Tigriopus californicus (tidepool copepod): 131879892
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Entry
131879892 CDS
T09700
Name
(RefSeq) sodium channel protein para-like
KO
K04834
voltage-gated sodium channel type II alpha
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tcf04040
]
131879892
Ion channels [BR:
tcf04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
131879892
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
GPHH
SieB
Motif
Other DBs
NCBI-GeneID:
131879892
NCBI-ProteinID:
XP_059082353
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Position
4:4471231..4544067
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AA seq
2256 aa
AA seq
DB search
MSEDSDSQTEEERPIFRPFTRESLAQIEARIQEENEKKRELEKKRAEGEVRYDDDDDDDG
PIPDPALEGGMPVPIRLAAEFPPELVATPIEDIDPYYADKKTFIVISKGKDIFRFSGEDA
VWALSPFSPVRRVAIHILVHPLFSLIIITTILLNCFMMIMPSSAKIESSEVIFTAIYTFE
SATKVMGRGFILEPFTYLRDAWNWLDFIVITLAYITMGIDLGNLAALRTFRVLRALKTVA
IIPGLKTIVGAVIESVKNLRDVIILTVFALSVFALLGLQIYMGVLTQKCIQNFPEELIEK
YLYQSNTSMDQFHEAWAQFNENSSNWFWLEGAAHPVLCGNATGAGTCPDNYTCYQGFGRN
PNYGYTSFDTFAWSFLSAFRLMTQDVWEDLYQSVLRTAGSWHIIFFLVIIFLGSFYLVNL
ILAIVAMSYDELQKKAEEEEEAALAEEEALREAEEAAAMEEQKFVQGDEGLDVVDEADED
EIKMSPPDNRSEQSYELFVKHPPDPGETKDQLSVFSEEPDDDNISDSDYEANNGRTNSRL
RHRRASYSLPNSPFIGHSHLHGHTYMNAGPYPLPPPSTASCRRKNMCSRHSSSSCSKASS
PHQMSWRSSCGPGTRKPPPLSDAALSSYFEISLPYVDDSDALTESTSEVSLPQYWRPPKG
GTGAGGGPPAGSLSRKNSYCSHGSRWSYSSHALDHPPNHNQHHHPPSHPHPPPPPHHSHH
VLHDPLSAASSYRHIYRSASRSGWCTADVEDEDEDDRLGGERPYPPTSDDNLNTSSYPPD
YLEVEGRTTSDTVANGHLDDDHEDDHEDDLLSNGGFKSKLGLSPSIGEASYTSQRSFRKP
SNHSNPFLDPSQRQSVVDMKDVMVLNDIINQAASRGGSQDTRRTSRKISMFLTSDVEDEG
PNFKERLVAAAYKFIDIFCVWDCCNAYIRLAEFLSFIIFDPFIDLFITLCILVNTLFMAL
DQHDMDPSLNETLKQGNYFFTATFAIEAVIKLLAMSPKYYFQEGWNIFDFIIVALSLIEL
GLASISGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGKTVGALGNLTLVLGIIIFIFAVM
GMQLFGKSYEDNIDRFRTKEMPRWNFVDFMHSFMIVFRVLCGEWIESMWDCMWVASKVCV
PFFLATVVIGNLVVLNLFLALLLSSFGASNLSSAGAVDDDTNKLSEAFNRMGRFRRWVTR
GILRGLVYVRDKIIQCCRNQINSRRIVPTKPNDPHQDWDSNLHAGWDSNDINEDASVTDG
LMRKMEDEQRLDDDQAMTQFDVKIGVGMDIAIHGENGDVGNEDWRTALHNHKRSVSTRNG
GFMAPSHDFELIPFDELSLSSYGSHKNRTFNVGSHKGSLHSFNGAMENGLMTKSAAPVRS
VMIDDEHIETKSISDMDDPADAQARIEAEILEATTQELMMQEYPAECCPDKCYIRFPFLA
GDHDSPFWQGWGALRIKTFRLIENKYFETAVITMILVSSLALALEDVHLKNRPVLQDVLY
YMDRIFTVIFFLEMCVKWLALGFVKYFTNAWCWLDFVIVMVSLINFTASLLGAGGIQAFK
TMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLMVCLIFWLIFAIMGVQMFAGKY
YKCIDLLTGLRVSAEIVPNSEACLSENNTAWVNSRITFDHVGHAYIALFQVATFKGWIPI
MNDAIDSRDLGQQPIREVNIYMYLYFVFFIILGSFFTLNLFIGVIIDNFNEQKKKAGGSL
