Tigriopus californicus (tidepool copepod): 131879150
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Entry
131879150 CDS
T09700
Name
(RefSeq) uncharacterized protein LOC131879150 isoform X1
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tcf04040
]
131879150
Ion channels [BR:
tcf04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
131879150
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans_N
Ion_trans
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
131879150
NCBI-ProteinID:
XP_059081372
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Position
4:1130648..1164780
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AA seq
1221 aa
AA seq
DB search
MAESWAMKQGDNPAGTSLENGETTTKPGSQLEFGFDAHPHSSLRQLTLQDGPPRNLAPIS
KSAPGSPRPLLSAQVHPSSGKSSEVEGQDQIPLPKTRSSSIWTIDLPYKRTYGDMGSDES
TSLLWHQNKPTWSGDVIPEETPLTDVPGCSDQPCHPPSHGPSGSGVGQYLPGTMRLANGR
IGYQPVVRNHEDDPKSFERPLYSNTVFNAIVNQSLSNTPVRTVALDEVLGPSVAESLPKY
AYPTKDNAAFGGSQDLLSGHHHRRTQSLKGRKEDRLRRKKRTSECRISMDEGNNNSPPLI
IQDPITDSQGHHLLEDLNTTAFSYASLPLEPCYPGTTGHNGQQTTSFMEHDQPHGPSDIS
YPYNPDSSAFPPGAMPGDNSTKVHFSSEKDDISLYGTPKEEMAPPTASGCSSRAISVSSD
TKPGWVRNQLQNIFQPTDNKLAMKLFGSKKALIQERVRQKAAGHWIIHPCSSFRFYWDLC
MLLLLVANLIILPVAISFFNDDLSTRWIAFNCLSDTIFLIDIVVNFRTGIMQQDNSEQVI
IDPKLIAKHYIKTWFFLDLLSSIPLDYIFLIFNSIRGTDEYTESFQILHAGRALRILRLA
KLLSLVRLLRLSRLVRYVSQWEEVYILQTARKKTRERVDHSKIAGGDGGERGGGGSSSPK
NSWFVKFISSLGVFMRIFNLICMMLLIGHWSGCLQFLVPMLQGFPSNSWVAINELQEAYW
LEQYSWALFKAMSHMLCIGYGRFPPQSLTDMWLTMLSMISGATCYAMFLGHATNLIQSLD
SSRRQYREKVKQVEEYMAYRKLPRDMRTRITEYFEHRYQGKFFDEEEILGELSEKLKEDV
INFNCRSLVAAVPFFANADPQFVSSVVTKLKYEVFQPGDIIIKEGTIGTKMYFIQEGIVD
IVMSHGEVATSLSDGSYFGEICLLTNARRVASVRAETYCNVFSLSVNHFNAVLDMYPLMR
KTMETVAAERLNKIGKQNPNLGSSTENGDDDDNTPDMTAIVSALANQQSEDDESIISHCG
SLESLDTQYIPKDLQNLSRMFIQANLLPRPRSFSNMSHENHDHESSSHTPFSRFRASFHK
SDTRLFPPRNRSPPSSTPRAGKSGNSPPHHHHHHHRHHGHGHGHGHGYNNRRSSGNGHTL
VPGALPGFLAPPLLPILAVESSGKYTPKPETRYRSSTAPSGNLPAKDSKKGSPRSRGGPN
TSPSTAQAEQSSSSQDHTKSE
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atggccgagtcttgggcaatgaagcaaggcgataatcctgcaggcacctctcttgagaat
ggggagactaccacaaagccagggtcacaattggaatttggattcgacgcccacccacat
tcttccttacgccagcttacacttcaagatggaccgccgcgcaatttggcgccaatttca
aagagtgctccagggtcaccacggccccttttgtccgcccaagttcatccttcaagcgga
aagtcatcagaggtcgagggacaagatcaaataccgcttccgaaaacgcgaagttcttcg
atttggaccattgacctgccctacaaacgaacttatggagatatgggttctgatgaatcc
acatcgctgctttggcaccaaaataagcccacgtggagcggcgatgtcatcccggaagaa
acgcccctcaccgatgttcccggatgttcggaccagccttgccatcctccctcccacgga
ccttcaggttccggtgtcggtcaataccttccagggacaatgcgtttggccaatggacgc
ataggatatcagcctgtggttcgaaaccatgaggatgatcccaaaagttttgagagaccc
ttgtacagcaatacagtattcaatgccattgtcaaccaatctctaagcaatacccctgtc
agaactgttgccctcgacgaagtcttgggaccttcagtggccgagtccttacctaaatat
gcttacccaaccaaagacaatgcggcctttgggggcagccaggatcttctaagtggccac
caccatcggcggacacaatccttgaaaggtcgaaaggaagatcgacttcggaggaaaaag
aggacaagcgagtgtcggatcagcatggatgagggcaacaacaattccccgcctctcatc
