KEGG   Tigriopus californicus (tidepool copepod): 131879243
Entry
131879243         CDS       T09700                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1-like isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
tcf  Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:tcf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tcf04812]
    131879243
Cytoskeleton proteins [BR:tcf04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     131879243
SSDB
Motif
Pfam: WD40_Prp19 WD40 Katanin_con80 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_SCAP Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_IFT122_1st NBCH_WD40 WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_RIG_2nd WD40_RFWD3 eIF2A Beta-prop_WDR19_1st WDR54 Beta-prop_Vps41 Beta-prop_IP5PC_F Beta-prop_NWD2_C Ge1_WD40 Beta-prop_NOL10_N Beta-prop_WDR75_2nd Beta-prop_LRRK2 Beta-prop_WDR35_TULP_N WD40_like
Other DBs
NCBI-GeneID: 131879243
NCBI-ProteinID: XP_059081489
LinkDB
Position
4:complement(2802689..2822319)
AA seq 956 aa
MKMAPSSNLATKRAWKLQEFVAHGAQVNCLALGHKSGRVLVTGGDDKKVNLWAVGKPNCI
MSLSGHTTPVDCVRFGQTEELVCAGSQSGALKIWDLEAARLVRSLTGHKSGLTTIDFHPY
GDFLSSGSSDTNLKLWDIRRKGCIFTYKGHSQCVNSVKFSPDGQWIASGGEDGAVKIWDL
RAGKLMTEFNEHAGAVQDVEFHPHEFLLASASSDRTVNFWDLESFQLVSTSERDSGPVRC
ITFHPESECLFSGSHESFKVHLWEPHRVCDSISMGWGKIKDIAVASKQLIAASHQMSNVS
IYVVDLKRVQPMGSNIRTNSTMTNGSRNNSTPGSLATNAYKLSNGVIQQPSHVRRSFVKE
KPGLSGTRPDSQIKTSEEPNSDKSGTDPEDSDAISPADINDYRSYENIFRPRQRELSRTP
PMPDEPFQAPSGSESDVPLSHTGSLLRPNKLKLRNQKKPSPSPTRRTNQSGMHSSHIYGS
SPDVNRISNGSNNSAGNVRIRRTSNSSGNSTRPMSVYESGTLSHSPSAPQFQNGNSPTRH
QRSTSVQPRSAHELDFPGDTSPTSEHFSRASSVSRHVTRAEPSQVSRVQINGNGVDRPLE
RPTMVRPTRSSLQHDMPQQYPPNAHVYTPPSMMEQVRAANRLSQPDLTSLSYTNHRNGNI
PFQPPASGPHGQSPLVEDPLAPPEKEKFDVIPMNADKPSGLEVNEFLPQKFQDMSMTPQM
QDQSRFSAYKSYPQGGELSEQEVTSSILKGHESMMAVLTRRGRNIEILHKLWQNKDAKAA
VDQAVSLNDQAVVVDLLSVISLRPSIWNLDLCTALLPSIGDLLQSKYEMYINTGCAAMKL
ILKNFASVIKSNIDSPVGTVGVDISREERIPNWNASATLSCSGHCLVLLHISLSFPRDCT
MKETDKLNDGLYIHNKCMQCYKDLVKIRSLILKRQTMSGKLGHTYRELSILMQYLD
NT seq 2871 nt   +upstreamnt  +downstreamnt
atgaagatggctcccagttccaatttggccaccaagcgggcttggaaactccaggagttt
gtcgctcatggagctcaagtcaattgcttggcccttggccacaaatctggccgagttctc
gtcacgggtggcgatgataagaaagtcaacctgtgggcagtgggcaaacccaattgtatt
atgagcctgagtggtcacacgactcctgtggattgtgttcgatttggtcagaccgaggag
ctggtttgtgctggatctcaatcgggtgcgttaaagatttgggacttggaggcggcccgg
ttggttcgctcgttaaccggtcacaaatctggcctcaccacgatcgacttccatccgtat
ggtgatttcctctcgagtggatcctcggacaccaatctcaagttatgggatatccgtcgc
aaaggctgtatattcacgtataaaggccatagtcagtgtgtcaatagtgtcaaattcagt
