Tigriopus californicus (tidepool copepod): 131879989
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Entry
131879989 CDS
T09700
Name
(RefSeq) sorting nexin-2-like
KO
K17917
sorting nexin-1/2
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
131879989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131879989
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tcf04990
]
131879989
Membrane trafficking [BR:
tcf04131
]
Endocytosis
Macropinocytosis
Sorting nexins
131879989
Domain-containing proteins not elsewhere classified [BR:
tcf04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
131879989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
BAR_3_WASP_bdg
TRPM_tetra
HrpB7
BLOC1_2
AIF_C
Motif
Other DBs
NCBI-GeneID:
131879989
NCBI-ProteinID:
XP_059082462
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All DBs
Position
5:2154605..2163454
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AA seq
595 aa
AA seq
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MSVEPPPLNPMVDEDEDDDDDLFKSAISGPTPALQVKSQAHEDEDSSGYHTHAAMERSDT
LEDVNLNEDSGSSPEKVEILATASPGPVEPEPSKKLGVDLAQIRLSEHEIGASPDVSREA
SQEPEHFGHDDDDDEEEEDNPFHDTHLNLSGAVGSRSQVENGPTHERSNGGQVNGSNGAQ
SNVMEPLDPTEMDELEGGDDFIQVSVTEPHKVGDGMTSYMVYKVSTKTSFNFFRSKELSV
NRRFSDFLGLHDKLSEKYLQNGRIIPPAPGKSVIGMTKLKMTAKDGGANGEDLSTPQNPN
NDEFVERRRAALERYLNRTVAHPSLRADPDLREFLELPTELPKSNQTSTLSGKNVMRFIS
KSVDRVTNMTLKMEETDEWFEEKNHSIEQLDQHLRKLHSATESLHEYRRTLAYHTGVLSK
SLAVLSGLEENTELSGALAHLSGVQEKVEHVHGEQASADFYLLSELIKDYIGLVGAVKDV
FQERIKAWQHWQNASVALTKKREAKAKAELQGRQDRVAVLREEIVDQERQQDMAQENFKT
ISRLIKKEVEQFDVRKAQDFKKGIIGYLQVMLKSQEDISKHWEQYLPEIKQISHN
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggagcctccccccctgaatcccatggtcgacgaggatgaggacgacgacgac
gacttgtttaaaagcgccatctcgggccccacccccgccttgcaggtcaaatcccaggcc
cacgaggacgaagattccagtggctaccatacacatgcggccatggaacgatcggacacg
ctggaagacgtgaatctgaacgaggatagcgggtcgtcgccggaaaaggtcgagattttg
gccaccgcttcccctgggcccgttgagcccgagccttcgaaaaagttgggcgtggacttg
gctcagattcgcttgagtgagcatgagatcggggcgagcccggacgtgagccgagaagcc
tcacaagagcccgaacattttgggcacgacgacgacgacgacgaagaagaagaagacaat
ccgtttcatgatacccatttaaacctgtccggagctgttggatctaggtctcaagtggaa
aacggtcccactcatgaaagaagcaatggaggtcaagtgaatggctccaatggagctcaa
tccaacgtgatggagccattggaccccacggaaatggacgaactcgaagggggcgatgac
ttcattcaagtatcagtcaccgagcctcacaaggttggcgatggaatgacttcctatatg
gtttacaaggtgtccaccaagacctcattcaacttcttcagaagtaaggaattatccgtc
aatcggaggttttcggacttcctcggactccatgacaaattgtcagagaagtaccttcaa
aatggccgtattattccgcctgcccctggtaaaagtgtcattggaatgaccaaactgaaa
atgactgccaaagatggaggagccaacggtgaagatctgtctactccccaaaatcccaat
aacgatgagtttgtggagcgacgtcgtgcagcccttgagcgctatttgaaccgcacagtg
gctcatccctcattgcgggctgatccagatctgagggaatttctggaacttcccactgaa
ttacccaagtccaaccagacgtcgactttgtcgggaaagaacgtgatgaggttcatttcc
aagagcgtggaccgtgtgacaaacatgacactcaaaatggaagagaccgacgaatggttt
gaggagaagaaccacagtattgagcaactggatcaacacctgaggaaacttcactcagcc
accgaatcgttgcatgaataccgaagaacattggcgtatcacacgggcgtattatcaaag
tccttggccgttttatccggattggaagagaacaccgagctttcgggggctttggctcat
ctatctggggtccaagaaaaagtggaacacgttcatggcgagcaagcctctgccgatttc
tacctgctctccgaactcatcaaggattatatcggattagtgggcgccgtcaaggacgta
tttcaagagcgaataaaagcctggcaacattggcagaatgcctctgtggctttaaccaag
aagcgcgaagccaaggccaaggctgagctccaaggacgccaggatcgcgtggcagttctg
agggaagagatcgtcgaccaagaacgtcagcaagatatggctcaagagaacttcaagacg
atatcccgcctgatcaagaaggaagtggagcagttcgatgtacggaaggctcaggatttc
aagaaagggatcattgggtacttgcaagtgatgttgaagtctcaggaggatatctccaag
cattgggagcaatatctgcccgagatcaagcaaatcagtcacaattga
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