Tigriopus californicus (tidepool copepod): 131880129
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Entry
131880129 CDS
T09700
Name
(RefSeq) tubby-related protein 4-like
KO
K24720
tubby-related protein 4
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tcf04990
]
131880129
Domain-containing proteins not elsewhere classified [BR:
tcf04990
]
Other domain-containing proteins
Tubby family proteins
131880129
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
ANAPC4_WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WD40_Prp19
SOCS_box
Beta-prop_HPS5
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
131880129
NCBI-ProteinID:
XP_059082634
LinkDB
All DBs
Position
5:complement(5859386..5875273)
Genome browser
AA seq
1441 aa
AA seq
DB search
MHLHWERSTNTAGDCNIRSMSWMGRVPDEIPQDEGWKLNRVNYYQEGWLSTANLRGVVGV
TYTTSHCGLLGTVDEDEKGVEPPQRTNYNLRGHLFEVTFVCWNEPYQKLATCDTSGVIFV
WIKYEGRWSIELINDRHTPVICFSWSHDGRMALICYQDGFVLVGSVAGQRYWSTILPIET
QQVTSGTWTPDDQFVYMGTSQGEILVMDLTGNMVNRVVQKVGVPIVELAWNCERFNMEEQ
NETATHPKGKRPDGSSHLLAVCHKDGEIHLIHSYDDIIPQVFNCGFQEYLVDWTNSGEIL
AVTGKERELTCKADHSFTYINSVLFYNDRGALIYKVQVPSDKSPVTAMTWGHNDKRLFVA
TGNQIHVAWVSHHIASLQLLSRLKVQRTLANADQVQLLPLPCRIQNLIGLLFTCTIRSSV
PNPQNLRDFAIRPHPENVRLYCTMVRHGGDENVGSSYTLYLEHLGGFLPLLKGKKVSKLR
PDFVIYDPAMSEENAQVWTYMPANHFTRRGISLSDPNEVEFDGDALSLRGQSSAVGSGAA
RLGNNQGSPRNRRRQQRRLPQGSSVQSRRRTGSSERNSLIENTECVNLLPEDERLAEVTS
NFWGTKFQITSGNFHLLPLSLGEVTYKASLLHLQPRQMRLEIIDLLDDHRDPFGSAFNLD
DDENEESDLEDSEFDQGVVMKDDILRAVKANANKSSESSTHDLDSDSTGLSNMNIAPIAP
LPTRLSFCLTPRNMSAAATPCANNESTICEAILKEETDDHTQPIKVQRNVTNRKLRKSPV
KTVVGQVLAKVEGIPLSQSDAILEDIHDSMEPVPSTSNATGQAMSMALGNLGSPTSSPSK
RLLRMSVSCDNYLSEAKFALSRRDSVGSGSPHSSKGSPRRWAAKADEITRETDMATVDQV
MAKSLNLADLTPTNPWHSNSANELDMIVDLLGVPSDLLGHQDLSKRLILLGDKKPKSKVS
LDKIGKSASCDDEEYPKVTIVNGQKVVRRRRKKRLASEADKKRIEVKRQSIYAKNCRGRS
ETKSCQNCDAIAMAINDADLNKEIFDVPSKTKANLLDSSDTEDNIQVQVEDPVVLPKADF
SEKAAHNGASLGLEQIKENIPSARQSREPRRFDGVRNILEKARGILLASSRFRSRSKSKE
SPQETSTTRRDSSVDITLHLSEDPPKTTTKSKRFRTSNLWSRGLSRGREDEQVATVVQNG
TQSSPNTPLQMRKARNRSFSPVRALLNSPLLRRKKIPHPQTDSSEEDLVDCAGPRSSHQN
QPPECANNGEEFRNLETFQKQKLKDKLKRINQPEPPGSIRPSRKNSTSNLNPTPSSTPQF
LSPFLSRRGLALRSPNLSLSSRRDYLRNLSAPPPVKVRKRRKLVLRNKSPMWNDTSQVYQ
LDFGGRVTLESAKNFQIEYKDTQVMQFGRIDTNAYTLDFQYPFTAIQAFGVALANVTQRL
K
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgcattgggagcgttccaccaatacggctggggattgcaatatccggtctatg
tcttggatgggtcgggtgcccgatgaaataccgcaggacgagggttggaagctcaacaga
gtcaattattaccaagaaggctggttgagcacggccaatctaaggggagtggtgggcgtg
acttacactacatcgcattgtggtctcttgggaactgtggatgaagatgaaaaaggtgtg
gaaccacctcaaagaacaaattacaatctccgaggtcatctttttgaggtgacctttgtg
tgttggaacgagccttatcagaagctcgccacatgcgacacgtccggcgtgatttttgtg
tggatcaaatacgaggggcgttggtccatcgagctcattaacgacagacacacacccgtg
atttgtttcagttggtcgcatgatggcaggatggccctcatctgttatcaggatggcttt
gtattggttggctcggtggctggacaacgatattggtccacgattcttccgattgaaacc
caacaagtgaccagtggaacgtggaccccggatgatcaattcgtgtacatgggaacctcg
caaggtgagatcttggtaatggatctgactgggaacatggtgaatcgagtggttcaaaaa
gtgggtgttcctatcgtggaacttgcttggaattgcgagcgattcaacatggaggaacag
aacgagaccgcaacacatcccaagggaaaacgaccagacggaagctcccatctcctcgct
gtttgccataaagatggagagatccatttgatccacagctacgatgatatcatcccacag
gtgtttaactgcggattccaagaatatttggtcgattggaccaacagcggagagattcta
gcagtgaccggcaaagaacgagaactcacctgcaaagctgatcattcgttcacatacatt
aactccgttctcttttacaacgaccggggagcccttatctacaaggtccaagtgccctcg
gataagtctccagtgacggccatgacctggggccataacgacaaacgactatttgtggcc
