Tigriopus californicus (tidepool copepod): 131879349
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Entry
131879349 CDS
T09700
Name
(RefSeq) acetylcholine receptor subunit beta-like 2 isoform X1
KO
K04806
nicotinic acetylcholine receptor alpha-4
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04080
Neuroactive ligand-receptor interaction
tcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
131879349
04082 Neuroactive ligand signaling
131879349
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tcf04040
]
131879349
Ion channels [BR:
tcf04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
131879349
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF1765
Motif
Other DBs
NCBI-GeneID:
131879349
NCBI-ProteinID:
XP_059081624
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All DBs
Position
4:complement(9146159..9167742)
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AA seq
643 aa
AA seq
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MNVEILQCTSIGHNCIASSSLTKVTSPEPKVEANPHAKRLYDDLLANYNRLILPVANNSE
KLTVKLGLKLSQLIDVDLKNQIMTTNVWIEQKWFDYKLKWKPEDYGGVDTLYVPSQHIWL
PDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFG
SWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEE
LNPALDENGNALESDAEDDLMEGESKSKLLTDITFYMTLRRKTLFYTVNLIIPCVGISFL
TVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLS
ITVTVGVLNVHFRSPSTHRMSPWVRKVFIQIMPKILLMERPKYIPRYSAEPDNKLSVLEE
SCGSTTNTHRSTVSRRHSNKPNGHAGGLDLCKFEEHSAGCDDLKDDCASHCHHHTLTRST
LSRDDIPSSNGIQLQQQSPFHSSNVTTLTTHHVHHHHHHHHHHHHSHYSPTSPPGGHSPV
KHDDDDMSSQKSSEISDADGRKPTSQVAAALKGVEFIAQHIKKADKDREVIEDWKFIAMV
LDRLFLWLFTLACVAGTGGIILRAPSLYDMRTAIDTEQSTISK
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtggagattctacaatgcacatcaatcggtcataattgtattgcaagttcaagt
ttgaccaaagtcacgtcaccggaaccaaaagttgaggccaatccacatgccaagcggctc
tatgacgatctattggccaactataatcgcttaatcttgcctgttgcgaataactcggaa
aagctaaccgtgaaactgggactcaaactgtcccaattgatcgacgtggacctgaagaac
cagatcatgacaaccaatgtctggattgagcaaaaatggtttgattacaaattgaaatgg
aagcctgaagattacggcggagtggacactttgtacgttccttctcaacatatttggcta
ccagatattgtcttgttcaacaacgctgacggaaagtatgaggtgactttgatgaccaaa
gccagattaaaatacacgggcgagttgatttggaagccgccagccatttacaagtcctcg
tgcaaaatcaacgtggaatggtttccttttgatgagcaaacgtgtgatatgaaattcggc
agctggacctacgatgcctttcagctggatctcaaacatatggatcagttgagaggttcc
aacatcgtcaagatgggcatcgatctcaccgagttctacgtctccgtggaatgggacatt
ttggctgttccagccactcgaaatgaggaatactacacccctcaaagatatcaagaagag
ctcaatcctgctttggatgaaaacgggaatgcgttggaatcagatgctgaggatgatcta
atggagggcgagagcaagtccaaacttctcactgatatcactttttacatgaccttgagg
cggaagaccttgttctacacggtcaatctaatcattccatgtgtggggatctcattcttg
acagtgttggtcttctatctaccatctgactccggagaaaaagttacgctctgtatttcc
atattgctttcgctcactgtctttttcttgcttctggccgagattattcctccgacgtct
ctggctgtcccacttttgggcaaataccttctattcaccatgatcctagttacgttatcc
atcacggtgaccgtgggtgtgctcaatgttcacttccgatccccttccacgcaccgcatg
tcgccttgggtgaggaaagtgtttatacaaataatgcccaagatcttgcttatggagcgg
cccaaatacattccccgctattcggcagaaccggacaacaaattgagtgttttggaagag
agctgtggatcgaccacaaatacgcatcgttcaacggtcagccgacgacattccaacaaa
cccaatggccatgctggcggattggatttgtgtaaatttgaagagcattccgcaggttgc
gacgatttgaaggatgattgcgcctcgcattgccatcatcacacattgaccagaagcacg
ttgagtcgggatgacatcccctccagtaatgggatccaactccaacagcaatcgcctttc
catagctccaatgttaccaccctcaccactcaccatgtgcatcatcaccatcaccatcat
catcaccatcatcattcgcattattcacccacctcacctcccggaggacactcccccgtc
aagcacgacgacgacgacatgtcctctcaaaaatcatcggaaatttccgatgcggatggg
cggaaacctacgagccaagtagcggctgctttgaaaggggtggaattcattgctcagcat
attaagaaagcggataaggatcgcgaggtgattgaggactggaaatttatcgccatggtt
ttggaccgcctcttcctctggcttttcaccctggcctgcgtggctgggacgggtgggatc
atcctcagggctccatccctgtatgatatgagaacggccattgacactgagcaatccacc
atttcaaagtaa
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