Tigriopus californicus (tidepool copepod): 131879519
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Entry
131879519 CDS
T09700
Name
(RefSeq) uncharacterized protein LOC131879519
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcf03009
]
131879519
Enzymes [BR:
tcf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
131879519
Ribosome biogenesis [BR:
tcf03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
131879519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Methyltransf_31
PCMT
Motif
Other DBs
NCBI-GeneID:
131879519
NCBI-ProteinID:
XP_059081852
LinkDB
All DBs
Position
4:12074520..12077517
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AA seq
886 aa
AA seq
DB search
MGRKGNFQERVKSGPGRKTKKQADPTFAPEILEAKNAPTQTLNLSRRQRTRVKKREELKS
QLKTRGAIPTTAKGKKRAVKIPQSDDDSDDENLDNEDEEMEDGGNLIGYSDENQKWLKPV
AETLKRKFGDYHSDEEEDGEDEELEDEEDDDLMPDSFANSDEDDDDGDGDENEEGDEEGD
EEGDEEEGGSDEDEAMLPIEREAKKMEKKQKKLQKIAQMDMDEAMLSNQPHEAITLPTVL
ELAEEAAKPPDLHILQTRMKDIINVLQNFSKLREEGRSREEYLECLKRDLCQYYNYNEFM
MEKFMQIFPVSEIMEVLEANEVQRPVTIRTNSLKTRRRDLAQALINRGVNLDPVGKWSKV
GLVVYSSQVPLGATPEYLAGHYILQGASSLLPVMALAPQESERILDMASAPGGKTTHIAA
LMKNTGLLVANDANKERTKAVVGNVHRLGITNTVICSQDGREIPKMMKGFDRVLLDAPCS
GSGVISKDPDAKAKKDQRDIKVVANLQKELILAAIDALDAKSKTGGYLVYSTCSILPEEN
ENIVNYALGKRHVKLVPAGVDFGVEGFTKYREFRYHPSLKLTRRFYPHTHNMDGFFVAKF
KKLSNAIPQTHNNKADESEAEENQDDEVPDKQQLKKKERIERKMKKKQAKLDLESSKDLV
KPQKKKRRFEEPKPEATNNEELPPSNDQDSEPVKEMPEEKPDQTTPAHSPAVTRSGRTPK
PALMTKGQTLRAAKTPILKTRKGKKNENDSPPKDQGQSKASPKADQAPKSGKGRVSEVKE
TGSPVISAQVKKGQTPKAGKMTKGSVQDRTPKAKVGQSPKMNSVPTPKVGKGKEGASPNE
KSPQTPKGRKGGQSPKVIATPKIKKTPLKARSAQKKSPKSGKKGKK
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgggccgaaaaggaaactttcaagagcgtgtcaaatccggaccgggtcggaagaccaag
aaacaagcagatcccacgttcgcccccgaaatcttggaggccaaaaatgccccaacccaa
acgctcaatttgagtcggcgacaacgaacccgagtcaagaaacgcgaagagttaaagagc
cagctcaagacgcgtggggccatacccaccacggccaagggcaagaaaagggcggtcaag
atcccgcaatcggatgacgattccgatgatgagaacctggataatgaggacgaggaaatg
gaggatgggggaaatttgataggttattcggatgagaaccagaaatggctcaaaccggtg
gctgagacgctgaagcgcaaattcggtgactatcattcagatgaagaggaagatggcgag
gacgaagaactcgaggacgaagaagacgacgatttaatgccagattcttttgcaaacagc
gacgaggatgacgatgacggcgacggcgacgagaatgaagagggagacgaagagggagac
gaagagggagacgaggaagaagggggtagcgatgaggatgaggccatgttgcccatcgaa
agagaggccaagaagatggaaaagaagcaaaagaagttgcaaaagatcgcccagatggac
atggatgaagccatgttatccaatcagcctcatgaagccatcacgttgcctactgtctta
gaactagccgaagaagccgccaagccacctgatctacacatccttcaaactcgaatgaag
gacatcatcaacgttctgcagaacttttccaaactccgtgaagagggccgatctcgggaa
gagtatctcgagtgtctcaagcgcgatttgtgtcaatactacaactacaacgagttcatg
atggaaaagttcatgcaaatcttcccggtcagcgaaattatggaggtattggaagccaac
gaagtccaacgtcccgtcaccattcgtaccaattcgctgaaaactcgacgacgtgatcta
gcccaagctctcattaatcgtggtgtcaacttggatcccgtgggaaaatggtcgaaagtg
gggctagtggtttacagttcccaagttcccttgggagccactccggagtacttggctggt
cattacattcttcaaggagcttccagtttgttgcccgttatggccttagcaccgcaagaa
agcgagcgaatcttagacatggcctctgcccccgggggcaagaccacgcatattgcggct
ttgatgaagaacacgggtctcctggtagccaacgatgccaacaaagagcgcaccaaggct
gtggtgggcaatgtccatcgtctgggcatcaccaataccgtgatttgttcccaagatggt
cgcgaaatccccaagatgatgaaaggcttcgatcgcgttttattggacgcaccctgtagt
ggcagcggtgtgatctccaaggatccagacgccaaggccaagaaagatcaacgtgatatc
aaagtggtggccaatctgcagaaggagctcatcttggcagcaattgatgcattggatgcc
aaatccaaaaccggagggtatttagtgtattccacgtgttccattctgcccgaggagaat
gaaaacattgtgaattatgctttgggcaaacgacacgtcaagttggtccctgccggggtg
gattttggagtggaaggattcaccaagtaccgcgagtttcggtatcatcctagtttgaaa
ctgacccgacgcttttacccgcatacccacaatatggacggattcttcgtggcgaagttc
aagaagctctccaatgccattccccagacccataacaacaaggcggacgagtccgaggca
gaagaaaaccaagatgacgaggtccctgacaagcaacaactgaaaaagaaagagcgcata
gagaggaaaatgaagaagaaacaagccaagctcgatttggagtcctccaaggatctggtt
aaaccccagaagaagaaacgtcgatttgaagagccaaaaccagaggcaaccaacaatgag
gaattaccccctagcaacgatcaagattcagagcccgtcaaggaaatgcccgaggaaaag
ccagatcagaccacgcccgctcattcgcccgctgtcacgagatctggacggactcccaaa
cctgcacttatgaccaaaggccaaactctcagggcagccaaaacgccaattctcaagacg
cgcaaaggaaagaaaaatgaaaatgattcgccccctaaggaccaaggacagtcaaaggca
agtcccaaggctgatcaggcgccaaaaagtgggaaaggccgtgtatcagaggtgaaagag
accggaagtcccgttataagcgcacaggtcaagaaaggccaaactcccaaggccggcaag
atgacgaaaggatcggttcaagatcgtacccccaaggccaaagttggtcaatctcccaag
atgaatagtgttccaactccaaaggttggaaaaggcaaagaaggtgcgagtcccaacgag
aagtcccctcaaactcccaagggtcgtaagggtggccagagcccgaaagtgattgctacg
cccaagatcaagaagacccccttgaaagccagatccgcgcagaagaaaagtcctaaatcc
ggcaaaaagggcaagaaatga
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