Tigriopus californicus (tidepool copepod): 131879897
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Entry
131879897 CDS
T09700
Name
(RefSeq) inactive ubiquitin carboxyl-terminal hydrolase MINDY-4B-like isoform X1
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcf04121
]
131879897
Enzymes [BR:
tcf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
131879897
Ubiquitin system [BR:
tcf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
131879897
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
Motif
Other DBs
NCBI-GeneID:
131879897
NCBI-ProteinID:
XP_059082358
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Position
4:2420224..2452578
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AA seq
570 aa
AA seq
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MSKQMNRRRKVSKKVISNEPPKRTEEKRPSGSKPSQPPTSAKKIHVSTISVVKSASVENS
SEKLVSEANSSEDETDGSDLHLSSADKEQRAKDNRKLLRDRVIYARKVGEEAATGQVLDG
EPIDYESACKIKELAWGSSNMPPKPEWLKQGIVFRPCDQLFAYGLKTHKNGTKNFLISLQ
AYFLKQLLFDMKKTGGAKSKDESSTKRQKNKNTRNLHIGQLSTLDQDPLITSTGSIQKSK
HKPAKTSLSTIFSSGSRSRPQPTEKCKGPSMAQLLKPGEKIQQEMLVGGLVELLSKIADG
KETVLCLPGPDNCFQPTAHFGIDGITEKLRVMRCSKDEELRTYVKKYSATLMQENGIGLI
SVLYSVILTRNFNRLAYDLQDQATNSLIDPIGDCTTGLLNLIITGRANPYLHNGIMVVED
EDNEESEEFSGEERRGMETRNDIGFLIWDQDEETTNRFHLGSRLKTPTLPIWITRCNGQF
GVLFNPNRELMRSYHAENRFQLYYYSDAEMKKGEYKETLLTIDTRNVGNQVVVDPSETEF
EEAPPPPLEKAIQTKWEGSTIDWGGITPYI
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcaaatgaaccgccgacgaaaggtctcaaagaaggtcatttcaaatgagccg
cccaagagaacggaagaaaaaaggccttccggttcgaaaccttcccagcctcccacgagc
gcaaagaaaatccacgtttcaacgatatcggtggtgaaatcagcctcagtcgaaaattcc
agtgagaaactggtctcagaggccaattccagtgaggatgaaacggatgggtcggattta
catctatcatccgccgacaaggaacagagagcaaaagataatcgaaagcttctccgggat
cgagtgatttatgcccggaaggtgggagaagaagcagccactggccaagttttggatggg
gagcccatcgattatgagtcagcttgtaaaatcaaagagttagcgtggggttcctccaat
atgccgcccaaacctgagtggttgaaacaaggcatcgtcttccgaccatgtgatcagctg
tttgcttatggcctcaaaactcataagaatggcaccaagaacttcctcatcagtcttcaa
gcgtacttcttgaagcagctgctgtttgatatgaagaaaactggaggagccaagtccaaa
gacgaatcatcgaccaagcgacaaaagaataagaacacaagaaatctgcacatcggacaa
ctttcaacgttggaccaagatccattgataacatcgacaggttccattcaaaaatcaaag
cacaaacccgccaaaacatccctcagcacaatatttagctctggttcacgtagtcgaccc
caacctacggagaagtgcaaaggtccgtctatggcccaattattaaagcctggagagaaa
atccaacaagaaatgctggtggggggtttggtggaattactctccaaaattgcagatggt
aaggagaccgtcctctgtcttcctggacccgacaattgcttccagcccactgctcatttt
ggcattgatgggataacagagaagctgcgagttatgcgttgctcaaaagacgaagaactg
agaacatatgtcaagaaatactctgcaacgctcatgcaagagaacggaatcggacttata
tctgtgctgtacagtgtgatattaacgagaaattttaacaggttagcttacgacttgcag
gaccaagccactaattcattgattgacccaattggtgactgtaccacgggacttctcaac
ctaatcatcacgggcagggccaacccctatcttcataatggcatcatggtcgtagaggat
gaagataatgaagaatccgaagagttctccggtgaggaacgtcgcggtatggaaacgcgg
aatgatattggcttccttatttgggatcaagacgaagaaacgaccaatcgattccacctg
ggttcccgcctcaaaactccaactcttcccatatggataacaaggtgtaacggacagttt
ggggtgttgttcaaccctaacagagagttaatgaggtcatatcatgcagaaaacaggttt
cagctgtactactacagcgatgccgagatgaagaaaggcgaatacaaggagaccctcctc
accatcgacaccagaaacgtgggcaatcaagtcgtcgtggacccgagtgaaactgaattt
gaagaagcaccacccccgccattggaaaaggctattcagaccaaatgggagggcagcacc
attgattggggtggaatcaccccctatatatga
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