Tigriopus californicus (tidepool copepod): 131880188
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Entry
131880188 CDS
T09700
Name
(RefSeq) trafficking protein particle complex subunit 10-like
KO
K20307
trafficking protein particle complex subunit 10
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131880188
Membrane trafficking [BR:
tcf04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
131880188
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
Ig_TRAPPC10
TRAPPC10
Foie-gras_1
NTS_TR130
ARM_TT21_4th
Integrase_DNA
Motif
Other DBs
NCBI-GeneID:
131880188
NCBI-ProteinID:
XP_059082714
LinkDB
All DBs
Position
5:complement(626222..709779)
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AA seq
1356 aa
AA seq
DB search
MATARSTVARAQLKPSLSLDPTGFPPADSPSGDNAKKTIITVSGQASIVEKLTPGLSGGL
STEAVEWKRSYGRATKIVNLDADFLPLDPERVQLNARHLRDIPVLHTFWIECPDLDTFKA
SVKDEILQWITMLRKCGVGQDWMVTIVEPADVRKTSKLLARTSVLDKLKQDVGGRQPDRC
CSLIVNDGLVRFRLLPKYPTKNDSRAAESWQTLLHKVRVLALQGYNRVLGKFEENMRSER
ERRNDPNWNFCDYFLLQEELAFTYEMLGVYDEALVQYDELDALFTQFILNSNVTESPLWL
QRLAESCSNWSGLSLNPVVNHVLRNVIVSKNPSLLDLRNYLFSRQCAMILKVHNPLEMAK
RSLSFLHNSVQEINILELSFPKGSIACWVFLSCLEILLTYEKYSDSSNRIQLYCLHTASL
WEYARSKLLELGNLCGLMPNMEPSSKQIHRVVELSSGIRDDHYVSVDRKGRNPIEKLKEA
LSSKQAFQKYYLELSELAISTYKQIGRIRSARYIGIDLAKFYLLLEQIPQATTFLLDALK
TFQGEGWDPLEWQTLTEVAHCYRKLDEKEKLVRTCAQIAAFKAMNQPEDKEEVERGREEK
DDQTGAAPEIRMKTGGARCSVSPLNNKTNETEDEDNAGERMNFFKELLALAEQIPTEVNI
DACPNMVKIVSCQITNRSSTALKVISGAEVTLALEVFSNFPDEIQCDEIAVALAHTEPLP
VALVLEAEKKKLRKTHSGGAKRTLSNSSTSSMGAKGSNSGRSTPMLSGEDAAASQESLND
LSEESHRLVIMEQFDRKQDKTLAATRLLCRNAAQVLKRKDSSGMILRDGNIKKSDFTFAF
RLTQVSLKPGRNRFELNTVAGPVGKYDLSQLSVQHKKLNFIVANLKESLSKSFSVISELP
SMNINTSLGELLCGVKEIVTLSIATGSQTIQKGTVLKVTCSRGLKGQQTEEAEPLKGTEE
LQSQFEIVLPEGNPFEVLQVRLTLLAELPVATSSIVVKDNKGQNWIQSVSDHLIRIDNIW
KSPGNDVVELPLHFIRPFHVSVRLTTSYAKKIVEISVVGDCAKATWFEISNPGLILMNGD
KDEIKGISLEAICGGEDSYEISKDGSCTFFYDLNIAPEVETRHLPTVMKTRATLDYCRID
EISGDHLDDKRSIQIMPDFVDYTTLYILSSRILAAQGAEICRSATICSLILDLEQVSPTE
HTSIMYEVLADQAVWAVCGRAAAVIDMSSAQRQTIHVEVMPLVGGHLALPKVRLSKYIVP
QEGSGSSAKQNDKRDSSSMSKLEPFSPGQIFNASRFQRVHVLANASRKKDSTASSDQQPQ
PPSLTSLSLEMQSLSTRSLLLQSQAIGGGSNTISLP
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atggctacagccaggtccactgtggcaagggcccagctcaaaccgtctttgagtcttgac
ccgaccggatttccacccgccgactcaccctccggggataatgctaagaaaactattatc
acggtgtctggtcaagcctcgatagtggagaaacttacccccgggttgagtggcggttta
tccaccgaagccgttgaatggaagcgatcatacggacgagccaccaagattgtgaacctg
gatgccgattttctgccgctcgatcctgagcgagtccagttgaatgctcgacatctcaga
gatattccagtgctgcacacgttttggattgaatgtccggatttggacacgttcaaagcc
agtgtgaaggatgaaatcctacaatggatcacgatgctacggaagtgtggcgtcggccaa
gattggatggtcaccattgtggaaccagcggatgtgcgaaaaacaagcaaactattggca
cgaacttcggtgttggacaaattgaaacaagacgtgggtggtcggcaacctgatcgatgc
tgctctctaattgtgaatgatggtttggtcagattccggctattacccaaatatccaacg
aaaaacgattcacgagcagctgaatcatggcaaactctacttcataaagtgcgagttctt
gctcttcaaggatacaatcgggtattgggcaagtttgaggagaatatgcgatccgaacgt
gaacgtcgaaatgaccccaattggaacttttgcgactacttccttctccaagaagagctg
gctttcacgtatgaaatgttgggcgtttacgacgaggccttggtccaatatgacgaattg
gatgccctctttacccaattcattctcaattccaacgtgactgagagcccgttgtggctt
cagaggttggcggagtcgtgctccaattggtcaggactgtccttgaatcctgtggtgaat
cacgttctacgaaacgtcattgtgagcaagaacccttcgcttttggatctaagaaactac
