Tigriopus californicus (tidepool copepod): 131879297
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Entry
131879297 CDS
T09700
Name
(RefSeq) protein argonaute-2-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcf03019
]
131879297
03036 Chromosome and associated proteins [BR:
tcf03036
]
131879297
Messenger RNA biogenesis [BR:
tcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
131879297
Chromosome and associated proteins [BR:
tcf03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
131879297
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
131879297
microRNA pathway
RISC loading complex
131879297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL2
ArgoL1
Motif
Other DBs
NCBI-GeneID:
131879297
NCBI-ProteinID:
XP_059081556
LinkDB
All DBs
Position
4:1274600..1277958
Genome browser
AA seq
947 aa
AA seq
DB search
MGGDRKRNNRNKGPPSTTDPAKGGPPPPSRPPRTPTVRPEPVAQQAMADLSLAETRPPTA
PPSQAPIQIQMNPSTASGRDNTAWRVPHYTSLEEKRKHLGTLGKKVRVRVNHFEMRINLK
HVHHYDVTITSEVWKGQEARKGDRDLCFRALDAFKKKYGQMFPKPFGVAYDGFKQAYSTH
VLPFGPSKIFEGLVTVPRVADLPDTIELKIRLKQLEKVDISGVLQDYIRHGTTLDRPQDA
INVVNIILSHLPQLTKMTVGRSILNEESPGRVAEIGGGKVLWTGVFPTFRPAWKFFLNVD
MVNKPGYEQTDTLEFILKSLNGMRKYQKRNMRQPRDLEDFKDKYMKMDAESEIKNLKVRF
HRPDKAKRDYKVNKFGPAANKPNVIDKDGKKMSIEFFFATEYKWKLNYPGLPTLHVGNPN
GSIYLPMELTEIKKQVCPMAKKLSDVETASMIRHTAVAPDIRQKKINESLTKLSNHFSQD
PYAKAFEVEVSKQMSVIPARILDPPGLLYKSASGDMTVKPALGKWDGKYNFLTSVSLTNW
GVLNMNPRLTRQALSQFVEVLYSEGQKRGLNIDYPEYRNFASNDRFPTPEKMESEFKALV
DTVEKAKGKKPELIMVIISARGTNEYSIIKHYGDMVLNIPTQFVLTKNVEQAKPTTLHNI
CLKINSKLGGTNLSLDKKAIPPWMNKPCMIMGGDVTHPSPDKMNDTPSIAAIVGSQDPKA
AIYNLELSLQRRGQVVEVIEETERMVKSLLLKFFNSSGKRYKPFTIVYYRDGVSEGQFDD
VLNKELSAIRRACTSLEADYKPHIVFIVAQKRHKTRMFPENPKDTLLRSKNVMPGTVVDQ
EITHPTEHNFFLASHEGIQGTTKPTSYHKLWDDLNMSSDSLQQLTFYLCHLYSRCERSVS
YPAPTYYAHLAAERAKCYYNALIDKGQNADKEALRKLTETQLKNNFI
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgggaggcgaccgaaagcgtaacaaccggaacaagggcccgccctcgactaccgacccg
gccaagggcggcccgcccccaccttcgcgcccaccccgtactcccactgtccgacccgaa
cccgtcgcccagcaggctatggcagatttatccttggccgagacccgcccacccacagcc
cccccgtcccaagcgccaattcaaatccagatgaatccgagcacggcttcaggtcgggac
aatacggcctggcgcgtgccgcattacactagcttagaggagaagagaaagcatctgggc
acactggggaagaaagtgcgggtgcgggtcaaccattttgagatgagaatcaacttgaaa
cacgtgcaccattacgacgtgaccatcacgagcgaggtgtggaaggggcaggaagcacgc
aaaggcgaccgagacttgtgcttccgcgctttggatgccttcaaaaagaaatacggccaa
atgtttcccaagccgtttggcgtggcttacgatgggttcaagcaagcctacagcacccac