EMFMTDDQKKYYAAMKKMGNKKPVKAIPRPRWKPQAIVFGIVTNKKFDMIIMLFIALNML
TMTLDHYGQSEMWSFALDNLNMGFIVIFTSECVLKIFALRQYYFKEPWNVFDFVVVILSI
LGIVLSDLIEKYFVSPTLLRVVRVAKIGRVLRLVKGARGIRTLLFALAMSIPALFNICLL
LFLVMFIFAIFGMSFFMNVKQRGTLDSVYNFETFGQSMILLFQMSTSAGWDGVLNGLMNE
EDCQKDNPETGVAGNCGNSGMAIGFLLCYLVISFLIIINMYIAVILENYSQATEDVQEGL
TGDDYDMYYEIWQQFDPDGTQYLKYNALSDFLDVLEPPLQIHKPNKYKIISMDIPICKGD
LCYCVDVLDALTKDFFARKGNPVEETAELGEVTAHTDRPGYEPISSTLWRQREDYCARLI
QHAWKRRGAPEEEDESPFNYNPRDDTEESDESEEDEAIPPHIPPERRPLTSNSTRRRNNT
SRLSQPSVEAVDVVVHSRSSSVSSTTTTGGNRLFDV
NT seq
6771 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagattcggactcgcagactgaggaggagcgcccgattttccgtccttttacc
cgagagtccttggctcaaattgaggcccgaattcaagaggaaaacgaaaagaaaagagaa
ttggagaagaagcgagctgagggagaggttcgctacgatgacgacgatgacgatgatggg
ccaatccccgacccagctcttgaaggcggaatgcctgtccccatccggttggccgcagaa
tttccacccgagctcgtggccacgcccatcgaagacattgatccttactacgctgacaaa
aagactttcatcgttattagcaaaggcaaggacatctttcgcttctcgggagaagatgcc
gtatgggccctctcgcctttcagcccggttcgacgagtggccatccacatcctggtccac
ccgctcttctccctcattatcattactaccattctcttaaactgtttcatgatgatcatg
ccctcaagtgcgaagatcgagtcatcagaggtgatttttaccgccatctacacgttcgag
tctgccaccaaggtcatgggaaggggattcattcttgagccgttcacctacctccgggat
gcttggaattggttggatttcatcgtcatcactctcgcatatatcaccatgggtatcgac
ctcggaaacctggctgccttacgtacctttcgggttctcagggccctcaaaactgtggcc
atcattccaggcctgaaaaccatcgttggagctgtcatcgaatctgtgaaaaatcttcgc
gatgtgatcattttgacagtgttcgctctctccgtgttcgccctactcggccttcagatc
tacatgggggttttgactcagaagtgtatccaaaattttcccgaggaactcatcgagaag
tatttgtaccaatccaatacgtccatggatcaattccacgaagcctgggcccaattcaac
gagaactccagtaactggttctggttagaaggggccgcccatcctgtcctgtgcggtaac
gccaccggagctggaacgtgtcctgataactatacctgctatcagggatttggccgcaat
cctaactacggctacaccagcttcgacacattcgcctggtcgtttctgtcggcctttcga
ttgatgactcaagacgtgtgggaggatctctaccagagcgtgctcagaacggccggatcg
tggcacatcattttcttcttggtcatcatcttcctcggctcgttctatctggtcaatctg
atcttggccatcgtggccatgagttacgacgaactccagaagaaagccgaagaagaagag
gaagctgctttggcggaagaagaagctctcagggaagctgaggaggctgcggctatggag
gaacagaaattcgttcaaggagacgagggcttggatgtggtggatgaggctgacgaggac
gaaatcaagatgtctcccccagacaaccgctcggaacagagctatgaattgttcgtgaag
catcctcctgatcctggcgagaccaaagatcagctgagtgtcttttctgaagagcctgat
gacgacaacatctctgactcggattacgaagccaacaatggccggaccaattctcggctt
cgacatcgacgggccagctacagtctccccaattctccgttcattggccactctcacctt
cacgggcacacatacatgaatgcagggccataccctctcccacccccgtccacggccagc
tgtcgtcggaagaacatgtgttcacggcactcctcctcgagctgctccaaggcctcgtcg
ccgcatcaaatgtcttggcgctctagttgcgggccagggacccgcaagccaccccctctt
agtgacgcagcactctcgtcctattttgaaatcagtcttccctacgtagacgacagtgat
