Tigriopus californicus (tidepool copepod): 131880072
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Entry
131880072 CDS
T09700
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 1-like
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
131880072
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcf02000
]
131880072
Transporters [BR:
tcf02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
131880072
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
131880072
NCBI-ProteinID:
XP_059082563
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Position
5:255217..257735
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AA seq
640 aa
AA seq
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MMATEQTPLKKTPKDREKWGNQCDFFLSCLGYAVGLGNVWRFPYLCYQHGGGSFLVAYVS
MLLLTGLPLFTLELSLGQYSSIGPSQIFKKLCPASKGVGWAMVSVSLLIALYYNQIIAWA
LFYMYEGLAWELPWKFCGKDFNSIGCFTVIQNEACLNASNGVEVFWNNTCYIQAEVCETS
GLDFYNLTHCQERKDGGAFLKLTTVMQRKTASEDYFTRRVLGLRDDSSWDNMGSLQTHAV
VSLVGAWALVAVCMLNGIQTSGKVVYFTALFPFLVLLLLFVRGLTLDGAYDGILFYVTPH
WDAMWAPQMWADAATQIFYSLGTTMGGLVTLASYNRFNNNCLRDALIITSSNCATSIFAG
FVIFSIVGFMAKELEVPISEVIQSGPGLTFVAYPDAVTRLPGSAIWSFLFFMMILTLGLD
TQFAMTETVTTAIMDQWPQTRRHKTWVVLGACSLGLAFGLLMCLNGGIFVFQLFDWYSAS
WNLMLVGFLEIVIVMVCLGYQGVMNNLAEMQVQIPLVLRFYYGLTWRCLTPLSLAGIFTF
TLVKFAPCYYEDYVFPHWVQSMGYGIFALTLFVVPLLFLHEGCTNGFNRTLFQSVGWSPP
TEDEDDSSNSEGTDYNNCKGEEGVANLAFRCDETSRIATK
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgatggctacagagcaaacaccgctcaagaaaacgcccaaggaccgggaaaaatggggg
aaccagtgtgacttttttctttcttgtctcggatatgcggttggtttgggcaacgtgtgg
cgattcccatatctttgttatcaacacggcggtggcagtttcttggtggcctatgttagc
atgctccttctcactgggctgcccttattcaccctagagttgagtttgggtcagtactcg
agtattggaccgagtcagatcttcaagaaactatgtccggcttctaagggcgttggatgg
gccatggtttcggtgtctcttctgatcgccttgtactataatcagatcatcgcttgggca
ttgttctacatgtatgaaggcttggcctgggaattgccatggaagttctgcgggaaggat
ttcaattcgatcggttgcttcacagtcatccaaaatgaagcgtgcttaaatgcttcaaat
ggggttgaggttttctggaacaatacttgctacatccaggctgaagtttgtgagacctct
ggtcttgacttctacaacctcacccactgtcaagagagaaaggacggcggtgctttcctc
aagctcaccactgtcatgcaaagaaagacggcctcggaagattatttcacccgcagagtt
ttgggtcttcgagatgattcctcgtgggacaacatgggatcgctccaaacacatgcagtg
gtatcattggtcggagcctgggccttggttgccgtgtgcatgttaaatgggatccaaacc
tcgggcaaggtggtctacttcacagccttgtttccgtttcttgttttgctcttacttttt
gttcgcggattaactctggacggagcttatgatggaattcttttctatgtgactccacat
tgggacgccatgtgggcaccgcaaatgtgggctgatgcggccactcaaatattttacagc
ttggggacgaccatgggtggtttggtcaccctggccagttacaaccggttcaacaataat
tgtctccgagatgcattgatcattacctctagtaattgcgctacttctatctttgccggc
tttgtcatattctccattgtgggtttcatggccaaagagctggaggtgcccatttcagaa
gtgatacaatctggaccggggttgacttttgtggcttatccggatgccgtgacacgatta
ccagggtcagcaatttggtcattcctgttcttcatgatgattctgaccttagggctggac
acccaattcgccatgactgagacggtcaccaccgccattatggatcaatggcctcaaacg
cgacggcacaaaacttgggtggttttgggggcttgttcattgggtttggcctttgggctt
ctgatgtgtttgaacggcgggatctttgtattccagttatttgattggtattctgcttcc
tggaacctcatgcttgtgggtttcttagaaatcgtcattgtcatggtttgccttggatat
caaggtgtaatgaacaatttagcagaaatgcaggttcaaattccgttagtcttaaggttc
tactatgggctaacatggagatgtttgacgcctttgtctttagctgggatatttactttc
actctggtaaagtttgctccatgctactacgaggattatgtgttcccacattgggtgcag
agtatgggctatggcatttttgctctgactttgttcgtggtgccgctcctatttctccac
gagggatgcactaatgggtttaatcgtacactatttcaaagtgttggctggtctcctcct
acggaggacgaagatgattccagcaactcggaaggaaccgattacaacaactgcaaaggg
gaagaaggcgttgccaatttagctttccgttgtgatgaaacatctcgaattgcgactaaa
taa
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