cctgatggccaatggattgcctcaggtggagaagatggcgcagtgaagatctgggacctt
cgagccggaaaactcatgaccgagttcaatgaacacgctggcgctgttcaagatgtcgag
tttcatccacatgagttccttctggcctcggcctcttcagatcgaacggtgaatttctgg
gatctggaatcgtttcaactggtttccacatcggaacgagattcgggacctgtcagatgt
atcacattccatcctgagagcgagtgcctcttctcgggctcacacgaatcattcaaagtc
cacctttgggagcctcatcgcgtctgtgactccatctccatgggctggggcaagatcaag
gatatcgcagtggcctccaaacaactgattgccgcatcccaccaaatgtccaatgtctcc
atctacgtggttgatctcaaacgggttcaacccatgggctccaatattcgaactaattcg
accatgaccaatgggtccaggaacaacagcacgcctggatctctagcgacgaatgcgtac
aagctttccaatggcgttattcagcaaccttctcatgtcagacgttcgttcgttaaagaa
aagcctggccttagtggaacacgcccagattcccagataaagacgtccgaagaacccaat
tcagacaaatccgggacagatcctgaggattcggatgccatcagtccagctgatatcaat
gactacaggagttatgagaacatcttccgaccacgacaaagagagttgagtcgaaccccg
ccaatgcctgatgaaccattccaagcgccttctggatcagagtcagatgttccactgagt
catactggatcccttttgaggcctaataagttaaagctgagaaaccagaagaaaccctcg
ccaagtcccacacgaagaacgaatcaatctggaatgcactccagtcacatctacggaagc
tcgccggacgtaaatcggatttctaatggaagcaacaattctgccggcaacgtgcgaatt
cggaggacgtccaattcctccggtaactccactaggcctatgtcggtatatgagtcaggt
accctcagtcatagtccttccgcccctcaatttcaaaatgggaattctccaactcgccat
cagcggtctactagtgtccagccgcgatcagctcacgaactagattttccaggagatacc
tcaccaacgtctgagcattttagccgtgctagttcagtgagtcgacacgtaacccgggca
gagccatcccaagtttccagggttcagatcaatgggaacggcgtggatcggcccctggaa
cgtcccactatggttcgtcccactcgatcctcactacaacacgacatgcctcaacaatac
cccccgaatgctcatgtctacacgcctccttccatgatggaacaagtccgcgcagctaat
cgcctctctcagccagacttgacctctttatcctacaccaaccatcgcaatggcaacatt
ccatttcaacctcctgcctccggacctcatggtcagtcgccgctcgtggaagaccctttg
gctcctcctgagaaagagaagtttgacgtgatccctatgaacgctgacaagccctcaggc
cttgaggtgaatgaattcttgcctcaaaagttccaagacatgagtatgacccctcaaatg
caggatcaatcacgcttctcggcctacaagagctacccacaagggggagagttgtctgag
caggaagtgacctcgtcaatcttaaaaggccatgaatccatgatggctgtccttacgcga
cgaggtcgaaacattgagattctacacaaattgtggcagaacaaagatgccaaagcagca
gtcgaccaggccgtttcgctcaatgaccaggcggtggtggtggatctactctctgtcatt
tcattgaggccgtcgatttggaatctggacctttgtactgccctattgccgtctatcggc
gaccttctccaaagtaaatatgagatgtacattaataccggttgtgccgccatgaagctc
atcctgaagaattttgcgtctgtgataaaatccaacattgatagcccggttggaacggtt
ggtgtggacatttccagggaagaacgaataccaaattggaatgcttcagccacactctca
tgttctggccattgtttggtgctcctacatatttcattatccttccctcgggattgtacc
atgaaagaaaccgacaaactaaacgacggtctgtacattcacaacaagtgcatgcaatgc
tacaaggatttggtgaagattcgctcgctcatcttgaagcggcaaaccatgtccgggaaa
cttggacacacctacagagagctctcgatattgatgcaatatttggattga

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