Tigriopus californicus (tidepool copepod): 131879910
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Entry
131879910 CDS
T09700
Name
(RefSeq) rho guanine nucleotide exchange factor 28-like
KO
K21066
A-kinase anchor protein 18
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131879910
Membrane trafficking [BR:
tcf04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
131879910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
NDC80_loop
NET2A_C
PEARLI-4
RsbU_N
RIB43A
AdoMet_Synthase
GEMI5_RBS
Motif
Other DBs
NCBI-GeneID:
131879910
NCBI-ProteinID:
XP_059082386
LinkDB
All DBs
Position
4:2221939..2230149
Genome browser
AA seq
1503 aa
AA seq
DB search
MSGRLAQPVPAPPPRAPLPPPPIILSSDEAPDTGEESDEDLITSYLGGGGGGPASPATRL
PAFPDVLPHHAPSGDPPHHILADNLLQLAEIHENIQRMRLANTEGPSRPPRSHRAPRPES
LHQRWSTSCPALNHEAALDVVGGAVPAGSFDSGPSPESPSHPVPYYSTTTPTSSTSHTGR
SHRKRWPGAWSSGSTTEGPKHRGKTRPGRPRSYSASSNDSDDPFGQPSGDYVDGCLGGGH
GSQPRLRSASTVATTRGSLGNESNYGGPPSGPSSHRTPEKLLPRPPVGTRYTPNIFSQFP
GLHKSISTPSIATDHPHSRSAHRKGRDYPEPTHVFLQKLISEHEWTRRSGSDSDSDDEPQ
GPPPSGLLPEIEGRRQHHRVPFPLEPSVPAAHPSVQPAPSPQISLAEFLQDVPNLEDDDQ
RKRRRKKERSSIFFRKKKDKSKSASASLQTQPDGHLKSLAKAPSAISLSTKPLQTRVPQH
SYSMSSLRKPSSHNHYAGNFYHARGEMSKVNHEDRDDYGVQEDTTGLIEGEYVPGEEFSE
GGPAAIRNLETDPFLRIQDEEAESWQQAWKSQDLQGLTPTQIKRQEHIYELIVTESNHCQ
VLKVIQKIFVEGMYKYLNIPPEIVDRIFPCIEELIEIHFKFLEQLRIRQNAQPVVESVAD
LLLEQFAGESSKLWKEAYGTFCSQHSDAVSLYKDIYKSDRRFQQFIRHCANNPLLKKKGI
PECILFVTTRITKYPLLIEPLIKTARDLPQEQQKLRDASLFVRDILKDVNAKVAEKEREQ
RFLEIYKGIDAKSWVLYQGKKFKKSDILSESRKLMFEGLAVLHQGRGRSLSVTVVVLSDI
LFFLQENSQKYHFTTPEGKPGVIPVHTLIAREKTGPSTKALYLISTSERDPEMFELEIQQ
PPTRDDWITGIREAVDACSYGSDSEGGVSSNVLEARRNVEAKYMRMRHLTAELRGKDIEL
ARLLEDKMRVMGDMLVVLGTPNPFKDSPPDYLSLVREKDSHCTKEDLLNAVQEASRLASS
LYSSGSNLSRSVSSAGEKHSVTYASPTLPKRAETFGGFDQQQPTLPMGLIQQPPESLPAQ
SQESLRSSKPDEANPWRGLPSVPPLLNLEAEQQEAAVQITHYLNSLMCMVSEHFTSLESM
KAEISEIRDRSSVMGGRYKHNQQLEELRNLQDRMVHEKRAWQKEKEAMEMEMESKKKQMA
KTQAEIDRGLKDVKEQRDQLYRKLDLLKGQGIEIMGPNMSVLKTEPPPNQSSHHQADVLF
YSEVSSAENTFPRMNSASSASFRSTGNSMVHLNAAVSNPSLVANSVGSGGSLTKKDLIGG
HSNLAHEGKGDKSEIKQQIPVKLSSKLSVQGGSSKEKGTKKMSSVANLGKQNSLASSSLL
STSMGNIAKPIVEGGVQQILPFKLSEKNLGSSSSNSSERRTSPKPGYQKLTSVPSPPSSQ
DPGGGGPPIEISHQRTGSSPAQMNPPPRTTSSNSGSGTTSNNTLPKVSSGQKIDYNEDQV
MYF
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atgagtggacgattggcccagcccgtcccggccccgcctccccgagccccgctcccaccc
