Tigriopus californicus (tidepool copepod): 131879395
Help
Entry
131879395 CDS
T09700
Name
(RefSeq) gonadotropin-releasing hormone receptor-like
KO
K04280
gonadotropin-releasing hormone receptor
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04080
Neuroactive ligand-receptor interaction
tcf04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
131879395
04081 Hormone signaling
131879395
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
tcf04030
]
131879395
G protein-coupled receptors [BR:
tcf04030
]
Rhodopsin family
Peptide
Gonadotropin-releasing hormone (GnRH)
131879395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
Mucin
New_glue
DUF1129
Motif
Other DBs
NCBI-GeneID:
131879395
NCBI-ProteinID:
XP_059081685
LinkDB
All DBs
Position
4:3111387..3144362
Genome browser
AA seq
575 aa
AA seq
DB search
MEGDEGTSSVSIFEEENSTNISVESELLSDNQHAKQVLIWPMENCTLEFGNSSVAAEYNI
TCLNHAPVLTSTAEMRVWILAFMCIFSIFGNVLTIVAIFRDKHRTSLCTLILHLSIADCL
VGVFCLGGEAIWTYTVSWNYGNILCKLLKFFQMLGLYVSTFMVVVVGVDRWQAITHPLQR
SQAGKRRFHLYIASAWSLSIFLSLPQLLIFRVSKGPFIEEFYQCVTYGFYTARWQEQLYS
IFNLVCNFIIPLVILILTCSSTLVRLKDNERGFHPPSATPARSKASSNNTTTTSSAATTG
TTTTSSYLSQAEQTRQKKMRRATRRSLHMSLYIVGAFLVCWIPYYVVSMIIIFSPNPEKV
PPMLLDGIFCFGMFNSLLNPIIYGAFHLWKPPTSQSNGITELKSVRRKFSSKSSFLCQST
STPTGGMMPGRSSMLLRTPASSSSPAQPLGKNSLGLRKPPVQRCHTTESSSVLLNHNSRS
DTPKSSPNPSHPLGRGTFMLSRCATFDVPTSKVDRQKVSMKRRQIKEINKGLEDNRTHRG
NGSRHLENGSHEYTYDYTQEILGEKDEILNCSKLD
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgacgaaggcaccagctcagtatcaattttcgaagaagaaaactccacgaac
atttcggtcgagtccgagctcttgagtgacaaccaacatgccaagcaagtgctgatttgg
cccatggagaactgcaccctggagtttggcaacagttccgtggctgcggagtataacatt
acatgtctcaatcatgctcccgtcctcacgagcacggctgaaatgcgagtgtggattttg
gcatttatgtgcattttctccattttcgggaatgttctcactattgtggccatcttcaga
gacaaacaccgcacctcattgtgtaccttgatacttcatttgagtattgccgattgtctg
gtgggcgtgttttgtcttggcggggaggccatttggacatacacagtatcttggaactat
ggcaatatcctgtgtaaactactcaagttctttcagatgttgggcttgtacgtttcgacc
ttcatggttgtcgtggttggtgtggatcgatggcaagccataactcatcccttacaaaga
tctcaagccgggaagcgaagatttcatctctacattgcttcagcttggtcattgagcatc
tttctcagcttgcctcagctgctgatcttcagagtctcgaaagggccattcatcgaggag
ttctatcagtgtgtcacctatggattttacactgcccgatggcaagagcagctgtattcc
atcttcaatctcgtctgcaactttatcatccctctggtcattctcatcttgacgtgttca
agtactctagttcgcctgaaagacaacgagcgaggtttccacccaccgagtgcaacgccc
gcgaggtcgaaggcttcaagcaacaacacaacaacaacatcttctgcagctacaactggc
acaaccactacgtcgtcatacctcagccaagcagaacaaactcgacagaaaaagatgagg
agagccacgaggagatcgcttcatatgtccctatatatcgtgggagcattcctggtgtgc
tggattccctactatgtcgtgtcgatgatcatcattttctctcccaatcctgagaaagtt
ccgccaatgcttttggatggtatcttctgtttcggcatgtttaacagtctcctcaatcca
atcatttatggggcgtttcatctgtggaaacctccgacatctcaatccaatggaattacg
gaactcaagtcagtccgcaggaagttctcgtccaagtccagttttctgtgccaatccacc
agcacgcccacggggggaatgatgcctggaagatcgtccatgttgttacgcacacctgcg
tcatcttcaagtccggcgcaacctctcggaaagaattcgttgggcttgcggaaacctccc
gttcaacgctgtcacaccactgagagtagctcggtccttctcaatcacaatagccggtcg
gacacccccaaaagcagccctaatcccagccatcccttgggacgaggaacttttatgctc
tcccgttgtgcgacttttgatgttcccacgtcgaaagtggatcgacagaaggtatcaatg
aagcgccgacaaatcaaggagattaataagggactcgaagataataggactcatcgtgga
aatggatcccggcatcttgaaaatggttcccacgaatatacctatgattacacgcaagag
atcctgggggagaaggatgagattctgaattgttcaaaactagactag
DBGET
integrated database retrieval system