attcaagatccaatcactgattctcaaggacatcatttgttagaagatttgaataccacc
gccttctcatacgcctccttgccactcgagccttgttatcccgggacaacgggtcataat
ggtcaacaaaccacctctttcatggaacacgaccaaccccatggcccttcagacatatcc
tatccgtacaatccagattcaagtgcatttccacccggggcaatgccgggcgataattcc
accaaggtccattttagctcggagaaggacgacatctcattgtatggcacgcccaaagag
gagatggccccgcccacggccagtggttgttcctcaagggcgatctcggtgtctagtgat
acgaagccgggctgggttcgaaatcagttgcagaacattttccaaccaacggacaataag
ttggccatgaagttgtttggctcgaagaaggccttgatccaagagcgggtccgacaaaag
gcagcgggacattggatcattcatccatgttcaagcttcagattttattgggatctgtgc
atgctcttgcttttggtggcgaacctcatcatccttccagtggccatttcgttcttcaac
gatgatctcagcacccgatggattgcctttaattgtctttcggacaccattttcctcatc
gatatcgttgttaattttcgcacgggaatcatgcaacaagacaatagtgagcaggtgatc
atcgatcccaagctaattgccaagcactacatcaagacctggttctttttggaccttttg
agctcaattcctttggactacatatttctcatctttaacagtattcgtggcactgacgag
tacaccgaaagcttccaaatccttcatgcaggaagagcccttcgaatccttcgcttagcc
aaattgttgtctctcgtcaggctcttgagattatcgcggctggtccgttacgtgagccaa
tgggaggaagtctacattttacaaacagcacgcaaaaagacccgcgaacgagttgaccac
agcaagattgcgggtggggacggtggcgagaggggaggtggtggcagctcctcacctaaa
aacagctggtttgttaagttcataagctccttgggagtgttcatgcgaatcttcaacctt
atatgtatgatgctattgatcgggcattggtcgggctgccttcagttccttgtccccatg
ctccaagggtttccctccaactcgtgggtggccatcaatgagcttcaggaagcctattgg
ctggagcaatattcttgggccttgttcaaggcaatgtcccatatgttgtgcattggttac
ggtcgttttccgcctcaaagcctgacagatatgtggttgacgatgttatctatgatcagt
ggagccacgtgctacgccatgttcctgggacatgccacaaacttgatccaaagcctggac
tcctcaaggcgacaatacagagaaaaggtgaagcaagtggaggaatacatggcctacagg
aagcttcctcgtgacatgaggacacgcatcacggagtattttgaacatcgctatcaagga
aagttcttcgacgaggaagagatcttgggcgagctctccgagaagctcaaagaagatgtg
ataaatttcaattgtcgatctctagtggcagctgttccattctttgccaacgccgaccct
caattcgtttcgtcagtcgtcaccaagctgaaatatgaggtcttccaaccaggtgatatc
atcattaaagagggcactattggcacgaagatgtactttatccaagagggaatcgtggat
attgtcatgtctcacggagaggtggcgaccagcttgagtgacggctcatatttcggggaa
atttgtttgttaacgaatgcacgcagggtggccagtgtgagagctgagacctactgtaat
gttttctcgttatcggtgaaccatttcaatgcggtgttggatatgtatccactcatgcgg
aaaactatggagactgtagcggccgagaggttgaataagattgggaagcagaatccaaat
ctcggatcgagtacagaaaatggggatgatgatgacaacacaccggacatgacagccatt
gtgtcagctttggctaatcaacaatccgaagatgacgagtcgatcatttcccattgcggc
tccctcgaatcgcttgatacccaatacatccccaaggaccttcaaaatcttagccgaatg
tttattcaagcaaaccttttgccgagaccccgatcattttccaatatgtctcatgagaat
catgatcatgagagctctagtcacaccccatttagccgctttcgtgcctccttccacaag
tcggacacccgtttgttccctccaagaaatcgctctccgccctcctctacgccacgtgcg
ggcaaatcgggcaatagcccaccgcatcatcaccaccatcaccatcgtcaccatggtcat
gggcacgggcacggacacggatacaacaatcgtcgcagctcaggcaatggacacacactt
gtccccggcgccttgccgggctttttggctccccctctacttccgatcctggccgtggag
tcctctggcaaatacacaccgaaacccgaaactcgatatcggtcatcgacggccccatcg
ggcaacttgcctgcaaaagattcaaagaaaggaagtcctcggtcccgaggaggcccaaac
acgtccccatcaacagctcaagctgaacaatcaagttcgtcccaagatcacacgaagtct
gagtga
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integrated database retrieval system