ccgcccatcattctctcctcagatgaagcccccgatacgggcgaggagagcgatgaggac
ctcatcaccagttacttgggcggaggcggtggggggccggccagcccagccacccgccta
cccgcctttcccgatgtattaccccaccacgccccgtccggcgacccgccgcatcacatt
ttggccgacaatctgctccagttggccgagattcatgaaaacattcaacggatgcgacta
gccaacacggagggtcccagtcgaccgccgcgatcgcaccgcgctccacgccccgagtcg
ctgcatcagcgatggtccacctcgtgccccgccttaaaccatgaggccgcgctcgatgtt
gtcggtggggccgtacccgccggcagtttcgacagcgggccctcgcccgagtcgccgtct
catccggtgccttactattcgaccaccacgcccacctcctcgaccagtcacaccgggcgc
tcgcaccggaaacgctggccgggggcctggtcgtccggttccaccaccgaaggccccaag
catcggggcaaaacccgcccgggtcgacctcggagctactccgcgtccagtaatgactcg
gacgatccgttcggtcaaccatcgggcgattacgtcgacggctgtttgggcggcggccac
ggctcgcaaccccgtctgcgttccgcctccaccgtggccactacccgaggtagtttgggt
aatgaatccaactacggtggcccgccatcgggtccgtccagtcatcgaaccccggagaag
ttgttacccagaccaccggttggcactcgttacacgcccaatattttctcacagttcccc
gggttgcataaatccatctccacgccctccattgcaacggaccatcctcacagtcgaagt
gctcatcgaaaaggacgcgactaccccgagcccacgcatgtgttcttgcagaaattgatt
tcggaacacgaatggacccgacgtagcggaagcgatagtgatagtgatgacgagcctcaa
gggccgccccctagcgggttactgcccgaaatcgaggggcgacgtcaacatcatagagtc
cccttccccctggaaccatccgttccagctgctcacccctcagttcagcccgctccttcc
ccacagatttccttggccgagttcttgcaggatgtgcccaatctagaagacgacgaccaa
cggaagcggcgtcggaagaaggaacggtcaagcatcttcttccgtaagaagaaagacaaa
tcaaaatctgcatccgcctccctccaaacccaacctgatggccacttgaagagcctagcc
aaggctccgtcggctataagtttgtccacgaaaccattgcagacccgggtgcctcaacat
agttacagcatgtccagtttacggaagccctcgtcgcacaatcattatgcgggcaatttc
tatcatgccaggggtgaaatgagtaaggtaaatcacgaggaccgcgatgattatggagtc
caagaagacaccactggacttattgagggtgaatatgtgcctggagaggaattttccgaa
ggtggacccgctgctattcggaatttggaaacagatccctttctcaggattcaggatgaa
gaagccgaatcatggcagcaagcctggaaatcccaagaccttcaaggtctcactccgacc
caaatcaagcggcaagaacacatctatgagctaatcgtcaccgaaagcaaccattgtcaa
gtactgaaggttatccaaaagatatttgtggaagggatgtacaaatacctgaacatacct
cccgagattgtggatcggatctttccgtgcattgaagagctaattgagatccactttaag
ttcttggagcaacttcgaatacgacaaaatgctcaaccagtggtagaaagtgtggccgac
ttgctcttggagcaattcgccggggaatcctcaaaactttggaaagaggcttatggcaca
ttttgtagccaacatagtgatgctgtgtccttatataaggacatttacaaaagtgatcgt
cgattccaacaatttattcgccattgtgccaacaaccccttactgaagaagaaaggcatc
cccgagtgcattctatttgtgaccacacggatcaccaaataccctctcctcatcgaacct
ctcatcaaaacagcccgggatcttccccaagaacaacaaaagctccgcgatgctagttta
