Tigriopus californicus (tidepool copepod): 131879556
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Entry
131879556 CDS
T09700
Name
(RefSeq) chitooligosaccharidolytic beta-N-acetylglucosaminidase-like
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00511
Other glycan degradation
tcf00513
Various types of N-glycan biosynthesis
tcf00520
Amino sugar and nucleotide sugar metabolism
tcf00531
Glycosaminoglycan degradation
tcf00600
Sphingolipid metabolism
tcf00603
Glycosphingolipid biosynthesis - globo and isoglobo series
tcf00604
Glycosphingolipid biosynthesis - ganglio series
tcf01100
Metabolic pathways
tcf04142
Lysosome
Module
tcf_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
131879556
09103 Lipid metabolism
00600 Sphingolipid metabolism
131879556
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
131879556
00531 Glycosaminoglycan degradation
131879556
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
131879556
00604 Glycosphingolipid biosynthesis - ganglio series
131879556
00511 Other glycan degradation
131879556
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
131879556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
tcf03110
]
131879556
Enzymes [BR:
tcf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
131879556
Chaperones and folding catalysts [BR:
tcf03110
]
Intramolecular chaperones
Others
131879556
BRITE hierarchy
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Motif
Other DBs
NCBI-GeneID:
131879556
NCBI-ProteinID:
XP_059081896
LinkDB
All DBs
Position
4:1117225..1119665
Genome browser
AA seq
516 aa
AA seq
DB search
MVECQLTCDEYALLWPKPKSAQLGKTVSTVSVSRIDLVNDDSGDVQVIKMLHRIINDQIA
WMKLKSNEQSPNSSEHELRITYLGGDGNSTEPKICRESQEGYTLSTAKAGSVITIEDLPK
FSHRGISLDTSRNFIPAKTFKHDPIRCTLNTRSINTQDQIKDILEYANYRGVQVIPEQNQ
PAHVGHGWNFPGAENYTVCLNAEPWYDYCVEPPCGQLNPGEAEIYNVLEKLYTEFYDMLC
SNSPRSTWEQMKSISRSGTRANWYLTTWLKLDVIRRKKLWCEFQEKSSAKLKSVYETKKD
ENETSLRIIVWTSRITLPEYNDNLDPDTYTIQIWTKGSNNLSDPTISSLLDKGYDVIFSN
YESTYLNCGFGAWVGEGKNWCSPYMGWQELYENDIYKLVERRGFQLTDKIKSQILGGETN
MWSEQVDNTLVEGNIFPRSNTFAERLWSNPSTNWYEAETRILNHRHSLVQRGIRAAALQP
EWFRLNEGQCYGNTDTPNFEIAASETTTDTLEASST
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggtcgagtgtcaattgacttgcgatgaatacgctttgctgtggcccaaacccaaatcc
gctcaattgggcaagactgtctcaaccgtgagtgtttcgaggattgacctggttaatgat
gattccggcgacgtacaggtgattaaaatgctccatcggattataaatgatcaaattgct
tggatgaaactcaaaagcaatgaacaatcgcccaattcatctgaacacgagttgcgaatc
acttatttgggaggcgacggcaattcaactgagccgaaaatttgccgagaatcccaggag
ggatacacattgtccactgccaaggcaggctctgtgatcacgattgaggatctgcccaaa
ttctctcaccgaggaatcagcttggacacctctcggaacttcatcccagcgaaaactttc
aaacatgacccaatacggtgcacattaaacacccgtagcatcaatactcaagatcagatc
aaggacattcttgagtatgccaattatcgaggggttcaagtaatccctgagcagaaccaa
ccggctcacgtgggccatggatggaactttcccggggctgaaaactacacggtgtgcttg
aatgccgaaccttggtacgattattgcgttgagcccccttgtggtcaactcaatccggga
gaggctgaaatctacaatgtcttggaaaagctgtacactgagttctatgacatgttatgt
tccaattcacctcgttccacatgggagcagatgaagtcaatttcgcgttctggaactcga
gccaattggtacttgactacatggctaaaattggatgtgataagaaggaagaagctctgg
tgtgagttccaagagaaatccagtgccaaactcaagagtgtttacgaaaccaaaaaggac
gaaaacgaaacgtcattgagaatcattgtctggactagccgcatcactctcccagagtac
aatgacaacttggaccctgacacctacaccattcagatttggaccaaaggatctaacaac
ctctccgatccaaccatttcgtccttattggacaaaggttatgacgtgatcttttctaat
tatgaaagcacctatttgaattgtggctttggagcttgggtgggtgaaggcaaaaattgg
tgctctccttacatgggttggcaggagctttacgaaaatgacatctacaaattagtagaa
cggaggggcttccaattgactgataagatcaagagccaaatcctaggtggagaaaccaat
atgtggtccgagcaggtggataataccttggttgagggcaatatctttcccagatctaat
acatttgctgaacgactctggtccaatccctcgacaaattggtatgaagccgaaaccagg
atactcaaccatcgacatagcctggttcagcggggaatccgagcagctgctcttcaacca
gaatggtttcgattgaatgaaggtcaatgctatggtaatacggatactccaaactttgag
attgctgcatccgagaccaccacggatactttggaagcttcatcaacatag
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