gccctcactgagtccaccagtgaagtgtccttaccccaatattggcgtccccccaagggt
ggaaccggggccgggggcgggcccccggcgggcagcctcagtcgtaaaaattcatactgt
tcacacggatctcggtggtcctactcctctcatgccttagatcaccctcctaatcacaat
caacatcatcaccctccttctcatcctcatccgcctcctcctcctcatcattcacaccat
gttctccatgatcctctgtccgcggcttcttcttatcgccacatataccgttcagcctcg
cgctccggttggtgtacggcggatgtggaggacgaggatgaggacgatcgattagggggt
gaacgcccttatccgcccacttcggatgataacctcaacacttcgtcctatccgcccgat
tacctcgaggtggagggacgaacaacctctgatacagttgccaacgggcatctcgacgac
gatcacgaggatgaccacgaggacgaccttttgagtaatggtggattcaaatccaagctg
ggcctctctccctccattggagaggcaagttacaccagtcagagaagtttccggaagccg
tccaatcacagcaatccatttctggatccaagtcaaagacagtcagttgtcgacatgaaa
gatgtcatggtcctgaacgatatcataaatcaagctgcttcgcgtggaggttctcaagac
acccgacggacttcgaggaagatcagcatgttcttgacatccgacgtcgaggatgagggt
ccaaatttcaaggagaggctggtcgctgccgcctacaagttcatagacatattctgtgtt
tgggattgctgcaatgcatacatcagattagccgagttcctctcgttcatcatctttgat
ccgttcattgatttgttcatcaccctctgcatcttggtgaatacgcttttcatggctttg
gatcaacacgacatggaccccagcctcaatgaaacattaaaacaaggaaactactttttc
acggccacctttgccattgaggccgtcatcaagttgctggccatgagtcccaaatactac
ttccaagagggttggaacatctttgattttatcattgtggccttgtccttgattgagttg
ggattggccagtatatctggcttgtcagtcctccgatccttccgtttgctccgcgtcttc
aagctcgcaaaatcttggcctaccctcaacttgctgatctctattatgggcaagaccgtg
ggcgctttgggcaatcttacgttggttttgggaatcatcatcttcatcttcgccgtcatg
ggcatgcaactctttgggaaaagctatgaagataatatcgatcgattccgaacgaaggaa
atgcctcgatggaactttgtggatttcatgcacagtttcatgattgttttccgtgtgctc
tgtggggaatggattgaatccatgtgggactgcatgtgggttgcctcgaaagtctgcgtg
ccattcttcttggctacggtcgtgatcggaaatctggtggtgttgaacctctttctggct
ttactcttgtcgagctttggagcgtcgaatttgtcctctgcgggcgctgtggacgatgat
accaacaaattgtcagaggccttcaaccgaatgggtcgattccgacgttgggtcactcgt
ggtatcttgaggggactggtttacgtcagagataaaatcattcagtgctgtcggaaccag
atcaactccaggcgaattgtcccgaccaagcctaatgatccccaccaagattgggactca
aaccttcacgctggctgggattcgaacgacatcaacgaggatgcttctgttacagatggc
ctcatgagaaaaatggaggacgagcagagattggatgatgaccaagccatgacacaattt
gacgtcaaaataggcgttggcatggacattgccattcacggagaaaacggtgatgttggc
aacgaggattggcgaaccgctctgcacaatcacaaaaggagtgtttccacccgaaacgga
ggcttcatggctccgtcccacgactttgagctcattccctttgatgagctcagcctgtcc
tcttatgggagtcacaagaatcgcacctttaatgtgggcagtcacaaaggctccctgcat
tcgtttaacggagccatggagaatggattgatgacgaaatccgctgctccagtgcggagc
gtcatgatcgatgatgagcatatcgagaccaaatccattagtgacatggatgacccggct
gatgctcaggccaggatcgaggccgaaattctcgaagccaccactcaagagctcatgatg
caagaatacccagccgagtgctgtcccgacaaatgctacattcgattcccattcttggcc
ggtgaccacgattccccgttctggcaaggctggggagcactcaggatcaagaccttccgt