tttgtcagggacattctcaaagacgtgaatgcgaaagtggccgaaaaagagcgagagcag
cgattcctcgagatctataaagggattgatgccaaatcgtgggtgctctatcaaggcaag
aaattcaagaagtctgatatcctctctgaatcgaggaagctcatgttcgaaggactagct
gtgcttcatcaaggccgtggtcgaagcctttcggtgaccgtggtcgtgctttcagatatc
ctcttttttctccaagagaacagtcagaaatatcacttcaccacacccgagggaaagccc
ggggttattcccgttcacaccttgatcgcacgcgagaagaccggtccaagtacaaaggcg
ttgtatttgatctcaacgtctgagcgcgatccggaaatgttcgagctggagattcaacaa
ccacccaccagagatgactggatcactggtattcgcgaggcagtggatgcttgctcgtat
gggtcggattccgagggaggcgtaagctccaatgtcctagaagcgaggcgtaatgtcgag
gccaagtacatgaggatgcgtcatctgacggctgaacttcgtggtaaagatattgagctc
gcacgtctgctcgaggacaaaatgcgggtcatgggtgatatgctcgtcgtcttgggcacc
cctaacccgttcaaggacagccctccggattatttaagcttggtacgcgaaaaggattcg
cattgcaccaaggaagatctgctcaacgctgttcaagaggcgagtcgtctagctagctcg
ttgtactcgtcgggttcaaatctctctcggagtgtcagctcggcgggtgaaaagcatagt
gtgacctatgcctcgcctactcttcccaaacgggcagagaccttcggaggatttgatcaa
caacagccaacgctcccgatgggtttgatccagcaacctcctgaatcgctcccggctcaa
agtcaggagtccctgaggtcttccaagccggacgaagccaatccatggcgtggcttgccc
tctgttcctcccttgttgaatctggaagccgagcaacaagaggctgctgtccaaatcacg
cactatctgaatagtttgatgtgcatggtctccgaacattttaccagcctagagagcatg
aaagccgaaatatccgagatccgagatcgatcatccgtgatgggtggtcgctataaacat
aatcaacaattggaggagctcagaaatcttcaagatcgaatggttcatgagaaacgtgca
tggcagaaggaaaaggaagccatggagatggaaatggaatcgaaaaagaagcaaatggca
aaaactcaggccgaaattgatcgtgggctgaaggatgtcaaggagcaacgtgatcagctc
taccgcaaacttgacctgctcaaagggcaaggcatcgagatcatgggtccaaatatgtcc
gtcctcaaaaccgaaccaccgcccaaccaatctagccaccatcaagccgatgtgttgttc
tactcggaggtgtcttcggccgaaaacactttccccagaatgaatagtgcctcgtcggcc
tcgtttcgatccacggggaactccatggtgcacctgaatgcggccgtatcgaatccgtcg
ctggtggccaattcagtgggatcgggtggaagcctcaccaagaaggatctgattggcggc
cattcgaacctcgctcatgaaggaaagggcgacaaatccgaaatcaaacaacaaatcccg
gtcaaactgagttccaaactctcggttcaaggaggctcttctaaggagaagggtaccaaa
aagatgtcctccgtcgcaaatttgggcaagcaaaattctttggccagttcctctcttctg
agcacatccatgggcaatatcgccaaaccgattgttgagggtggtgtgcaacaaatcttg
cctttcaaactgagtgagaagaacctgggttcatcatccagtaattcatcggaacgcaga
accagtcccaaacctggctaccaaaagctcacttccgtgccaagtcccccatctagccaa
gatccaggtggaggaggacctccaattgaaatctcccaccagcgtacgggaagctctccg
gctcaaatgaatcctccccctcgaaccacctcgagtaattcggggagtggcacgacgagc
aataacacccttcctaaagtgtcctcgggccagaagatcgactacaacgaagatcaggtc
atgtacttctga
DBGET
integrated database retrieval system
