Entry |
|
Name |
(RefSeq) transducin beta-like protein 3
|
KO |
K14555 | U3 small nucleolar RNA-associated protein 13 |
|
Organism |
tcf Tigriopus californicus (tidepool copepod)
|
Pathway |
tcf03008 | Ribosome biogenesis in eukaryotes |
|
Brite |
KEGG Orthology (KO) [BR:tcf00001]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
131879282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:tcf03009]
131879282
Ribosome biogenesis [BR:tcf03009]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
131879282
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
4:complement(11958417..11962454)
|
AA seq |
753 aa
MAPLSSVASMMGPTDATDDATDSDLWRARPWIQGHGQPVTALVGWLDGHLVVAEAGSLRC
LDLNRNLSLSSALTLAPADDPILSLTVHAPSSQIWTAHRSGLIRHSQGPQLTLIRTLKSA
HIGPIPFLAVDAAGSKLASLSVGQSASLRVWDLPAYAGQKAARAPSHHPTAMLLDPAGHL
NVGTVLGPILVYRLDELGRAPQTLERHKSGVAALAANRSCLVAAGRDQILTVWSQDSGTL
VHLIPVFEDIQTLAFSTAGRLTTGGSRGQLRGWDLSSGQEMTTITDLPTLKGRDIKALNF
SAQDELRVWQEDLVFSPDRVQCLFQEPLTDLCLITEGREVVLSTMENALKIMSVESLTVK
VFDTPHQEGVVALAGNASGGRPTFASLGKRREIFVWQRDDQTIEVLAQCVNAAAITQTFL
LDRLLFTGDVDGILKTWALEPDQTEAKTIATTLSHGKEVKAIDVDSNRGLILTASLDKTA
KIWRAEDMQRVAALSGHRRGVIAAKFSHCEPQIISSSLDGAVKIWNIGPYDCARTLEGLL
SPACDLLIHSPKTLISLSLDGAFTIWKTNENAPKLAAYNHHEAQAWKMVQIGDQIISCGT
NNQFLIWDDNTQNIKLKKEQEQTTQIKLMQSLDNALKQGKLDKAVLACLRLKQTRKLHEI
LSNCPNQVRTNLIQRLPSKYLQNFLKFSIHLNQNTRTFLLGQEIFSILIDRGHDLSLLES
AQIYQFLSFSQKHYERVSKELAKVSIVDLLLKI |
NT seq |
2262 nt +upstreamnt +downstreamnt
atggcgcctctgtcttccgtggcgtctatgatggggcccacggatgccacggatgatgcc
acggactcggacttatggcgggctcgcccttggattcaagggcacggccaacctgtgacg
gccttagtgggctggttggacgggcatttagtggtggcggaagcgggcagtctccgctgt
ttggatctgaaccgcaatctgagcctgagttcggccttgaccttggcccccgccgatgac
cccattctcagtctgaccgtgcacgccccctccagtcaaatctggaccgctcatcgttcg
ggtctgattcgtcacagtcaaggcccccaactgaccttaatccgcaccctcaaatccgcc
cacatcgggcccatcccctttctagccgtggatgcggccggctcaaagctggcttcgctc
tccgtgggtcaatcagcttcgcttcgagtatgggatttgcccgcctacgcgggtcaaaaa
gcggctcgcgcaccctcccatcatcccacagccatgctgctggatcccgccggtcatttg
aacgtgggcacggtgctgggtcctattctcgtgtatcgtttggatgagttgggtcgagcc
cctcaaaccttggaacgacataagtcgggcgtggccgcattagcggctaatcgctcgtgc
ttggtggcggcgggtcgagaccagattttgacagtttggagtcaggatagtgggactttg
gtccatctgattccggtctttgaagacatccaaaccttggccttcagtacggcgggtcga
ttaaccacgggcggttcgcgcgggcaattgcggggctgggatttaagttcaggccaagag
atgacgaccatcacggatttacccaccttgaaaggtcgcgatattaaagccttgaatttc
tccgcccaagatgaattacgggtttggcaagaggatctggtgttcagtcccgatcgcgtg
caatgcttgttccaagaacctctcacggatttgtgcttgatcaccgaaggccgggaagtg
gtcttgtccacaatggaaaacgctctcaagatcatgtcggtcgagtctctgaccgtcaaa
gtgtttgacacgccccatcaagagggcgtggtggccttagccggcaacgcctccggcggt
cgtcccacttttgcctccttggggaaacgacgcgagatcttcgtgtggcaacgtgatgat
caaaccattgaagtcttggcccaatgcgtgaatgcagctgccattacgcagaccttcctc
ctcgaccgtctattgttcacgggtgacgtggatgggatattgaagacctgggctttagaa
cccgatcaaaccgaggccaagaccatagccaccactttgtcccatgggaaggaggtcaaa
gccatcgatgtcgactctaaccgagggttgatcttgaccgcttccttggacaagacggcc
aagatttggcgcgccgaggatatgcaacgcgtggccgcactatccggacatcgtcgaggc
gtgattgcggccaagttctctcactgtgaaccccagatcatctcctccagtttggacggg
gcggtcaagatctggaatattggcccctatgattgtgctcgaaccttggaaggattgctt
tcacccgcgtgtgatcttttgatccattcgcccaagacgttgatttcattgtctctagat
ggagccttcaccatatggaagaccaacgaaaatgcacccaagttggctgcctacaaccat
catgaagctcaagcgtggaagatggtccaaatcggggaccaaatcatctcttgtggaacc
aacaatcagttcctcatatgggacgataatacccagaacatcaaattgaagaaggagcag
gagcaaaccactcagatcaagctaatgcagagcttagacaatgctctcaagcaagggaag
ttggataaggcggttttggcctgtttgagactgaagcagacccggaaactccacgagatc
ctgtccaattgcccgaatcaggtgcgaaccaatctgatccaacggctgccgagtaaatat
ttgcagaatttcttgaaattcagtattcacctcaatcagaacactcgcacgttcctcttg
ggacaagagatcttctccattctaatcgatcgtggtcatgacttgagtctcttagaatcc
gctcaaatctaccaatttctatctttttcacagaaacattatgagcgagtctccaaagaa
ctagccaaagtgagcattgttgacctattactaaagatttga |