Tigriopus californicus (tidepool copepod): 131879525
Help
Entry
131879525 CDS
T09700
Name
(RefSeq) glutamate decarboxylase-like isoform X1
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00250
Alanine, aspartate and glutamate metabolism
tcf00410
beta-Alanine metabolism
tcf00430
Taurine and hypotaurine metabolism
tcf00650
Butanoate metabolism
tcf01100
Metabolic pathways
Module
tcf_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
131879525
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
131879525
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
131879525
00430 Taurine and hypotaurine metabolism
131879525
Enzymes [BR:
tcf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
131879525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
OKR_DC_1
Beta_elim_lyase
Aminotran_5
SepSecS
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
131879525
NCBI-ProteinID:
XP_059081861
LinkDB
All DBs
Position
1:complement(6050293..6063425)
Genome browser
AA seq
531 aa
AA seq
DB search
MANVGDLFYDDLYPVNQDAETADPNTRAFLLEVVKILLDFISKTNDRNEKVLEFHHPIEM
KKKLDLALKEDPEPVSQLLEDCKQALENQVKTGHPRFINQLSNGLDIVSMAGEWLTATAN
TNMFTYEIAPVFILMEHECLGKMRDIIGFQKGDSILAPGGSINNMYALMIARHKLYPQHK
KHGMRAIKGQLIMYTSRHHHYSVSGGAAAIGLGTENCVQVPCDDKGRMIPVELERLITRH
KSEGHLPFFVNCTTGTTVYGAFDPINSIADICEKHHIWLHIDAAWGGGLLMSRKYRESKF
KGIERADSVTWNPHKLMGTLLQCSTLHVRESGLLISCNQMSADYLFQTDKVYDVCYDTGD
KVIQCGRHNDIFKFWLQWRSRGMSGFERQIERLMELTAYQVRRMKEEGEKFYLLNDEPEC
TNVIFWYVPERLRPRQCPQYETRDWQLELGTVRTKEYFMMDEKEQKRMLGVSFQVTAKLK
GKMMSEGSLMVSYQPLGMLPNFFRSIISNQAVGEVDIDFMLEEMERLGKDL
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgttggtgatctcttctacgatgacctttatcctgtcaatcaagatgcggag
acagctgatcccaacaccagggcttttctcctcgaggtggtcaagatccttctggacttc
atatccaagaccaatgatcgaaacgagaaggttctcgagttccaccatcccatagagatg
aagaaaaagctagatttggctctcaaagaggatccagagcccgtctctcagctcttggaa
gactgcaagcaagcattggaaaaccaagtcaagacaggacatccccgattcatcaaccaa
ttgtccaatggcctggatattgtctccatggccggcgaatggctcactgccacggccaac
accaacatgtttacctatgagatcgctcccgtgttcatcctaatggagcacgagtgcctt
ggcaagatgagggacattatcgggttccagaaaggcgattccatcctcgccccgggcggc
tccatcaacaacatgtatgctctgatgattgcccgccataagctctatccccagcataag
aagcatggcatgcgagctattaagggacagctcatcatgtatacgtctcgacatcatcat
tactctgtttcgggcggagcggccgccattggactcggcaccgagaactgcgttcaagtt
ccctgcgatgacaaaggccgaatgattcccgtcgaattggagcgcttgatcacccgccat
aagagtgagggtcaccttcccttcttcgtcaattgtaccacggggacaaccgtgtacgga
gcctttgatcccatcaactccatcgccgacatctgtgagaagcaccacatctggcttcat
attgatgccgcttggggtggtggattactgatgagcaggaagtaccgagaaagcaaattc
aaaggaattgagagagctgactcagtcacttggaatcctcacaagctcatgggaacgctt
ctccaatgttccaccctccatgtcagagagagtggattgttgatcagttgcaaccaaatg
tcagccgactatctgttccaaacagataaggtctacgatgtctgctatgacactggcgac
aaggtgatccaatgtggacggcacaacgacatcttcaagttctggcttcaatggcgctct
cggggcatgtctgggtttgagcgtcaaatcgaacgcctgatggaactgactgcttatcaa
gtccgacggatgaaagaggaaggcgagaagttctacttgttgaatgacgaacccgagtgt
accaatgtaatcttctggtacgtcccggaaagactccgacctcgacaatgcccacaatac
gagaccagagattggcagctcgaactcggaacggtgcggacaaaagaatattttatgatg
gatgaaaaggaacaaaaacgaatgttgggggtctcttttcaggttacggcaaagttgaag
ggaaagatgatgagcgagggctctcttatggttagctatcaaccattgggaatgcttccg
aacttcttcagaagcatcatttccaaccaagcagtgggggaggtcgacattgatttcatg
ttggaggaaatggaacgtcttggaaaggatctttaa
DBGET
integrated database retrieval system
