Tigriopus californicus (tidepool copepod): 131879883
Help
Entry
131879883 CDS
T09700
Name
(RefSeq) fanconi-associated nuclease 1-like
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
131879883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcf03400
]
131879883
Enzymes [BR:
tcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
131879883
DNA repair and recombination proteins [BR:
tcf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
131879883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAN1_TPR
VRR_NUC
FAN1_HTH
Fan1_SAP
zf-C2H2_4
zf-C2H2_FBX41
zf-C2H2
TOP_N
Motif
Other DBs
NCBI-GeneID:
131879883
NCBI-ProteinID:
XP_059082334
LinkDB
All DBs
Position
4:1098593..1101743
Genome browser
AA seq
870 aa
AA seq
DB search
MDTMNGPRTIMDFFQRPSGLKCPICGDAFPKLADLNRHLDLNMCQPSPTPEEELFDDSDP
DPDLHDLVVLTPPPKHHHTLSPSPSSSPLKASPTLSKFPNRFGTSLEALGPIQRTSPSSS
KARNKAHRFSPLSQISSPKKVPRALFLMESPPHVPLTQSKKQDPAHVPYYLVNFECILKG
VIEETDDRDLLDETELGWIQDFQRLEINAKKLYVRLFGRKFGWLTANNIRYEEIANLSQA
LKDLRDVRFLDSGADLADLESILKLVPAPEIRLLCKEFKIVAQGTQKADFIQALLKHSRR
KSFFLSSNGNSMEKILRRKASQMVGECFKLVDEVRKVFLRVLSLYSLTNWWDERENEKGQ
PQQLTTLLLMNQGKMVFPPYKIIRQRKIFESRSDLLAFEEACVIEARMSEAFDKKDWLIA
EDIYHEALAMFKATLDQSEYQAKAEKLPVFLRKFTRGAILVYVLTKSVEVLERNKKHDQA
VKLIQTLLEQDTYLPDYRGHWYERLVLDLDQHLKQPLESIRQVMNGLNDANVREARKLSL
FQRVEKICGAKKNTKLLPHLKTAQARSDWLNLAEAPKVEIQGRLMPKDNLPGAKTVFLFE
HADQRLLCSVEEYVREYYKTLGFSQGLHGEGAVVNTICALLFWDILYDLDIPDAFRSPSQ
PVPLDFNTDDFYLARKPQIDDRLDDLLHWTDLELNDWVQERWEQSHGVISLVNWDLFHNV
EHILGLIHCFKRDQLHGICDRLIKKHRYTRSGYPDLTLWNPETKTVEIVEVKGPNDRLSN
KQILWLDYLNSLGVKAVVCHVVAVGGKKLSSSPFKITRGSPQKAPTPSLSSTSPQTIGKK
RMESHHRSDASRSKKRKSNTLIDSDDDFVP
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggacacgatgaacggtccccggactatcatggactttttccaaagaccttcgggtctg
aaatgtcccatttgcggagacgcctttcccaagttggcggatctgaaccgtcatctcgac
ctcaacatgtgccaaccgtcacccactcccgaggaggagctctttgacgactcggatccc
gatcctgatttgcatgacttggttgtgctcaccccgccccctaaacaccaccacaccctc
tccccgtcccctagctcgtctcccttgaaagcctcccccactttaagcaagtttcccaat
cggtttggcacgtccctggaagctttagggcccattcaaagaacctctccaagctcctcg
aaggcccgaaacaaagcccaccgattctcgcccttgagtcaaatcagctcgccgaagaag
gtcccaagggccctgttcctcatggaatcgcctcctcatgtacccttgacccagagcaaa
aaacaagatcccgcgcatgtaccgtattatttggtcaatttcgagtgcattttgaagggc
gtgattgaagaaaccgatgatcgagacttgttggatgagactgagttgggatggatccaa
gatttccagcgattagaaatcaatgctaagaaactctatgttcggttgtttggtcgcaaa
ttcggctggttgacggccaataatattcgttatgaagaaattgccaacttatctcaagcc
ttgaaagacttgcgagatgttcgatttctggatagtggggccgatttggccgatctggaa
tcaattttgaagctcgtgcccgcacccgagatccgcttgttgtgcaaggagttcaagatt
gtggcccaagggacgcaaaaagcggatttcattcaggccttactcaagcattcccgacga
aagtccttctttttgtcgtccaatggcaattccatggaaaaaatcctgcgccgaaaagcc
tctcaaatggtaggcgaatgcttcaaattggtggacgaagttcggaaggtgttcctcagg
gtactttcattgtactccttgacgaattggtgggatgaacgggagaatgaaaaaggccaa
ccccaacaactgaccactcttttgttgatgaatcaaggcaagatggtcttccccccgtat
aaaatcattcgtcaaaggaaaatcttcgagtcacggtcagatcttttggcctttgaggaa
gcgtgtgtgattgaggcgaggatgtccgaggcttttgataagaaggattggttgatagcc
gaggacatttaccacgaagctctggccatgttcaaggccacattggaccaatctgaatac
caagccaaggctgaaaaactcccagtatttctaagaaagttcactcgaggcgccatcttg
gtatacgtcttgaccaagagtgtcgaggttctggagcggaataaaaagcatgatcaggct
gtgaaactcatccaaacccttttagagcaggatacgtacttgccggattatcgagggcac
tggtacgaacgattagtactagacctcgaccagcatctgaagcaacctctcgaatccatt
cgccaagttatgaacgggctcaatgacgccaatgttcgtgaagctcggaaactgtctttg
ttccaaagggtcgagaagatatgcggggccaaaaagaacaccaaactactgccacacctc
aaaactgcccaagcgcgctcggattggctgaatctcgcggaagcgcccaaggtcgagatt
caaggccgtttgatgcctaaagacaacctacccggagctaaaaccgtgtttctctttgaa
cacgccgatcaaagactattatgctcggtggaggaatacgtccgagaatactacaaaacc
ttgggcttctcccaaggattacacggagaaggggctgttgtgaacacgatctgtgccctg
cttttttgggacattctctatgatctagatatcccggatgccttccgtagtcccagtcaa
cccgtaccgttggattttaacactgatgacttttacttggccagaaaaccccagattgac
gatcgactggatgatctactccactggaccgatctggaactaaatgattgggtccaagag
cgatgggaacagtctcacggtgtgatttcattggtgaattgggatctttttcacaatgtg
gagcacattcttggtctgattcactgttttaaacgggaccaattgcacggcatctgtgat
cgactgatcaagaaacatcgctacacgcgctcgggttatccggatctcacactgtggaac
ccggagacaaaaacggtcgagattgtcgaggtcaaaggtccgaatgatcgattatccaac
aagcagatcctttggctggactatttgaacagtttgggtgtgaaggctgtcgtttgccat
gtcgtcgcggtgggcgggaagaaactctcctccagcccttttaagataacacgtgggtct
cctcaaaaagcacccacaccctcattgagctcaacttcgccccaaaccatagggaagaaa
cgcatggaatctcatcatcgatcggacgctagccgctccaagaaacgtaagtctaacact
cttattgactccgatgacgactttgtaccttga
DBGET
integrated database retrieval system