gtgttgccctttggcccgtccaaaatctttgagggcttggtcaccgtgccacgggtggct
gatttaccggacacgatcgagctcaagatcagacttaagcaattggagaaggtggacatt
agtggcgtgctccaagattacatccgccatggcacgacgttggaccgccctcaagatgcc
atcaatgtggtcaatatcattttgagccacctaccccaactcaccaagatgaccgtgggg
cgaagcatcctcaatgaggaaagtcccggtcgagtggccgagattggcgggggcaaggtg
ctctggacgggcgtgtttcccacctttcgaccggcttggaagttcttcctgaatgtggac
atggtgaacaagccgggctacgaacagaccgacaccttagaattcattctgaagtccctg
aatggtatgcgaaaataccaaaagaggaacatgcgacaaccccgagacttggaggacttc
aaggacaagtacatgaaaatggatgccgaatccgagattaagaatttgaaagtgcgcttt
caccggcctgacaaggccaagcgtgattacaaagtcaacaagtttggccctgccgccaac
aaaccgaacgtgattgacaaggacggcaaaaagatgtccattgagttcttttttgccacc
gagtataagtggaagctcaactaccccggcttgcccactttgcacgtgggcaatcctaat
gggtccatttaccttcccatggaactcactgaaatcaagaagcaagtgtgccccatggcc
aagaaactgagcgacgtggaaacggcctccatgattcgtcacaccgcagtcgctccggat
atccgacaaaagaagattaacgagtccttgaccaaactgagcaaccatttctcccaggac
ccttatgctaaagcgtttgaggtagaggtctccaaacagatgtctgtgattccagctaga
attcttgaccctccgggattgctgtacaagtctgcatcgggagacatgacagtcaaacct
gcattgggaaaatgggatggcaagtataacttccttactagcgtttctctcaccaattgg
ggtgttctcaatatgaacccaaggttgactagacaggccttgtcgcaatttgtggaagtt
ctttattctgagggccaaaaacgagggctaaatattgactatcccgagtatcgcaacttt
gccagtaacgatcgattccccacaccggaaaaaatggagagcgaatttaaggctctggtc
gataccgtggaaaaggcgaaagggaagaagcctgagctaatcatggtgataatttctgcc
cgaggaaccaatgagtatagcatcatcaaacattacggggatatggtactcaatattccg
acccagtttgtgctgacgaagaatgtcgaacaagccaaacctaccactctgcacaacatc
tgcttgaaaataaactccaaattaggcggcaccaatttgtctctggacaaaaaggcgatc
ccaccttggatgaacaagccatgcatgatcatgggaggtgatgtgactcatccctcacca
gataagatgaatgacacgccttcgattgccgccattgtgggctctcaagacccgaaagca
gcaatttacaacctggagcttagtcttcaacgccgtggtcaggtggtggaagtcattgaa
gaaacagaaagaatggtcaagagtctcttgcttaagttttttaactcttctggaaagagg
tacaagccttttacgattgtttactaccgtgacggagtgtctgaagggcagtttgatgat
gtcttgaataaggagctgtccgccattcgacgagcttgcacctctctcgaggctgactac
aaacctcatattgtcttcattgtcgcccagaagcgccacaagacacgaatgtttcccgaa
aaccccaaggacactttgctaagaagcaagaatgtaatgcccggcactgttgtggaccaa
gaaatcactcacccaacggagcacaactttttcctggcctctcatgaaggcattcagggg
accaccaagcccactagctaccacaagttatgggatgatttgaacatgagctcggatagc
ctccaacagttgaccttttatctatgccatctctactcgagatgcgagagaagcgtgagc
tatccagccccaacttactacgcccatttggcggccgagagagccaagtgctattacaac
gcactcattgacaaaggccagaacgctgataaagaggccttgagaaaactcaccgaaacc
caattgaagaacaatttcatttaa
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