttggccctcttccaagtggccacttttgaagggtggatggaggtcatggctgatgct
gtcgatgcccgggaagttaaccagcagcctcaatgggaggccagcatatacaactacttt
tacttcattatcttcatcgtgtgtggatcattcttcaccttgaacttgttcattggtgtc
atcattgacaatttcaacatgctcaagaaaaagtatgaaggtggagtgctggagatgttc
ttgaccgagtcgcagaagaattactacaccgccatgaagaaattgggcaggaagaaaccg
caaaaagtcatccgcagacccaccaatgagattcatgccatattctatgatatatcatta
tccagaaggttcgaaattgccattttcgtcctgatctttttgaacatggtcagcatgggc
atcgaacactacaaccaatctcgggtgatcacgttcaccctcgaaatctgcaacgcgctc
ttcaccacaatctttagtctggaggcaattgtgaaaatcattgggcttcggttccaatac
tttacggcgggatggaatatctttgactttgtattagtcatagccagcgtgattggcatt
gtcatggaagatatgatgacggatttccctgtatcgcccactttgttgagggtggttcga
gtcttccgaattggtcgaatccttcgactcattaaggctgcgaaaggcataagaaaacta
ttatttgccttgatggtttctctgcctgctctattcaacattggagctctcttggcactc
atcactttcatctatgccatcattggaatgactctttttggccatgtcaagcataacgga
gctctcaatgatcaagtaaacttcgagacctttggccgatccatgtccttgctattcagg
cttgtcacttcggccggatggaacgatgtcttggaaccgttgttagtgacccctccggat
tgtgagccgaattacaagggtctaccaaacggaaattgtggccatccgtttgtggccatt
gtctattttgtttcttttatcatcatcaacttcatgatcgtcatcaacatgtatatcgcc
atcatcctggagaactttaatcaagctcatcaagaagaagaaatcggcattgtcgaggaa
gatctggagatgttttacaccaaatggtccaaatacgatccgcacgccacacaattcatc
aacttcaaccaaatgtcagatttcattgcgagtctggattctcccctgggaatccccaag
cccaacacccttgctctggtcagttttgatcttcccatcgccaaaggggacaagattcat
tgcttggacgtcctccattcgttaaccaaacacacgctcgggtttgtggatgatggatca
gaggacttcggtaaattggcttcacagatggatgacaaattcaagaaacaatttcccacc
cgcaaggaattggagattgtttcttccacccgagagtggaagaaactggataacgccgct
agaatattgcaacgcatgttcaaagaaatcagacgggcccggataactggagagaaagtc
aacattcacactcaaacccgattggtgaagaaaccacctcctcaaggtgggggcgaaaat
gccgcccggaccttgtatcaagagtctgatatcgattggaaaacgcactccctcccctcg
ttgggccgactcagtggggacaacacattggagtcctccggagatgattacgccatcaga
aggagcgttcgaagaaccagacggaacaataacaagaaggaccaagctctccgatcgcaa
tccatggtggtgactgatgaggatgatctcaacgacgagaccgaagagacccatggtagc
gaggagatggatcgcttcagcgggtattcagaccaatatcagcaaagctcgtcggccagg
agatcaattcaacgggacagacagcccgtgcctgacacatatcaatcccaacattgggcc
cctcaccaagctcaaccacactctcatggagccattgaacccactcaggagtcgctcatc
atccttcaatcctttgctgaagagcctccaccggagttggctcaaaatcctcgccaatct
cgaacttcgttggaagagtattccgagccagctcccccaccttctggagacgagctctcc
actcatttggaaaatcaaagatacaaacaccgtagaaacccctcaacagggagctaccat
tttcctcctcgattaccgcatccttccgatgatagaccacaggcccgtcaaagatatagc
tattcagattatcagcaactagatctcgagctacaacatggttctttcgggatgtcccat
catgtcaggcaccatagagaattacccacgacaccgcttcaaccttcagcgttgtttcaa
aacatgcaacccaattctcccaatcccggtattgtcggaccaattgttacagctaaaacc
gccgggcctagcatagttcagtatgatcccggatatctctgtgagcccgcgcatcttcgc
tcgggcgcgcaggattcgggttatcacggtagtgtcagagaataccctcaaaccaaagta
ccttaccttcaggaacaaggctattatggcgatgaatctcaaaaacattcgtttttgggc
tatgacgaacccgatcccgtaccttatggtgaaggtccttgtcgtggaaaagcgtcgatt
gatccgcatgctcaccaacttcatcatcatccgaagctacacaaagggggtagaccaaga
cgaaaggattcacttcaaatggattttgaggagggttacattgatggccatcctcataag
caaccatatccttgtggtgcttcaagtcaaatatatcatcctggacaaccagccgatttt
caaggggagttaattcccaagcgaggacgtcaccggaaagacgagtccagcggaaaaagc
cccaaggcgtccacaaaagaactacaaggcagtcccaaaagatcccccaagaagaaaaag
tccctcgagaaggaaagggatgtggggaccaagagaaaaacaaataaagttcaacattac
gtcgagcccgagcaagagctgaagtacgtcatctctgaggctgaatatcagaagagtatg
ctgttgcctcaggatggcggggattgcggagctcgaaccactcaattgtcggaaaacttg
gaccctcctcgacgatcggctgaccgaaagggccacgccaaaggcaaagggacaagtccc
aagatatccagtgaggaaagacggcgccataaaacgcccccttcgtttgtggaccaggat
tatttgccacggtcacaacggagtcgccaccatcccggagccagtcatcgccaggagtca
gagagaccttcgagatcgcgcaaccatccagaggacccaggtcatcatggaggtcgaagt
ggaggacgtcatgatcctcatcgacagaccatccggcggcaagctcaagtggctctggat
atgcaatcgagtgacatcagtgacgcttttgatgacgatggcctgttccactttgaagag
caacaaaacatgggctacatggaagacaaatccgattgcaagcgcaaatga
DBGET
integrated database retrieval system