ctcattgagaacaaatactttgaaaccgctgtgatcaccatgattcttgtcagtagttta
gccttggctcttgaggatgtccatttgaagaaccgtcctgtccttcaagatgtactctat
tatatggaccgaattttcaccgtcatcttcttcctggaaatgtgcgtcaagtggctggcc
cttgggttcgtgaaatactttaccaacgcgtggtgttggctggactttgtcattgtcatg
gtatcgttaatcaacttcacagcctccttactaggagctggaggcattcaggcctttaag
accatgcgaaccttgagggccttgcgccccctcagagccatgtccaggatgcaagggatg
agggttgtggtcaacgctctggtacaagctatacctagtatcttcaacgtgctcatggtt
tgtctcatcttctggctgatctttgccatcatgggtgtccaaatgtttgccggaaagtac
tacaagtgcattgatttactgactgggctccgagtgagtgctgagatcgtgcccaactca
gaggcgtgcctctctgaaaataacacggcttgggtgaatagtcgcatcacattcgatcat
gtgggccacgcctacatagcactctttcaagtggccactttcaaagggtggattccgatc
atgaatgatgccattgactcccgagatcttggacaacaacctattcgagaggtcaacatt
tacatgtacctctacttcgtgtttttcatcatcttgggatcctttttcacactcaatcta
ttcattggagtcatcatcgacaacttcaacgaacaaaagaaaaaggcaggaggctccttg
gaaatgttcatgacggatgatcagaaaaaatattatgcagccatgaagaagatggggaac
aagaaaccagtcaaggctattccaagaccaaggtggaagccccaggccattgtttttggg
attgtgaccaacaaaaagttcgacatgattatcatgctgttcattgccctgaatatgctg
accatgaccttggatcattatggtcaatctgagatgtggagtttcgccttggataatctg
aacatggggttcattgtgatattcaccagcgagtgtgtgctcaaaatctttgctcttcgt
caatactacttcaaagagccctggaatgtctttgactttgtggttgtgatactttctatc
ttaggcattgtcctcagtgatctgattgaaaagtactttgtgtcgcctaccttgctgcgt
gtggttcgagttgccaagattggacgcgttcttcgtttggtcaagggagcacgggggatt
cgaactctcctatttgccttggccatgtccattccggccctctttaacatctgtctcttg
ctcttcttagtcatgttcatcttcgccattttcggcatgtctttcttcatgaacgtcaag
caaagagggaccctagacagcgtgtacaactttgaaacctttggtcagagtatgatcctt
ttgtttcaaatgtcgacgtcagccggatgggacggggtactgaatggactcatgaatgaa
gaagactgtcagaaggacaatccagaaactggtgtggcgggcaattgcggcaacagtggt
atggccatcggcttcctcctctgttatctggttatcagtttcttgatcattatcaacatg
tacatcgctgtgattttggaaaactactctcaagccacggaagatgttcaagaggggctc
acaggagacgactacgacatgtactacgagatttggcaacaattcgacccggacggcacc
cagtacttgaagtacaacgcgctctcggatttcttggacgttttagagcctcccttgcag
atccataaacctaacaaatataagattatcagtatggacattcccatctgcaagggggat
ctttgctactgcgtggacgtcctagatgcgttaaccaaggacttctttgcccgaaagggt
aaccctgtggaagaaacagccgagctaggggaagtgaccgctcacactgaccgacctggc
tacgaacccatttcttctaccctttggcgccaacgagaagactattgtgcccgactaatc
caacatgcttggaaacgacgtggtgccccggaggaagaggacgagagccctttcaattac
aatccaagagatgacacggaggagagtgatgaaagtgaagaagatgaggccattccacca
catattccgcccgaaagacgacccctcacctcaaattcaactcgacgccgcaacaataca
tcaagactctcgcaaccttccgtggaagcggtagatgtagtagttcattctcggtcttca
tccgtttcttcaacaactactacgggaggaaacagattgtttgatgtctaa
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integrated database retrieval system