accggcaatcagatccacgtggcttgggtctcccatcacattgcctcacttcaactcttg
agccgactgaaggttcaaagaaccttggctaatgcagatcaggtccagcttttgccgctc
ccttgccgcattcaaaaccttatcggccttttattcacttgtacaatcaggtccagtgtt
ccaaaccctcaaaatcttcgggattttgcaatccgaccacatcccgaaaatgtgcgattg
tattgcacgatggttcgtcatggaggcgacgagaatgtgggaagttcctatacgctgtat
ctggaacatcttggagggttcctacctttgctcaagggaaagaaagtcagtaagctgcgg
cctgacttcgttatttatgatcccgccatgtcagaggaaaatgcccaagtatggacgtac
atgcctgccaaccatttcactcgacgaggaatttcattatccgatcccaatgaggtggaa
tttgacggggatgccttgtcattgcgaggacaaagctctgccgtgggaagtggagctgcg
agacttggtaataatcagggaagtccaagaaatagacgaaggcagcaacgaagattgccc
caaggctcctccgttcaaagccgacgaagaacgggaagttccgagcggaacagtttgatc
gagaatactgaatgtgtgaacctgttgcccgaggacgagaggctggctgaggtcacgtct
aatttctggggtactaagttccaaattacctcgggcaatttccatctgctccctttgtcc
ttgggcgaagtgacttataaagccagcttattgcatctccaaccaagacagatgagatta
gagatcatagacctactggacgaccaccgggatcccttcggatcggcgttcaatctcgat
gacgacgagaatgaagagtccgatctggaagacagcgaatttgaccaaggtgtagtgatg
aaagacgatattctcagagctgtcaaggcaaacgctaacaagagctcggagagctcgacc
cacgatcttgattcagactccactggtctttccaatatgaatattgctccaattgcccct
cttccaactcggctctcgttttgcctaacaccaaggaacatgagtgccgcagcaacccct
tgtgccaataatgagtccaccatttgcgaggcaattctcaaggaagagactgacgatcac
acccaacccatcaaggtgcagagaaacgtaaccaatcgtaaactacgaaagagcccagtg
aagactgttgtgggccaagttcttgccaaagtggaaggcattcctttgagccagagtgat
gccatcctggaggacattcatgactcgatggaacccgttccttctacttccaacgcaact
ggtcaagccatgtcgatggcattgggaaatcttggtagcccgacatcttcaccctcgaaa
aggctacttcgaatgtctgtgagctgtgataattacttgagtgaggccaagttcgctttg
agtcgacgtgattctgtgggatctggtagtcctcactcttccaaaggctcacctcgtcgg
tgggctgccaaagctgatgagattacgagggagaccgacatggccactgtagaccaggtc
atggccaagtcgttgaatttggcagatctgactccgacaaacccttggcatagcaattca
gctaatgaattggatatgattgtagacttactaggcgttccaagtgatctcctaggccat
caagatcttagtaagaggttaatcttgcttggggacaagaaacccaagtccaaggtcagc
ctcgacaagattggcaaaagtgcaagttgtgatgatgaagaataccccaaggtgaccatt
gtcaacggtcaaaaagttgtaagaagacgtaggaagaagagattggcatcggaggcagat
aagaagaggatcgaggtcaagcgtcaaagcatatacgccaagaattgcaggggtcggagt
gagaccaaatcttgtcagaactgcgatgccatcgcgatggcgattaacgatgctgatcta
aacaaagagatctttgacgtaccttccaaaactaaggccaacttactggattcttccgac
accgaggataatattcaagtccaagttgaggatcccgtcgtgcttcccaaggcggatttc
tcagagaaggctgcccacaatggtgcttccttgggtttggaacaaatcaaggagaacatc
ccgagtgccagacagtccagagaaccaagaagatttgacggggtcaggaatatcttggaa
aaagctcgaggcatattgcttgcatcttcaagatttcgaagccgatccaaatccaaagaa
tcccctcaagaaacctcgaccactaggcgagattcctctgtggacataacgttgcatttg
agcgaagaccctcccaagacgacgaccaagtccaagagatttagaacgtctaatctctgg
tcaagaggcttaagtcgaggccgtgaagacgaacaagtagctaccgttgttcaaaacgga
actcaaagcagtcccaatactcctttacagatgaggaaagctaggaacagatcgttttcg
cctgtcagagcccttttgaattccccattgctccgacggaaaaagattccccaccctcaa
actgattcctctgaggaggatcttgttgattgtgcaggaccgcgaagttcgcatcaaaac
caacctcccgagtgtgccaacaatggggaagaattccgtaatctggagacgttccagaag
caaaaattgaaggataagttgaagcgaattaaccagccagaaccacccggatccattcgt
cctagtcgcaagaattccacgtccaatctcaatccgacgccaagttcaacgccacaattt
ctcagtccatttttgtcccgccgtggattggccttgcggtcgcccaatctttccctgtcc
tcccgtcgagattatttgcgcaacttgagcgccccaccccccgtgaaagtgagaaagcgt
cgaaagctcgtgttgcggaacaaatctcccatgtggaacgataccagtcaagtttaccaa
ttggattttggaggccgagtcaccctggagtccgccaaaaatttccagattgaatacaaa
gacacgcaggtgatgcaattcggaaggatcgacacgaatgcttacacattggatttccag
tatccattcactgcaattcaggcctttggcgtggccttagccaatgtcacacaacgattg
aaatag
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integrated database retrieval system
