Tigriopus californicus (tidepool copepod): 131879595
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Entry
131879595 CDS
T09700
Name
(RefSeq) pickpocket protein 28-like
KO
K03440
acid-sensing ion channel, other
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tcf04040
]
131879595
Ion channels [BR:
tcf04040
]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
131879595
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASC
Motif
Other DBs
NCBI-GeneID:
131879595
NCBI-ProteinID:
XP_059081936
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Position
4:8817816..8819855
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AA seq
646 aa
AA seq
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MSNFVSYPKRAFEMLLKNKISSKPLVPNKTRVVVQKRRRRYRLTPFKRTLRGYAGSASVH
GINYFADMGQHWCPRFFWLVAVLFFLMLGSYWSGLDYLHWISHPVVITAKSFGKPISNLE
FPAISICSQGFNLDILDKILDNSNVNNTWFRFMIQGMISGDMERFVESCLLRKGNLKDCF
NNWDHDPSFEEPIIAKTQSIDLFLNPKRVDEKRRLIRDAQTTIRNLFTEYDIDLDNKTLT
DLLWHSSLPCFDQNRISNHNHQYESLKWCSWKNVPVPCSAIFQKFPTIEGICCAFNLNAA
DLYVENSLREWILTSQREDFLNSFEKAEAFSGWPSNPIPKAGKQNGLMVMLDAHSDSISA
GSVKDDFTGFLALVGGAKNNPLYPETKVLLKPGHENLVTLSGLEITPDFDIYVMPPTTRG
CYFRHEFELWVHRYYSRRNCVLECRMMKTLDMLPKADQCIPWNFPNAFPNLTMCNPWQKE
KFMETFLDIAEDVCLQCLPDCHEVQYSASVTAAPIRRCDKQNLGISPLCDINVESLPDPP
IWGSAIFDQFGKEGQAIPKHIQRNIPPNVRYSVTDRTPYNAYDRDIAVAAFYFESSTLFE
YSRQARMTWIEFVAQVGGLLGLCLGLSFVSFLEVIYWFTYKFWVNW
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaactttgtctcgtatcccaaaagagctttcgaaatgcttttaaagaataaaatc
agctccaaacctctcgttccaaataaaacaagggtagtcgtccaaaaaagacgccggcga
tatcgtttgacgcccttcaaacgaaccctccgaggctacgcaggttcggccagtgtccat
gggatcaactatttcgctgatatgggtcaacattggtgtccaagattcttttggttggtt
gccgtgcttttctttttgatgttgggttcctattggtcaggattagactatcttcattgg
atcagtcaccctgtggttatcactgccaagagcttcgggaaacctatttccaatttggaa
tttccagccatctctatatgtagccaaggtttcaatcttgacatattggataaaatcttg
gacaactcgaacgtgaataacacctggttcaggtttatgattcaaggcatgatttctggt
gacatggaacgcttcgtcgaaagttgtctattgaggaaaggaaatttaaaagattgtttc
aacaactgggaccatgatccatcctttgaagaacccattattgccaaaactcagtccatt
gacttgtttttgaacccaaagcgagtcgacgagaaacgaagacttattcgagacgctcag
acaacaattaggaatctttttactgagtatgacatagatctcgacaataagacgctaaca
gatctactctggcactcaagcttgccctgcttcgatcaaaatcgcatttcaaaccacaac
catcagtacgaatcactcaaatggtgttcctggaaaaacgttcctgttccatgctcagca
atttttcaaaagtttccaacaattgaaggtatatgctgtgcattcaacttaaatgctgcc
gatttatacgtcgaaaactctcttcgagaatggatcttaaccagtcaacgagaggatttt
ttgaacagctttgaaaaagcagaagctttttcagggtggccaagtaatcctattcccaag
gccggaaaacaaaatggtttaatggtgatgcttgatgcacattcagattctataagtgcg
ggctcagtcaaagacgacttcacgggctttctggctttagttggcggcgcaaagaacaat
cctctctatccagaaaccaaagtccttctgaaaccgggtcacgaaaacctggtcacactg
tctggcttggaaatcactccggattttgatatctacgttatgcctccgacaactagaggt
tgctatttccgccatgaattcgaactttgggttcataggtactattcaagacgaaattgt
gtccttgaatgtcgtatgatgaaaactttggatatgcttcccaaagccgatcaatgcatt
ccttggaactttccaaacgcctttccaaatttgaccatgtgtaacccatggcaaaaggag
aaattcatggaaacattccttgatattgccgaagacgtatgtcttcaatgcctcccagat
tgtcacgaggtccaatattcagcttctgtgacagcagcgccaattcggcgttgcgataag
caaaatctcggaatttcaccgttgtgcgacatcaatgtggaatcattgccggatccgccc
atttggggttcagctatcttcgatcaatttggaaaagaaggtcaagcaattcccaagcac
atccagcgcaatattcctcctaatgttcgctattctgtaacggatcggacgccctacaac
gcttacgatagagatattgccgttgccgcattctactttgagtcctctaccctatttgaa
tattcacgtcaagctcggatgacttggattgagtttgtggcccaagtgggaggattgttg
ggattatgcctgggccttagttttgtgtcctttctagaggtgatttattggttcacttac
aaattctgggtgaattggtag
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