Tigriopus californicus (tidepool copepod): 131879189
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Entry
131879189 CDS
T09700
Name
(RefSeq) ATP-dependent DNA helicase PIF1-like
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tcf03032
]
131879189
03029 Mitochondrial biogenesis [BR:
tcf03029
]
131879189
Enzymes [BR:
tcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
131879189
DNA replication proteins [BR:
tcf03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
131879189
Mitochondrial biogenesis [BR:
tcf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
131879189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
AAA_19
AAA_30
AAA_22
Viral_helicase1
UvrD_C_2
Herpes_Helicase
AAA_7
AAA_16
SH3_13
ABC_tran
Mg_chelatase
AAA
NTPase_1
CTD2
AAA_24
Motif
Other DBs
NCBI-GeneID:
131879189
NCBI-ProteinID:
XP_059081418
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All DBs
Position
1:15023646..15025604
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AA seq
618 aa
AA seq
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MNAPVIKCSLILEKTCLHSQASLGKENLKTVSLSLLRNEFQEIILKIQEKANKERKILVR
QDQLSVHRKFVREGKLTILITDQGLGLFIANAPPHELVQFVKTFAAKLAGNKLKPLISSR
QKLLSNLPSVVQDISPITVKDVQNLKKSESNRQGLLKIQMDSPVSARKTTIKRSRLTLNE
KENDEEQKPCSKSPRLELKRTTSRLELTTEQKGVLEVVKSGRNVFFTGGAGVGKSFLIKK
VIGALPPDSTYVTASTGVAAYHIGGMTLHAFAGVGSGQASFDKCLELARKRKGSNDCWRK
CKHLIIDEISMVDGRFFELLESIGRAMKGNKRPFGGIQLIVAGDFLQLPPVCKGRDVKRH
YCFQTNAWRQTMHVNIQLTTVKRQNDEKFIEILNNLRRGRCSETEASILKATAKNPIERD
GIIATKLCTHTQDVIKINNDQLAKLPGSMQVFNAVDSDPGLSTILDNQLPVSAKIELKIG
AQVMLMKNLNIQNGLVNGARGRVVAFDRTSNCPVVQFACGVSETIANEKWTAKMAGGTLL
TRKQLPLKLAWAFSIHKSQGMTLDCVQMTLSKVFECGQAYVALSRAKSLDTVQILDFSPR
CIQADSLVLKYYLRLQMS
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctccagtcattaagtgttctctgatccttgaaaagacatgtttgcatagtcaa
gcctcgttgggcaaagaaaacctgaaaacagtttccttgtcattattgaggaacgagttc
caggaaataatattgaagatccaagagaaggcgaataaggagcgaaaaattctagtcaga
caagaccaattaagcgtccatcggaagttcgtgagggaaggcaagctgacaattctaatc
actgatcaaggacttggactattcatcgccaacgctcctccgcacgagttggttcaattc
gtgaaaaccttcgctgccaaattagccggaaataaactcaaacctctcattagttccaga
caaaaactcttatcgaatttgccgtcagtcgttcaagatattagcccaatcaccgtgaaa
gatgtgcaaaacctcaagaaaagtgaaagtaatcgtcaagggctgttgaaaatccagatg
gactctcccgtgtccgctcgcaaaaccaccatcaaacgaagtcgtttgacgttgaacgag
aaagagaatgacgaagaacagaaaccgtgctccaaaagtcctcgtctggagttgaagcgg
accacatctagattggagctcacgaccgagcaaaaaggcgttctggaggttgtaaaatca
ggacggaatgttttcttcaccggtggggccggggttggcaagagcttcctgattaagaaa
gtgatcggggcccttccacccgatagtacttacgtcacagctagcacgggtgtggcggcc
taccacattggtggcatgaccttgcacgcctttgccggagttgggagtggtcaggcaagt
ttcgacaaatgtctggaattggctcgcaaacgtaaagggagcaacgattgttggcggaag
tgcaagcacctgattattgacgaaatctccatggtcgatgggcggttttttgagcttctt
gaatccattggacgagccatgaagggcaataaacggccttttggtggcattcagttgata
gtggccggggatttccttcaattgcctccggtttgtaaaggacgggacgtgaaacgacat
tattgcttccaaactaatgcgtggaggcaaaccatgcatgtgaatattcaattgaccaca
gtcaaacgacagaatgacgagaagtttatcgaaatcttaaacaacttgaggagaggccgt
tgcagtgaaactgaagcgagtatattgaaggccacggccaaaaatcccatcgaacgtgac
ggcatcatagctacgaaactgtgtacgcatacccaagatgtgatcaagatcaacaacgat
cagctggccaaacttcctggctcaatgcaagttttcaatgccgttgacagtgacccgggt
ttgtccaccattttggataatcagctccctgtttctgccaaaatagaattgaaaattggt
gcacaagtcatgctcatgaagaatcttaatatccaaaacggcctagtcaacggtgcccgc
ggccgtgttgtggcctttgaccgcacatcaaattgccctgtcgtccaatttgcttgtggg
gtcagtgagactattgctaatgagaaatggaccgccaaaatggctggaggcacgttgctc
acccgaaagcaactccccctaaaactggcatgggcgttttcgattcacaaatcccaaggg
atgactttagattgcgttcaaatgacactttccaaagtctttgaatgtggtcaagcttat
gtggccttatcgagggccaaaagcttggatacggtgcaaatactggatttctcacccaga
tgcattcaagcagattccttagtactaaagtattatcttcggttacaaatgtcatga
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