ctcttctcgcgtcaatgtgccatgatccttaaggtccacaaccctttggaaatggccaaa
cgttccctctcattcctgcataactctgtgcaagagatcaacattttggagttgtccttt
cctaaaggcagcatcgcctgttgggtgttcctctcgtgtttggagattctgttgacgtat
gagaagtattcggattcatcgaaccgcattcagctctattgtctgcacacggcatcattg
tgggaatacgcacgcagtaaacttctcgaattgggtaatctgtgtgggttgatgcctaac
atggagccatcgagtaaacagatccatcgggtggtggaactttcctctgggattcgagac
gaccattatgtcagtgtggatcggaaaggtcgtaatcccattgaaaagctcaaagaagcc
ctctcctccaagcaagcctttcaaaagtattatttggaactctcggaattggccatcagc
acttacaaacaaataggaaggatccgctcggccagatacattgggatcgatttagccaaa
ttctatcttctcttggaacagatcccgcaagccaccacgtttctgttagatgctctgaag
acgttccagggtgaaggatgggaccctttggaatggcaaaccctgacagaagtggcccat
tgctaccgaaaactcgacgagaaagaaaaactggttcgcacatgcgcacaaattgccgct
tttaaagctatgaaccaacccgaggacaaagaagaagtggaaagagggagagaagaaaag
gacgaccagacgggggcagctcccgaaattagaatgaagacaggaggagcccgttgttcc
gtttcgcctctcaacaacaagacgaacgagactgaagatgaggacaacgccggagagcga
atgaactttttcaaagagctattggctctggcggaacagattcctaccgaggtgaacatt
gacgcctgcccgaacatggtcaaaatcgtgtcgtgtcaaatcacgaaccgctcatcaacg
gccttgaaggtaatttcgggtgccgaggtcacgttggctttggaggtgttcagcaatttc
ccggatgagatccaatgtgacgagattgcagtggctttagctcatacagagccattgcca
gtagccttggttttagaggctgagaagaagaaattacggaaaacgcattcaggaggggcc
aaaagaactctgtccaactccagtacgtcgtccatgggtgcaaaaggatctaactcgggc
cgaagcactcccatgcttagcggagaagacgcagctgcatctcaggaatcgttaaacgat
ttgtccgaggagagtcaccgtttggtcattatggagcaattcgaccgcaaacaggacaag
acgctagccgccacgcgattgctgtgtcgaaatgcggctcaagttttaaagcgcaaggac
tcgagtggcatgatcctcagggatggcaacatcaagaagtccgatttcacatttgctttc
cgactcactcaagtctctttgaagccgggtcgaaatcgcttcgagttaaacacggtggct
ggacccgtcgggaaatatgatttgagccaattatccgtacaacacaaaaagctgaacttc
atcgtggccaacctgaaggaatctctttcgaagagcttctcggtgatcagcgaactgccc
tcgatgaacatcaacacgagtttgggagaactcctctgtggagtcaaggaaattgtaacc
ctttccatcgcaacgggaagccagacgatccaaaagggcactgtgctgaaagtgacttgt
tcccgtggccttaagggacaacaaactgaagaggcggaaccactcaagggcacggaggag
cttcaatcccaatttgagatcgttctgccagaaggaaacccctttgaggtcttgcaagtg
aggctcacccttttggcggaattgcccgtggccacctcctcgatcgtggtgaaggataat
aagggccaaaattggatccagagtgtgtcggatcatttgatccgaatcgataacatttgg
aagtcccccggtaacgatgtggtggaactgcctctccatttcattcgccctttccacgtt
tccgttcgattgacgacctcgtatgccaaaaagattgttgagatcagcgtggttggtgat
tgcgccaaggccacgtggttcgagatttccaatcccggattgattttgatgaacggggac
aaggatgagattaagggcatctctctggaggctatttgcggcggtgaagactcctacgag
atttctaaagatggctcgtgcactttcttctacgatctgaacattgctcctgaagtggaa
acgcggcacctgcccaccgtcatgaagacacgagccaccctggattattgtcggattgac
gagatttccggcgatcatctcgatgacaagcgatccattcagatcatgcctgactttgtg
gactacacgaccctgtacattctctccagccgaattctggccgcccaaggggccgagatt
tgtcgatcggccacgatttgttccctgattttggatctggagcaagtatctcccactgaa
cacacatccattatgtacgaggttttggcggaccaagcggtgtgggccgtatgcggtcga
gctgctgcggttattgacatgtcctcggcccaaaggcaaaccatccatgtggaagtgatg
ccattagtcggtggtcatttggccttgcccaaggtcaggttgtccaagtacatcgtaccc
caagaaggaagtgggtcgtcagccaaacagaacgacaaacgagattcatcgtcaatgtct
aaattggagccgttctcacccggacaaattttcaatgcgagtcgattccaacgagtccac
gttttggccaacgcatcccgcaaaaaggactcgaccgcgtcctcggatcaacagcctcag
cctccgtcgctcacttctctctctttggagatgcagagcttatccacgcggagccttctt
ctccagagtcaggccattggtggtggctccaatacgatttccctaccctaa
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