Tigriopus californicus (tidepool copepod): 131879748
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Entry
131879748 CDS
T09700
Name
(RefSeq) vesicle transport protein USE1-like
KO
K08507
unconventional SNARE in the endoplasmic reticulum protein 1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
131879748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131879748
Membrane trafficking [BR:
tcf04131
]
SNARE
SNAP-25[C] (Qc)
Use1
131879748
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Use1
PFF1_TM
CoV_S2
Pox_EPC_I2-L1
ZNF380_CC
Motif
Other DBs
NCBI-GeneID:
131879748
NCBI-ProteinID:
XP_059082137
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All DBs
Position
4:complement(7858646..7859962)
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AA seq
307 aa
AA seq
DB search
MSPSEENGNSTRNRRSWEELEVRLQLRALEKQCNEWISQDHPQIGQKTRANLQYIDRQVQ
ALQRHPQAPSREDGLGYQRKIEFLRQTLDGIEERLPEQSPHHAPVSLGVDVPSLGLTRDT
PLQFPQAQAAPMLKRTSPNETPTRLPVIRPYGYAPLPWSARQADPLAREIFQKASQRQPM
EERRELLGQSDAELRQRKPAPVDGALEDLMKVHQDAQEQVAEEMLKLTRSLKEQSMAAGE
IIRNDTASLERTNELAEANRTRLGLESERLNKHTQQLCRWWIWLIIFLVTVTFVAMVMIM
KIFRKRW
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtctccctccgaagaaaacggcaacagcactcgtaatcgtcgctcctgggaagaatta
gaagtgcgactccagcttcgagctttggaaaagcaatgcaatgagtggatctcacaagac
catccccagattgggcagaaaacccgggctaacctccaatacattgaccgacaagtccaa
gcccttcaacgccatccacaggctccgagtcgggaagatgggttgggttaccagaggaaa
atcgagtttctgcgacaaacgttagatggcattgaagagcgccttccagagcaaagtcca
catcacgcgccggtcagcttaggcgttgatgtgccctcactcggattaacgcgtgatacg
ccgctgcaatttcctcaggcgcaggcagcgcccatgctaaagcgtactagcccgaatgaa
acacccacacgcttacccgtcattcgaccctatggttatgcgcctttaccctggtcggca
cgccaggcagatcctttggcgagggaaatttttcagaaggccagccaaaggcaacccatg
gaagaaagacgggaactcttgggtcaatcggatgcggaattgcgccaaaggaaaccggca
ccggtagatggggcgttggaagacctcatgaaagttcaccaagatgctcaagagcaagtt
gccgaggagatgctgaaactgacccgatcgctcaaggagcaatccatggcagccggcgag
atcatccgaaatgatacggccagccttgaacgaaccaatgagttagccgaagcgaatcga
acccgtctaggcttagaatccgagcgtctcaataagcacacgcaacagctctgtcgttgg
tggatatggctcatcatttttttggtcacagtcacttttgtggccatggtgatgattatg
aaaatctttcggaagcgctggtga
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